data_7VGY # _model_server_result.job_id Zc-aewVSQN23N-b0MjvK3A _model_server_result.datetime_utc '2024-10-11 00:23:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7vgy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":401}' # _entry.id 7VGY # _exptl.entry_id 7VGY _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 386.654 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7VGY _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7VGY _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 100 A CYS 100 1_555 A SG CYS 177 A CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 C SG CYS 126 C CYS 121 1_555 C SG CYS 154 C CYS 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf3 E SG CYS 159 E CYS 159 1_555 E SG CYS 229 E CYS 229 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7VGY _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 6 CLR A 1 401 2 CLR CLR . G 7 ML2 A 1 402 0 ML2 ML2 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . F 6 120.775 123.977 92.782 1 75.94 ? C1 CLR 401 A 1 HETATM 2 C C2 CLR . . . F 6 121.015 124.235 91.294 1 75.94 ? C2 CLR 401 A 1 HETATM 3 C C3 CLR . . . F 6 121.287 125.707 90.977 1 75.94 ? C3 CLR 401 A 1 HETATM 4 C C4 CLR . . . F 6 122.459 126.204 91.812 1 75.94 ? C4 CLR 401 A 1 HETATM 5 C C5 CLR . . . F 6 122.19 125.853 93.25 1 75.94 ? C5 CLR 401 A 1 HETATM 6 C C6 CLR . . . F 6 122.103 126.842 94.151 1 75.94 ? C6 CLR 401 A 1 HETATM 7 C C7 CLR . . . F 6 121.977 126.574 95.628 1 75.94 ? C7 CLR 401 A 1 HETATM 8 C C8 CLR . . . F 6 122.584 125.212 95.888 1 75.94 ? C8 CLR 401 A 1 HETATM 9 C C9 CLR . . . F 6 121.817 124.163 95.09 1 75.94 ? C9 CLR 401 A 1 HETATM 10 C C10 CLR . . . F 6 121.995 124.396 93.587 1 75.94 ? C10 CLR 401 A 1 HETATM 11 C C11 CLR . . . F 6 122.232 122.737 95.488 1 75.94 ? C11 CLR 401 A 1 HETATM 12 C C12 CLR . . . F 6 122.404 122.49 96.991 1 75.94 ? C12 CLR 401 A 1 HETATM 13 C C13 CLR . . . F 6 123.282 123.565 97.61 1 75.94 ? C13 CLR 401 A 1 HETATM 14 C C14 CLR . . . F 6 122.566 124.87 97.367 1 75.94 ? C14 CLR 401 A 1 HETATM 15 C C15 CLR . . . F 6 123.231 125.851 98.316 1 75.94 ? C15 CLR 401 A 1 HETATM 16 C C16 CLR . . . F 6 123.57 125.001 99.54 1 75.94 ? C16 CLR 401 A 1 HETATM 17 C C17 CLR . . . F 6 123.462 123.535 99.122 1 75.94 ? C17 CLR 401 A 1 HETATM 18 C C18 CLR . . . F 6 124.663 123.586 96.954 1 75.94 ? C18 CLR 401 A 1 HETATM 19 C C19 CLR . . . F 6 123.196 123.604 93.08 1 75.94 ? C19 CLR 401 A 1 HETATM 20 C C20 CLR . . . F 6 124.666 122.728 99.604 1 75.94 ? C20 CLR 401 A 1 HETATM 21 C C21 CLR . . . F 6 124.386 121.228 99.633 1 75.94 ? C21 CLR 401 A 1 HETATM 22 C C22 CLR . . . F 6 125.128 123.195 100.978 1 75.94 ? C22 CLR 401 A 1 HETATM 23 C C23 CLR . . . F 6 126.358 122.415 101.425 1 75.94 ? C23 CLR 401 A 1 HETATM 24 C C24 CLR . . . F 6 126.688 122.707 102.882 1 75.94 ? C24 CLR 401 A 1 HETATM 25 C C25 CLR . . . F 6 127.981 122.012 103.29 1 75.94 ? C25 CLR 401 A 1 HETATM 26 C C26 CLR . . . F 6 129.181 122.656 102.609 1 75.94 ? C26 CLR 401 A 1 HETATM 27 C C27 CLR . . . F 6 128.145 122.004 104.804 1 75.94 ? C27 CLR 401 A 1 HETATM 28 O O1 CLR . . . F 6 121.61 125.867 89.589 1 75.94 ? O1 CLR 401 A 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 28 #