data_7VEI
#
_model_server_result.job_id            HeQY4ycJKVMzq14uNoSpYQ 
_model_server_result.datetime_utc      '2024-11-25 14:54:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7vei 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":201}' 
#
_entry.id    7VEI 
#
_exptl.entry_id    7VEI 
_exptl.method      'NEUTRON DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              58.693 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NICKEL (II) ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7VEI 
_cell.length_a            79.14 
_cell.length_b            79.14 
_cell.length_c            37.779 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7VEI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    'P 4nw 2abw' 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? 
disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
metalc ? metalc1 A OD2 ASP 52 A ASP 52 1_555 B NI NI . A NI 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? 
metalc ? metalc2 B NI NI . A NI 201 1_555 D O DOD . A DOD 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.398 ? 
metalc ? metalc3 B NI NI . A NI 201 1_555 D O DOD . A DOD 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.649 ? 
#
_chem_comp.formula           'Ni 2' 
_chem_comp.formula_weight    58.693 
_chem_comp.id                NI 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NICKEL (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     7VEI 
_atom_sites.fract_transf_matrix[1][1]    0.012636 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012636 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.02647 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NI A 1 201 1 NI NI . 
C 3 CL A 1 202 1 CL CL . 
D 4 DOD A 1 301 33 DOD DOD . 
D 4 DOD A 2 302 58 DOD DOD . 
D 4 DOD A 3 303 76 DOD DOD . 
D 4 DOD A 4 304 42 DOD DOD . 
D 4 DOD A 5 305 71 DOD DOD . 
D 4 DOD A 6 306 81 DOD DOD . 
D 4 DOD A 7 307 79 DOD DOD . 
D 4 DOD A 8 308 48 DOD DOD . 
D 4 DOD A 9 309 34 DOD DOD . 
D 4 DOD A 10 310 23 DOD DOD . 
D 4 DOD A 11 311 78 DOD DOD . 
D 4 DOD A 12 312 82 DOD DOD . 
D 4 DOD A 13 313 3 DOD DOD . 
D 4 DOD A 14 314 12 DOD DOD . 
D 4 DOD A 15 315 47 DOD DOD . 
D 4 DOD A 16 316 2 DOD DOD . 
D 4 DOD A 17 317 31 DOD DOD . 
D 4 DOD A 18 318 40 DOD DOD . 
D 4 DOD A 19 319 1 DOD DOD . 
D 4 DOD A 20 320 29 DOD DOD . 
D 4 DOD A 21 321 19 DOD DOD . 
D 4 DOD A 22 322 77 DOD DOD . 
D 4 DOD A 23 323 61 DOD DOD . 
D 4 DOD A 24 324 54 DOD DOD . 
D 4 DOD A 25 325 44 DOD DOD . 
D 4 DOD A 26 326 60 DOD DOD . 
D 4 DOD A 27 327 9 DOD DOD . 
D 4 DOD A 28 328 11 DOD DOD . 
D 4 DOD A 29 329 22 DOD DOD . 
D 4 DOD A 30 330 45 DOD DOD . 
D 4 DOD A 31 331 69 DOD DOD . 
D 4 DOD A 32 332 16 DOD DOD . 
D 4 DOD A 33 333 56 DOD DOD . 
D 4 DOD A 34 334 32 DOD DOD . 
D 4 DOD A 35 335 25 DOD DOD . 
D 4 DOD A 36 336 21 DOD DOD . 
D 4 DOD A 37 337 63 DOD DOD . 
D 4 DOD A 38 338 49 DOD DOD . 
D 4 DOD A 39 339 17 DOD DOD . 
D 4 DOD A 40 340 62 DOD DOD . 
D 4 DOD A 41 341 75 DOD DOD . 
D 4 DOD A 42 342 50 DOD DOD . 
D 4 DOD A 43 343 38 DOD DOD . 
D 4 DOD A 44 344 68 DOD DOD . 
D 4 DOD A 45 345 26 DOD DOD . 
D 4 DOD A 46 346 41 DOD DOD . 
D 4 DOD A 47 347 14 DOD DOD . 
D 4 DOD A 48 348 35 DOD DOD . 
D 4 DOD A 49 349 5 DOD DOD . 
D 4 DOD A 50 350 80 DOD DOD . 
D 4 DOD A 51 351 70 DOD DOD . 
D 4 DOD A 52 352 39 DOD DOD . 
D 4 DOD A 53 353 20 DOD DOD . 
D 4 DOD A 54 354 37 DOD DOD . 
D 4 DOD A 55 355 10 DOD DOD . 
D 4 DOD A 56 356 52 DOD DOD . 
D 4 DOD A 57 357 7 DOD DOD . 
D 4 DOD A 58 358 4 DOD DOD . 
D 4 DOD A 59 359 46 DOD DOD . 
D 4 DOD A 60 360 83 DOD DOD . 
D 4 DOD A 61 361 27 DOD DOD . 
D 4 DOD A 62 362 65 DOD DOD . 
D 4 DOD A 63 363 24 DOD DOD . 
D 4 DOD A 64 364 8 DOD DOD . 
D 4 DOD A 65 365 28 DOD DOD . 
D 4 DOD A 66 366 36 DOD DOD . 
D 4 DOD A 67 367 59 DOD DOD . 
D 4 DOD A 68 368 6 DOD DOD . 
D 4 DOD A 69 369 74 DOD DOD . 
D 4 DOD A 70 370 73 DOD DOD . 
D 4 DOD A 71 371 64 DOD DOD . 
D 4 DOD A 72 372 15 DOD DOD . 
D 4 DOD A 73 373 43 DOD DOD . 
D 4 DOD A 74 374 18 DOD DOD . 
D 4 DOD A 75 375 66 DOD DOD . 
D 4 DOD A 76 376 67 DOD DOD . 
D 4 DOD A 77 377 57 DOD DOD . 
D 4 DOD A 78 378 30 DOD DOD . 
D 4 DOD A 79 379 84 DOD DOD . 
D 4 DOD A 80 380 55 DOD DOD . 
D 4 DOD A 81 381 13 DOD DOD . 
D 4 DOD A 82 382 86 DOD DOD . 
D 4 DOD A 83 383 53 DOD DOD . 
D 4 DOD A 84 384 51 DOD DOD . 
D 4 DOD A 85 385 72 DOD DOD . 
D 4 DOD A 86 386 85 DOD DOD . 
D 4 DOD A 87 387 87 DOD DOD . 
D 4 DOD A 88 388 88 DOD DOD . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NI 
_atom_site.label_atom_id         NI 
_atom_site.label_comp_id         NI 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               87.565 
_atom_site.Cartn_y               24.2 
_atom_site.Cartn_z               41.068 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        82.07 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NI 
_atom_site.auth_comp_id          NI 
_atom_site.auth_seq_id           201 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              26 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           282 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#