data_7VIS # _model_server_result.job_id Mmk0sHZts-SeY_Gxk-jKUg _model_server_result.datetime_utc '2024-12-27 20:27:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7vis # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 7VIS # _exptl.entry_id 7VIS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 196.967 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'GOLD ION' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7VIS _cell.length_a 182.594 _cell.length_b 182.594 _cell.length_c 182.594 _cell.Z_PDB 96 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7VIS _symmetry.cell_setting ? _symmetry.Int_Tables_number 209 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'F 4 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details 24-meric _pdbx_struct_assembly.oligomeric_count 24 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 0 182.594 0 3 'crystal symmetry operation' 3_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 4 'crystal symmetry operation' 4_565 x,-y+1,-z 1 0 0 0 -1 0 0 0 -1 0 182.594 0 5 'crystal symmetry operation' 21_555 z,y,-x 0 0 1 0 1 0 -1 0 0 0 0 0 6 'crystal symmetry operation' 22_565 z,-y+1,x 0 0 1 0 -1 0 1 0 0 0 182.594 0 7 'crystal symmetry operation' 23_555 -z,y,x 0 0 -1 0 1 0 1 0 0 0 0 0 8 'crystal symmetry operation' 24_565 -z,-y+1,-x 0 0 -1 0 -1 0 -1 0 0 0 182.594 0 9 'crystal symmetry operation' 29_554 z,x+1/2,y-1/2 0 0 1 1 0 0 0 1 0 0 91.297 -91.297 10 'crystal symmetry operation' 30_555 z,-x+1/2,-y+1/2 0 0 1 -1 0 0 0 -1 0 0 91.297 91.297 11 'crystal symmetry operation' 31_554 -z,-x+1/2,y-1/2 0 0 -1 -1 0 0 0 1 0 0 91.297 -91.297 12 'crystal symmetry operation' 32_555 -z,x+1/2,-y+1/2 0 0 -1 1 0 0 0 -1 0 0 91.297 91.297 13 'crystal symmetry operation' 41_555 x,z+1/2,-y+1/2 1 0 0 0 0 1 0 -1 0 0 91.297 91.297 14 'crystal symmetry operation' 42_554 -x,z+1/2,y-1/2 -1 0 0 0 0 1 0 1 0 0 91.297 -91.297 15 'crystal symmetry operation' 43_555 -x,-z+1/2,-y+1/2 -1 0 0 0 0 -1 0 -1 0 0 91.297 91.297 16 'crystal symmetry operation' 44_554 x,-z+1/2,y-1/2 1 0 0 0 0 -1 0 1 0 0 91.297 -91.297 17 'crystal symmetry operation' 81_455 y-1/2,z+1/2,x 0 1 0 0 0 1 1 0 0 -91.297 91.297 0 18 'crystal symmetry operation' 82_555 -y+1/2,z+1/2,-x 0 -1 0 0 0 1 -1 0 0 91.297 91.297 0 19 'crystal symmetry operation' 83_455 y-1/2,-z+1/2,-x 0 1 0 0 0 -1 -1 0 0 -91.297 91.297 0 20 'crystal symmetry operation' 84_555 -y+1/2,-z+1/2,x 0 -1 0 0 0 -1 1 0 0 91.297 91.297 0 21 'crystal symmetry operation' 85_455 y-1/2,x+1/2,-z 0 1 0 1 0 0 0 0 -1 -91.297 91.297 0 22 'crystal symmetry operation' 86_555 -y+1/2,-x+1/2,-z 0 -1 0 -1 0 0 0 0 -1 91.297 91.297 0 23 'crystal symmetry operation' 87_455 y-1/2,-x+1/2,z 0 1 0 -1 0 0 0 0 1 -91.297 91.297 0 24 'crystal symmetry operation' 88_555 -y+1/2,x+1/2,z 0 -1 0 1 0 0 0 0 1 91.297 91.297 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 48 A CYS 48 1_555 E AU AU . A AU 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc2 A SG CYS 48 A CYS 48 1_555 G AU AU . A AU 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? metalc ? metalc3 A ND1 HIS 49 A HIS 49 1_555 G AU AU . A AU 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.981 ? metalc ? metalc4 A OD1 ASP 80 A ASP 80 1_555 J CD CD . A CD 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.479 ? metalc ? metalc5 A OD1 ASP 80 A ASP 80 1_555 J CD CD . A CD 209 13_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.479 ? metalc ? metalc6 A OE1 GLN 82 A GLN 82 1_555 J CD CD . A CD 209 74_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc7 A ND1 HIS 114 A HIS 114 1_555 H AU AU . A AU 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? metalc ? metalc8 A SG CYS 126 A CYS 126 1_555 H AU AU . A AU 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? metalc ? metalc9 A SG CYS 126 A CYS 126 1_555 I AU AU . A AU 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? metalc ? metalc10 A OE1 GLU 130 A GLU 130 1_555 L CD CD . A CD 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc11 A OE2 GLU 130 A GLU 130 1_555 L CD CD . A CD 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? metalc ? metalc12 A OE1 GLU 130 A GLU 130 1_555 L CD CD . A CD 211 30_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc13 A OE2 GLU 130 A GLU 130 1_555 L CD CD . A CD 211 30_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? metalc ? metalc14 A ND1 HIS 168 A HIS 168 1_555 C AU AU . A AU 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? metalc ? metalc15 A SG CYS 169 A CYS 169 1_555 C AU AU . A AU 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? metalc ? metalc16 A SG CYS 169 A CYS 169 1_555 D AU AU . A AU 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.636 ? metalc ? metalc17 A SG CYS 169 A CYS 169 1_555 F AU AU . A AU 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc18 K CD CD . A CD 210 1_555 P O HOH . A HOH 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc19 K CD CD . A CD 210 1_555 P O HOH . A HOH 315 30_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc20 K CD CD . A CD 210 1_555 P O HOH . A HOH 428 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc21 K CD CD . A CD 210 1_555 P O HOH . A HOH 428 30_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? # _chem_comp.formula 'Au 1' _chem_comp.formula_weight 196.967 _chem_comp.id AU _chem_comp.mon_nstd_flag . _chem_comp.name 'GOLD ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7VIS _atom_sites.fract_transf_matrix[1][1] 0.005477 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005477 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005477 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 201 201 EDO EDO . C 3 AU A 1 202 1 AU AU . D 3 AU A 1 203 2 AU AU . E 3 AU A 1 204 3 AU AU . F 3 AU A 1 205 4 AU AU . G 3 AU A 1 206 5 AU AU . H 3 AU A 1 207 6 AU AU . I 3 AU A 1 208 7 AU AU . J 4 CD A 1 209 1 CD CD . K 4 CD A 1 210 2 CD CD . L 4 CD A 1 211 3 CD CD . M 5 SO4 A 1 212 1 SO4 SO4 . N 6 CL A 1 213 1 CL CL . O 6 CL A 1 214 2 CL CL . P 7 HOH A 1 301 338 HOH HOH . P 7 HOH A 2 302 337 HOH HOH . P 7 HOH A 3 303 13 HOH HOH . P 7 HOH A 4 304 254 HOH HOH . P 7 HOH A 5 305 296 HOH HOH . P 7 HOH A 6 306 238 HOH HOH . P 7 HOH A 7 307 163 HOH HOH . P 7 HOH A 8 308 100 HOH HOH . P 7 HOH A 9 309 243 HOH HOH . P 7 HOH A 10 310 91 HOH HOH . P 7 HOH A 11 311 188 HOH HOH . P 7 HOH A 12 312 158 HOH HOH . P 7 HOH A 13 313 101 HOH HOH . P 7 HOH A 14 314 190 HOH HOH . P 7 HOH A 15 315 334 HOH HOH . P 7 HOH A 16 316 271 HOH HOH . P 7 HOH A 17 317 248 HOH HOH . P 7 HOH A 18 318 266 HOH HOH . P 7 HOH A 19 319 53 HOH HOH . P 7 HOH A 20 320 263 HOH HOH . P 7 HOH A 21 321 226 HOH HOH . P 7 HOH A 22 322 331 HOH HOH . P 7 HOH A 23 323 279 HOH HOH . P 7 HOH A 24 324 19 HOH HOH . P 7 HOH A 25 325 105 HOH HOH . P 7 HOH A 26 326 31 HOH HOH . P 7 HOH A 27 327 44 HOH HOH . P 7 HOH A 28 328 15 HOH HOH . P 7 HOH A 29 329 29 HOH HOH . P 7 HOH A 30 330 303 HOH HOH . P 7 HOH A 31 331 24 HOH HOH . P 7 HOH A 32 332 69 HOH HOH . P 7 HOH A 33 333 97 HOH HOH . P 7 HOH A 34 334 255 HOH HOH . P 7 HOH A 35 335 5 HOH HOH . P 7 HOH A 36 336 127 HOH HOH . P 7 HOH A 37 337 332 HOH HOH . P 7 HOH A 38 338 58 HOH HOH . P 7 HOH A 39 339 240 HOH HOH . P 7 HOH A 40 340 261 HOH HOH . P 7 HOH A 41 341 47 HOH HOH . P 7 HOH A 42 342 16 HOH HOH . P 7 HOH A 43 343 73 HOH HOH . P 7 HOH A 44 344 269 HOH HOH . P 7 HOH A 45 345 23 HOH HOH . P 7 HOH A 46 346 22 HOH HOH . P 7 HOH A 47 347 51 HOH HOH . P 7 HOH A 48 348 61 HOH HOH . P 7 HOH A 49 349 35 HOH HOH . P 7 HOH A 50 350 17 HOH HOH . P 7 HOH A 51 351 63 HOH HOH . P 7 HOH A 52 352 302 HOH HOH . P 7 HOH A 53 353 12 HOH HOH . P 7 HOH A 54 354 33 HOH HOH . P 7 HOH A 55 355 71 HOH HOH . P 7 HOH A 56 356 37 HOH HOH . P 7 HOH A 57 357 88 HOH HOH . P 7 HOH A 58 358 328 HOH HOH . P 7 HOH A 59 359 40 HOH HOH . P 7 HOH A 60 360 41 HOH HOH . P 7 HOH A 61 361 7 HOH HOH . P 7 HOH A 62 362 225 HOH HOH . P 7 HOH A 63 363 10 HOH HOH . P 7 HOH A 64 364 94 HOH HOH . P 7 HOH A 65 365 50 HOH HOH . P 7 HOH A 66 366 6 HOH HOH . P 7 HOH A 67 367 252 HOH HOH . P 7 HOH A 68 368 116 HOH HOH . P 7 HOH A 69 369 18 HOH HOH . P 7 HOH A 70 370 330 HOH HOH . P 7 HOH A 71 371 38 HOH HOH . P 7 HOH A 72 372 30 HOH HOH . P 7 HOH A 73 373 8 HOH HOH . P 7 HOH A 74 374 264 HOH HOH . P 7 HOH A 75 375 80 HOH HOH . P 7 HOH A 76 376 112 HOH HOH . P 7 HOH A 77 377 57 HOH HOH . P 7 HOH A 78 378 79 HOH HOH . P 7 HOH A 79 379 74 HOH HOH . P 7 HOH A 80 380 34 HOH HOH . P 7 HOH A 81 381 257 HOH HOH . P 7 HOH A 82 382 276 HOH HOH . P 7 HOH A 83 383 121 HOH HOH . P 7 HOH A 84 384 118 HOH HOH . P 7 HOH A 85 385 26 HOH HOH . P 7 HOH A 86 386 192 HOH HOH . P 7 HOH A 87 387 49 HOH HOH . P 7 HOH A 88 388 284 HOH HOH . P 7 HOH A 89 389 48 HOH HOH . P 7 HOH A 90 390 134 HOH HOH . P 7 HOH A 91 391 67 HOH HOH . P 7 HOH A 92 392 28 HOH HOH . P 7 HOH A 93 393 43 HOH HOH . P 7 HOH A 94 394 32 HOH HOH . P 7 HOH A 95 395 87 HOH HOH . P 7 HOH A 96 396 273 HOH HOH . P 7 HOH A 97 397 68 HOH HOH . P 7 HOH A 98 398 268 HOH HOH . P 7 HOH A 99 399 137 HOH HOH . P 7 HOH A 100 400 260 HOH HOH . P 7 HOH A 101 401 124 HOH HOH . P 7 HOH A 102 402 251 HOH HOH . P 7 HOH A 103 403 106 HOH HOH . P 7 HOH A 104 404 76 HOH HOH . P 7 HOH A 105 405 227 HOH HOH . P 7 HOH A 106 406 239 HOH HOH . P 7 HOH A 107 407 108 HOH HOH . P 7 HOH A 108 408 176 HOH HOH . P 7 HOH A 109 409 14 HOH HOH . P 7 HOH A 110 410 234 HOH HOH . P 7 HOH A 111 411 223 HOH HOH . P 7 HOH A 112 412 231 HOH HOH . P 7 HOH A 113 413 179 HOH HOH . P 7 HOH A 114 414 154 HOH HOH . P 7 HOH A 115 415 54 HOH HOH . P 7 HOH A 116 416 56 HOH HOH . P 7 HOH A 117 417 272 HOH HOH . P 7 HOH A 118 418 256 HOH HOH . P 7 HOH A 119 419 59 HOH HOH . P 7 HOH A 120 420 25 HOH HOH . P 7 HOH A 121 421 65 HOH HOH . P 7 HOH A 122 422 162 HOH HOH . P 7 HOH A 123 423 262 HOH HOH . P 7 HOH A 124 424 62 HOH HOH . P 7 HOH A 125 425 336 HOH HOH . P 7 HOH A 126 426 258 HOH HOH . P 7 HOH A 127 427 66 HOH HOH . P 7 HOH A 128 428 244 HOH HOH . P 7 HOH A 129 429 301 HOH HOH . P 7 HOH A 130 430 333 HOH HOH . P 7 HOH A 131 431 202 HOH HOH . P 7 HOH A 132 432 119 HOH HOH . P 7 HOH A 133 433 236 HOH HOH . P 7 HOH A 134 434 198 HOH HOH . P 7 HOH A 135 435 21 HOH HOH . P 7 HOH A 136 436 208 HOH HOH . P 7 HOH A 137 437 45 HOH HOH . P 7 HOH A 138 438 241 HOH HOH . P 7 HOH A 139 439 111 HOH HOH . P 7 HOH A 140 440 335 HOH HOH . P 7 HOH A 141 441 52 HOH HOH . P 7 HOH A 142 442 230 HOH HOH . P 7 HOH A 143 443 83 HOH HOH . P 7 HOH A 144 444 36 HOH HOH . P 7 HOH A 145 445 102 HOH HOH . P 7 HOH A 146 446 157 HOH HOH . P 7 HOH A 147 447 228 HOH HOH . P 7 HOH A 148 448 205 HOH HOH . P 7 HOH A 149 449 194 HOH HOH . P 7 HOH A 150 450 110 HOH HOH . P 7 HOH A 151 451 89 HOH HOH . P 7 HOH A 152 452 294 HOH HOH . P 7 HOH A 153 453 219 HOH HOH . P 7 HOH A 154 454 298 HOH HOH . P 7 HOH A 155 455 114 HOH HOH . P 7 HOH A 156 456 125 HOH HOH . P 7 HOH A 157 457 203 HOH HOH . P 7 HOH A 158 458 42 HOH HOH . P 7 HOH A 159 459 339 HOH HOH . P 7 HOH A 160 460 82 HOH HOH . P 7 HOH A 161 461 161 HOH HOH . P 7 HOH A 162 462 93 HOH HOH . P 7 HOH A 163 463 81 HOH HOH . P 7 HOH A 164 464 246 HOH HOH . P 7 HOH A 165 465 237 HOH HOH . P 7 HOH A 166 466 235 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol AU _atom_site.label_atom_id AU _atom_site.label_comp_id AU _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 1.128 _atom_site.Cartn_y 48.612 _atom_site.Cartn_z 4.113 _atom_site.occupancy 0.65 _atom_site.B_iso_or_equiv 31.11 _atom_site.pdbx_formal_charge 0 _atom_site.auth_atom_id AU _atom_site.auth_comp_id AU _atom_site.auth_seq_id 202 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #