data_7VH4 # _model_server_result.job_id KDQ5SODlcO_a4PErOQqftA _model_server_result.datetime_utc '2025-04-10 18:51:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7vh4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":201}' # _entry.id 7VH4 # _exptl.entry_id 7VH4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7VH4 _cell.length_a 100.574 _cell.length_b 100.574 _cell.length_c 147.831 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7VH4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression B,H,I,J,O 1 1 A,E,F,G,N 1 2 C,D,K,L,M,P,Q 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_454 y-1/2,-x+1/2,z-1/4 0 1 0 -1 0 0 0 0 1 -50.287 50.287 -36.95775 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 H N N ? 2 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 13 D ASP 12 1_555 F MG MG . D MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.83 ? metalc ? metalc2 A O GLU 125 D GLU 124 1_555 G NA NA . D NA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.137 ? metalc ? metalc3 A O PHE 128 D PHE 127 1_555 G NA NA . D NA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.588 ? metalc ? metalc4 F MG MG . D MG 202 1_555 N O HOH . D HOH 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.701 ? metalc ? metalc5 F MG MG . D MG 202 1_555 N O HOH . D HOH 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.628 ? metalc ? metalc6 F MG MG . D MG 202 1_555 N O HOH . D HOH 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.599 ? metalc ? metalc7 F MG MG . D MG 202 1_555 N O HOH . D HOH 333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? metalc ? metalc8 G NA NA . D NA 203 1_555 O O HOH . C HOH 317 6_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc9 N O HOH . D HOH 306 1_555 K NA NA . B NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc10 B OD1 ASP 13 C ASP 12 1_555 J MG MG . C MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.644 ? metalc ? metalc11 B OE2 GLU 15 C GLU 14 1_555 J MG MG . C MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.793 ? metalc ? metalc12 J MG MG . C MG 203 1_555 O O HOH . C HOH 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.836 ? metalc ? metalc13 J MG MG . C MG 203 1_555 O O HOH . C HOH 336 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc14 C O GLU 125 B GLU 124 1_555 K NA NA . B NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.995 ? metalc ? metalc15 C O PHE 128 B PHE 127 1_555 K NA NA . B NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.521 ? metalc ? metalc16 K NA NA . B NA 601 1_555 P O HOH . B HOH 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.181 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 7VH4 _atom_sites.fract_transf_matrix[1][1] 0.009943 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009943 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006764 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 ACT D 1 201 201 ACT ACT . F 3 MG D 1 202 202 MG MG . G 4 NA D 1 203 203 NA NA . H 2 ACT C 1 201 201 ACT ACT . I 5 PEG C 1 202 202 PEG PEG . J 3 MG C 1 203 203 MG MG . K 4 NA B 1 601 601 NA NA . L 5 PEG B 1 602 602 PEG PEG . M 2 ACT A 1 201 201 ACT ACT . N 6 HOH D 1 301 301 HOH HOH . N 6 HOH D 2 302 302 HOH HOH . N 6 HOH D 3 303 303 HOH HOH . N 6 HOH D 4 304 304 HOH HOH . N 6 HOH D 5 305 305 HOH HOH . N 6 HOH D 6 306 306 HOH HOH . N 6 HOH D 7 307 307 HOH HOH . N 6 HOH D 8 308 308 HOH HOH . N 6 HOH D 9 309 309 HOH HOH . N 6 HOH D 10 310 310 HOH HOH . N 6 HOH D 11 311 311 HOH HOH . N 6 HOH D 12 312 312 HOH HOH . N 6 HOH D 13 313 313 HOH HOH . N 6 HOH D 14 314 314 HOH HOH . N 6 HOH D 15 315 315 HOH HOH . N 6 HOH D 16 316 316 HOH HOH . N 6 HOH D 17 317 317 HOH HOH . N 6 HOH D 18 318 318 HOH HOH . N 6 HOH D 19 319 319 HOH HOH . N 6 HOH D 20 320 320 HOH HOH . N 6 HOH D 21 321 321 HOH HOH . N 6 HOH D 22 322 322 HOH HOH . N 6 HOH D 23 323 323 HOH HOH . N 6 HOH D 24 324 324 HOH HOH . N 6 HOH D 25 325 325 HOH HOH . N 6 HOH D 26 326 326 HOH HOH . N 6 HOH D 27 327 327 HOH HOH . N 6 HOH D 28 328 328 HOH HOH . N 6 HOH D 29 329 329 HOH HOH . N 6 HOH D 30 330 330 HOH HOH . N 6 HOH D 31 331 331 HOH HOH . N 6 HOH D 32 332 332 HOH HOH . N 6 HOH D 33 333 333 HOH HOH . N 6 HOH D 34 334 334 HOH HOH . N 6 HOH D 35 335 335 HOH HOH . N 6 HOH D 36 336 336 HOH HOH . N 6 HOH D 37 337 337 HOH HOH . N 6 HOH D 38 338 338 HOH HOH . N 6 HOH D 39 339 339 HOH HOH . N 6 HOH D 40 340 340 HOH HOH . N 6 HOH D 41 341 341 HOH HOH . O 6 HOH C 1 301 301 HOH HOH . O 6 HOH C 2 302 302 HOH HOH . O 6 HOH C 3 303 303 HOH HOH . O 6 HOH C 4 304 304 HOH HOH . O 6 HOH C 5 305 305 HOH HOH . O 6 HOH C 6 306 306 HOH HOH . O 6 HOH C 7 307 307 HOH HOH . O 6 HOH C 8 308 308 HOH HOH . O 6 HOH C 9 309 309 HOH HOH . O 6 HOH C 10 310 310 HOH HOH . O 6 HOH C 11 311 311 HOH HOH . O 6 HOH C 12 312 312 HOH HOH . O 6 HOH C 13 313 313 HOH HOH . O 6 HOH C 14 314 314 HOH HOH . O 6 HOH C 15 315 315 HOH HOH . O 6 HOH C 16 316 316 HOH HOH . O 6 HOH C 17 317 317 HOH HOH . O 6 HOH C 18 318 318 HOH HOH . O 6 HOH C 19 319 319 HOH HOH . O 6 HOH C 20 320 320 HOH HOH . O 6 HOH C 21 321 321 HOH HOH . O 6 HOH C 22 322 322 HOH HOH . O 6 HOH C 23 323 323 HOH HOH . O 6 HOH C 24 324 324 HOH HOH . O 6 HOH C 25 325 325 HOH HOH . O 6 HOH C 26 326 326 HOH HOH . O 6 HOH C 27 327 327 HOH HOH . O 6 HOH C 28 328 328 HOH HOH . O 6 HOH C 29 329 329 HOH HOH . O 6 HOH C 30 330 330 HOH HOH . O 6 HOH C 31 331 331 HOH HOH . O 6 HOH C 32 332 332 HOH HOH . O 6 HOH C 33 333 333 HOH HOH . O 6 HOH C 34 334 334 HOH HOH . O 6 HOH C 35 335 335 HOH HOH . O 6 HOH C 36 336 336 HOH HOH . O 6 HOH C 37 337 337 HOH HOH . O 6 HOH C 38 338 338 HOH HOH . O 6 HOH C 39 339 339 HOH HOH . O 6 HOH C 40 340 340 HOH HOH . O 6 HOH C 41 341 341 HOH HOH . O 6 HOH C 42 342 342 HOH HOH . O 6 HOH C 43 343 343 HOH HOH . O 6 HOH C 44 344 344 HOH HOH . P 6 HOH B 1 701 701 HOH HOH . P 6 HOH B 2 702 702 HOH HOH . P 6 HOH B 3 703 703 HOH HOH . P 6 HOH B 4 704 704 HOH HOH . P 6 HOH B 5 705 705 HOH HOH . P 6 HOH B 6 706 706 HOH HOH . P 6 HOH B 7 707 707 HOH HOH . P 6 HOH B 8 708 708 HOH HOH . P 6 HOH B 9 709 709 HOH HOH . P 6 HOH B 10 710 710 HOH HOH . P 6 HOH B 11 711 711 HOH HOH . P 6 HOH B 12 712 712 HOH HOH . P 6 HOH B 13 713 713 HOH HOH . P 6 HOH B 14 714 714 HOH HOH . P 6 HOH B 15 715 715 HOH HOH . P 6 HOH B 16 716 716 HOH HOH . P 6 HOH B 17 717 717 HOH HOH . P 6 HOH B 18 718 718 HOH HOH . P 6 HOH B 19 719 719 HOH HOH . P 6 HOH B 20 720 720 HOH HOH . P 6 HOH B 21 721 721 HOH HOH . P 6 HOH B 22 722 722 HOH HOH . P 6 HOH B 23 723 723 HOH HOH . P 6 HOH B 24 724 724 HOH HOH . P 6 HOH B 25 725 725 HOH HOH . P 6 HOH B 26 726 726 HOH HOH . P 6 HOH B 27 727 727 HOH HOH . P 6 HOH B 28 728 728 HOH HOH . P 6 HOH B 29 729 729 HOH HOH . P 6 HOH B 30 730 730 HOH HOH . P 6 HOH B 31 731 731 HOH HOH . P 6 HOH B 32 732 732 HOH HOH . P 6 HOH B 33 733 733 HOH HOH . P 6 HOH B 34 734 734 HOH HOH . P 6 HOH B 35 735 735 HOH HOH . P 6 HOH B 36 736 736 HOH HOH . P 6 HOH B 37 737 737 HOH HOH . P 6 HOH B 38 738 738 HOH HOH . P 6 HOH B 39 739 739 HOH HOH . P 6 HOH B 40 740 740 HOH HOH . P 6 HOH B 41 741 741 HOH HOH . P 6 HOH B 42 742 742 HOH HOH . P 6 HOH B 43 743 743 HOH HOH . P 6 HOH B 44 744 744 HOH HOH . P 6 HOH B 45 745 745 HOH HOH . P 6 HOH B 46 746 746 HOH HOH . P 6 HOH B 47 747 747 HOH HOH . P 6 HOH B 48 748 748 HOH HOH . P 6 HOH B 49 749 749 HOH HOH . P 6 HOH B 50 750 750 HOH HOH . Q 6 HOH A 1 301 301 HOH HOH . Q 6 HOH A 2 302 302 HOH HOH . Q 6 HOH A 3 303 303 HOH HOH . Q 6 HOH A 4 304 304 HOH HOH . Q 6 HOH A 5 305 305 HOH HOH . Q 6 HOH A 6 306 306 HOH HOH . Q 6 HOH A 7 307 307 HOH HOH . Q 6 HOH A 8 308 308 HOH HOH . Q 6 HOH A 9 309 309 HOH HOH . Q 6 HOH A 10 310 310 HOH HOH . Q 6 HOH A 11 311 311 HOH HOH . Q 6 HOH A 12 312 312 HOH HOH . Q 6 HOH A 13 313 313 HOH HOH . Q 6 HOH A 14 314 314 HOH HOH . Q 6 HOH A 15 315 315 HOH HOH . Q 6 HOH A 16 316 316 HOH HOH . Q 6 HOH A 17 317 317 HOH HOH . Q 6 HOH A 18 318 318 HOH HOH . Q 6 HOH A 19 319 319 HOH HOH . Q 6 HOH A 20 320 320 HOH HOH . Q 6 HOH A 21 321 321 HOH HOH . Q 6 HOH A 22 322 322 HOH HOH . Q 6 HOH A 23 323 323 HOH HOH . Q 6 HOH A 24 324 324 HOH HOH . Q 6 HOH A 25 325 325 HOH HOH . Q 6 HOH A 26 326 326 HOH HOH . Q 6 HOH A 27 327 327 HOH HOH . Q 6 HOH A 28 328 328 HOH HOH . Q 6 HOH A 29 329 329 HOH HOH . Q 6 HOH A 30 330 330 HOH HOH . Q 6 HOH A 31 331 331 HOH HOH . Q 6 HOH A 32 332 332 HOH HOH . Q 6 HOH A 33 333 333 HOH HOH . Q 6 HOH A 34 334 334 HOH HOH . Q 6 HOH A 35 335 335 HOH HOH . Q 6 HOH A 36 336 336 HOH HOH . Q 6 HOH A 37 337 337 HOH HOH . Q 6 HOH A 38 338 338 HOH HOH . Q 6 HOH A 39 339 339 HOH HOH . Q 6 HOH A 40 340 340 HOH HOH . Q 6 HOH A 41 341 341 HOH HOH . Q 6 HOH A 42 342 342 HOH HOH . Q 6 HOH A 43 343 343 HOH HOH . Q 6 HOH A 44 344 344 HOH HOH . Q 6 HOH A 45 345 345 HOH HOH . Q 6 HOH A 46 346 346 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . M 2 20.386 7.516 7.58 1 52.94 ? C ACT 201 A 1 HETATM 2 O O ACT . . . M 2 20.666 6.517 6.914 1 66.1 ? O ACT 201 A 1 HETATM 3 O OXT ACT . . . M 2 21.226 8.333 7.96 1 54.73 ? OXT ACT 201 A 1 HETATM 4 C CH3 ACT . . . M 2 18.923 7.717 7.97 1 50.33 ? CH3 ACT 201 A 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 55 _model_server_stats.create_model_time_ms 44 _model_server_stats.query_time_ms 1153 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 4 #