data_7VIH # _model_server_result.job_id cuvWsrqNN_xOfF8TXaQE6w _model_server_result.datetime_utc '2025-01-02 16:01:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7vih # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":401}' # _entry.id 7VIH # _exptl.entry_id 7VIH _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 409.453 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '1-[[2-fluoranyl-4-[5-[4-(2-methylpropyl)phenyl]-1,2,4-oxadiazol-3-yl]phenyl]methyl]azetidine-3-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7VIH _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7VIH _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 C SG CYS 22 E CYS 22 1_555 C SG CYS 96 E CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 C SG CYS 159 E CYS 159 1_555 C SG CYS 229 E CYS 229 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 D SG CYS 184 F CYS 184 1_555 D SG CYS 191 F CYS 191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf4 D SG CYS 282 F CYS 282 1_555 D SG CYS 287 F CYS 287 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? # _chem_comp.formula 'C23 H24 F N3 O3' _chem_comp.formula_weight 409.453 _chem_comp.id 7I4 _chem_comp.mon_nstd_flag . _chem_comp.name '1-[[2-fluoranyl-4-[5-[4-(2-methylpropyl)phenyl]-1,2,4-oxadiazol-3-yl]phenyl]methyl]azetidine-3-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O22 C20 7I4 doub 1 n n C20 O21 7I4 sing 2 n n C20 C19 7I4 sing 3 n n C19 C18 7I4 sing 4 n n C19 C23 7I4 sing 5 n n C18 N17 7I4 sing 6 n n C23 N17 7I4 sing 7 n n C16 N17 7I4 sing 8 n n C16 C15 7I4 sing 9 n n C14 C15 7I4 doub 10 n y C14 C13 7I4 sing 11 n y C15 C24 7I4 sing 12 n y C13 C12 7I4 doub 13 n y C24 F25 7I4 sing 14 n n C24 C26 7I4 doub 15 n y C12 C26 7I4 sing 16 n y C12 C11 7I4 sing 17 n n N27 C11 7I4 doub 18 n y N27 O28 7I4 sing 19 n y C11 N10 7I4 sing 20 n y O28 C09 7I4 sing 21 n y N10 C09 7I4 doub 22 n y C09 C08 7I4 sing 23 n n C29 C08 7I4 doub 24 n y C29 C30 7I4 sing 25 n y C08 C07 7I4 sing 26 n y C30 C05 7I4 doub 27 n y C07 C06 7I4 doub 28 n y C05 C06 7I4 sing 29 n y C05 C04 7I4 sing 30 n n C04 C02 7I4 sing 31 n n C02 C03 7I4 sing 32 n n C02 C01 7I4 sing 33 n n C16 H1 7I4 sing 34 n n C16 H2 7I4 sing 35 n n C18 H3 7I4 sing 36 n n C18 H4 7I4 sing 37 n n C19 H5 7I4 sing 38 n n O21 H6 7I4 sing 39 n n C23 H7 7I4 sing 40 n n C23 H8 7I4 sing 41 n n C26 H9 7I4 sing 42 n n C01 H10 7I4 sing 43 n n C01 H11 7I4 sing 44 n n C01 H12 7I4 sing 45 n n C02 H13 7I4 sing 46 n n C03 H14 7I4 sing 47 n n C03 H15 7I4 sing 48 n n C03 H16 7I4 sing 49 n n C04 H17 7I4 sing 50 n n C04 H18 7I4 sing 51 n n C06 H19 7I4 sing 52 n n C07 H20 7I4 sing 53 n n C13 H21 7I4 sing 54 n n C14 H22 7I4 sing 55 n n C29 H24 7I4 sing 56 n n C30 H25 7I4 sing 57 n n # _atom_sites.entry_id 7VIH _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id F _pdbx_nonpoly_scheme.entity_id 6 _pdbx_nonpoly_scheme.mon_id 7I4 _pdbx_nonpoly_scheme.pdb_strand_id F _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 401 _pdbx_nonpoly_scheme.auth_seq_num 401 _pdbx_nonpoly_scheme.pdb_mon_id 7I4 _pdbx_nonpoly_scheme.auth_mon_id CBP _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 7I4 . . . F 6 125.552 113.565 81.442 1 104.08 ? C11 7I4 401 F 1 HETATM 2 C C15 7I4 . . . F 6 128.407 112.458 78.314 1 104.08 ? C15 7I4 401 F 1 HETATM 3 C C16 7I4 . . . F 6 129.361 112.146 77.145 1 104.08 ? C16 7I4 401 F 1 HETATM 4 C C18 7I4 . . . F 6 131.146 111.23 76.368 1 104.08 ? C18 7I4 401 F 1 HETATM 5 C C19 7I4 . . . F 6 130.621 110.395 75.358 1 104.08 ? C19 7I4 401 F 1 HETATM 6 C C20 7I4 . . . F 6 130.376 111.277 74.001 1 104.08 ? C20 7I4 401 F 1 HETATM 7 O O21 7I4 . . . F 6 131.25 112.003 73.471 1 104.08 ? O21 7I4 401 F 1 HETATM 8 C C23 7I4 . . . F 6 129.4 110.259 76.061 1 104.08 ? C23 7I4 401 F 1 HETATM 9 C C24 7I4 . . . F 6 128.753 112.279 79.611 1 104.08 ? C24 7I4 401 F 1 HETATM 10 C C26 7I4 . . . F 6 127.926 112.577 80.715 1 104.08 ? C26 7I4 401 F 1 HETATM 11 C C01 7I4 . . . F 6 119.129 116.945 88.338 1 104.08 ? C01 7I4 401 F 1 HETATM 12 C C02 7I4 . . . F 6 119.238 115.556 87.707 1 104.08 ? C02 7I4 401 F 1 HETATM 13 C C03 7I4 . . . F 6 117.831 114.99 87.933 1 104.08 ? C03 7I4 401 F 1 HETATM 14 C C04 7I4 . . . F 6 119.401 115.798 86.196 1 104.08 ? C04 7I4 401 F 1 HETATM 15 C C05 7I4 . . . F 6 120.699 115.341 85.479 1 104.08 ? C05 7I4 401 F 1 HETATM 16 C C06 7I4 . . . F 6 120.66 115.375 84.112 1 104.08 ? C06 7I4 401 F 1 HETATM 17 C C07 7I4 . . . F 6 121.765 114.991 83.358 1 104.08 ? C07 7I4 401 F 1 HETATM 18 C C08 7I4 . . . F 6 122.944 114.535 83.945 1 104.08 ? C08 7I4 401 F 1 HETATM 19 C C09 7I4 . . . F 6 124.034 114.171 82.907 1 104.08 ? C09 7I4 401 F 1 HETATM 20 N N10 7I4 . . . F 6 124.972 113.22 82.651 1 104.08 ? N10 7I4 401 F 1 HETATM 21 C C12 7I4 . . . F 6 126.651 113.096 80.448 1 104.08 ? C12 7I4 401 F 1 HETATM 22 C C13 7I4 . . . F 6 126.333 113.308 79.114 1 104.08 ? C13 7I4 401 F 1 HETATM 23 C C14 7I4 . . . F 6 127.178 112.998 78.071 1 104.08 ? C14 7I4 401 F 1 HETATM 24 N N17 7I4 . . . F 6 129.901 111.13 77.063 1 104.08 ? N17 7I4 401 F 1 HETATM 25 O O22 7I4 . . . F 6 129.272 111.272 73.421 1 104.08 ? O22 7I4 401 F 1 HETATM 26 F F25 7I4 . . . F 6 129.957 111.776 79.747 1 104.08 ? F25 7I4 401 F 1 HETATM 27 N N27 7I4 . . . F 6 124.945 114.642 81.038 1 104.08 ? N27 7I4 401 F 1 HETATM 28 O O28 7I4 . . . F 6 124.043 114.973 81.905 1 104.08 ? O28 7I4 401 F 1 HETATM 29 C C29 7I4 . . . F 6 122.982 114.528 85.329 1 104.08 ? C29 7I4 401 F 1 HETATM 30 C C30 7I4 . . . F 6 121.864 114.917 86.056 1 104.08 ? C30 7I4 401 F 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 46 _model_server_stats.query_time_ms 368 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 30 #