data_7VJ4
#
_model_server_result.job_id            ZFpxuEgHeWkw1Cy6mQepiQ 
_model_server_result.datetime_utc      '2024-12-28 02:19:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7vj4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":503}' 
#
_entry.id    7VJ4 
#
_exptl.entry_id    7VJ4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7VJ4 
_cell.length_a            70.82 
_cell.length_b            70.82 
_cell.length_c            247.08 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7VJ4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 83 n n 
PA O2A FAD sing 84 n n 
PA O5B FAD sing 85 n n 
PA O3P FAD sing 86 n n 
O2A HOA2 FAD sing 87 n n 
O5B C5B FAD sing 88 n n 
C5B C4B FAD sing 89 n n 
C5B H51A FAD sing 90 n n 
C5B H52A FAD sing 91 n n 
C4B O4B FAD sing 92 n n 
C4B C3B FAD sing 93 n n 
C4B H4B FAD sing 94 n n 
O4B C1B FAD sing 95 n n 
C3B O3B FAD sing 96 n n 
C3B C2B FAD sing 97 n n 
C3B H3B FAD sing 98 n n 
O3B HO3A FAD sing 99 n n 
C2B O2B FAD sing 100 n n 
C2B C1B FAD sing 101 n n 
C2B H2B FAD sing 102 n n 
O2B HO2A FAD sing 103 n n 
C1B N9A FAD sing 104 n n 
C1B H1B FAD sing 105 n n 
N9A C8A FAD sing 106 n y 
N9A C4A FAD sing 107 n y 
C8A N7A FAD doub 108 n y 
C8A H8A FAD sing 109 n n 
N7A C5A FAD sing 110 n y 
C5A C6A FAD sing 111 n y 
C5A C4A FAD doub 112 n y 
C6A N6A FAD sing 113 n n 
C6A N1A FAD doub 114 n y 
N6A H61A FAD sing 115 n n 
N6A H62A FAD sing 116 n n 
N1A C2A FAD sing 117 n y 
C2A N3A FAD doub 118 n y 
C2A H2A FAD sing 119 n n 
N3A C4A FAD sing 120 n y 
N1 C2 FAD sing 121 n n 
N1 C10 FAD doub 122 n n 
C2 O2 FAD doub 123 n n 
C2 N3 FAD sing 124 n n 
N3 C4 FAD sing 125 n n 
N3 HN3 FAD sing 126 n n 
C4 O4 FAD doub 127 n n 
C4 C4X FAD sing 128 n n 
C4X N5 FAD doub 129 n n 
C4X C10 FAD sing 130 n n 
N5 C5X FAD sing 131 n n 
C5X C6 FAD doub 132 n y 
C5X C9A FAD sing 133 n y 
C6 C7 FAD sing 134 n y 
C6 H6 FAD sing 135 n n 
C7 C7M FAD sing 136 n n 
C7 C8 FAD doub 137 n y 
C7M HM71 FAD sing 138 n n 
C7M HM72 FAD sing 139 n n 
C7M HM73 FAD sing 140 n n 
C8 C8M FAD sing 141 n n 
C8 C9 FAD sing 142 n y 
C8M HM81 FAD sing 143 n n 
C8M HM82 FAD sing 144 n n 
C8M HM83 FAD sing 145 n n 
C9 C9A FAD doub 146 n y 
C9 H9 FAD sing 147 n n 
C9A N10 FAD sing 148 n n 
N10 C10 FAD sing 149 n n 
N10 C1' FAD sing 150 n n 
C1' C2' FAD sing 151 n n 
C1' "H1'1" FAD sing 152 n n 
C1' "H1'2" FAD sing 153 n n 
C2' O2' FAD sing 154 n n 
C2' C3' FAD sing 155 n n 
C2' H2' FAD sing 156 n n 
O2' HO2' FAD sing 157 n n 
C3' O3' FAD sing 158 n n 
C3' C4' FAD sing 159 n n 
C3' H3' FAD sing 160 n n 
O3' HO3' FAD sing 161 n n 
C4' O4' FAD sing 162 n n 
C4' C5' FAD sing 163 n n 
C4' H4' FAD sing 164 n n 
O4' HO4' FAD sing 165 n n 
C5' O5' FAD sing 166 n n 
C5' "H5'1" FAD sing 167 n n 
C5' "H5'2" FAD sing 168 n n 
O5' P FAD sing 169 n n 
P O1P FAD doub 170 n n 
P O2P FAD sing 171 n n 
P O3P FAD sing 172 n n 
O2P HOP2 FAD sing 173 n n 
#
_atom_sites.entry_id                     7VJ4 
_atom_sites.fract_transf_matrix[1][1]    0.01412 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01412 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004047 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 501 501 SO4 SO4 . 
C 2 SO4 A 1 502 502 SO4 SO4 . 
D 3 FAD A 1 503 503 FAD FAD . 
E 4 HOH A 1 601 601 HOH HOH . 
E 4 HOH A 2 602 602 HOH HOH . 
E 4 HOH A 3 603 603 HOH HOH . 
E 4 HOH A 4 604 604 HOH HOH . 
E 4 HOH A 5 605 605 HOH HOH . 
E 4 HOH A 6 606 606 HOH HOH . 
E 4 HOH A 7 607 607 HOH HOH . 
E 4 HOH A 8 608 608 HOH HOH . 
E 4 HOH A 9 609 609 HOH HOH . 
E 4 HOH A 10 610 610 HOH HOH . 
E 4 HOH A 11 611 611 HOH HOH . 
E 4 HOH A 12 612 612 HOH HOH . 
E 4 HOH A 13 613 613 HOH HOH . 
E 4 HOH A 14 614 614 HOH HOH . 
E 4 HOH A 15 615 615 HOH HOH . 
E 4 HOH A 16 616 616 HOH HOH . 
E 4 HOH A 17 617 617 HOH HOH . 
E 4 HOH A 18 618 618 HOH HOH . 
E 4 HOH A 19 619 619 HOH HOH . 
E 4 HOH A 20 620 620 HOH HOH . 
E 4 HOH A 21 621 621 HOH HOH . 
E 4 HOH A 22 622 622 HOH HOH . 
E 4 HOH A 23 623 623 HOH HOH . 
E 4 HOH A 24 624 624 HOH HOH . 
E 4 HOH A 25 625 625 HOH HOH . 
E 4 HOH A 26 626 626 HOH HOH . 
E 4 HOH A 27 627 627 HOH HOH . 
E 4 HOH A 28 628 628 HOH HOH . 
E 4 HOH A 29 629 629 HOH HOH . 
E 4 HOH A 30 630 630 HOH HOH . 
E 4 HOH A 31 631 631 HOH HOH . 
E 4 HOH A 32 632 632 HOH HOH . 
E 4 HOH A 33 633 633 HOH HOH . 
E 4 HOH A 34 634 634 HOH HOH . 
E 4 HOH A 35 635 635 HOH HOH . 
E 4 HOH A 36 636 636 HOH HOH . 
E 4 HOH A 37 637 637 HOH HOH . 
E 4 HOH A 38 638 638 HOH HOH . 
E 4 HOH A 39 639 639 HOH HOH . 
E 4 HOH A 40 640 640 HOH HOH . 
E 4 HOH A 41 641 641 HOH HOH . 
E 4 HOH A 42 642 642 HOH HOH . 
E 4 HOH A 43 643 643 HOH HOH . 
E 4 HOH A 44 644 644 HOH HOH . 
E 4 HOH A 45 645 645 HOH HOH . 
E 4 HOH A 46 646 646 HOH HOH . 
E 4 HOH A 47 647 647 HOH HOH . 
E 4 HOH A 48 648 648 HOH HOH . 
E 4 HOH A 49 649 649 HOH HOH . 
E 4 HOH A 50 650 650 HOH HOH . 
E 4 HOH A 51 651 651 HOH HOH . 
E 4 HOH A 52 652 652 HOH HOH . 
E 4 HOH A 53 653 653 HOH HOH . 
E 4 HOH A 54 654 654 HOH HOH . 
E 4 HOH A 55 655 655 HOH HOH . 
E 4 HOH A 56 656 656 HOH HOH . 
E 4 HOH A 57 657 657 HOH HOH . 
E 4 HOH A 58 658 658 HOH HOH . 
E 4 HOH A 59 659 659 HOH HOH . 
E 4 HOH A 60 660 660 HOH HOH . 
E 4 HOH A 61 661 661 HOH HOH . 
E 4 HOH A 62 662 662 HOH HOH . 
E 4 HOH A 63 663 663 HOH HOH . 
E 4 HOH A 64 664 664 HOH HOH . 
E 4 HOH A 65 665 665 HOH HOH . 
E 4 HOH A 66 666 666 HOH HOH . 
E 4 HOH A 67 667 667 HOH HOH . 
E 4 HOH A 68 668 668 HOH HOH . 
E 4 HOH A 69 669 669 HOH HOH . 
E 4 HOH A 70 670 670 HOH HOH . 
E 4 HOH A 71 671 671 HOH HOH . 
E 4 HOH A 72 672 672 HOH HOH . 
E 4 HOH A 73 673 673 HOH HOH . 
E 4 HOH A 74 674 674 HOH HOH . 
E 4 HOH A 75 675 675 HOH HOH . 
E 4 HOH A 76 676 676 HOH HOH . 
E 4 HOH A 77 677 677 HOH HOH . 
E 4 HOH A 78 678 678 HOH HOH . 
E 4 HOH A 79 679 679 HOH HOH . 
E 4 HOH A 80 680 680 HOH HOH . 
E 4 HOH A 81 681 681 HOH HOH . 
E 4 HOH A 82 682 682 HOH HOH . 
E 4 HOH A 83 683 683 HOH HOH . 
E 4 HOH A 84 684 684 HOH HOH . 
E 4 HOH A 85 685 685 HOH HOH . 
E 4 HOH A 86 686 686 HOH HOH . 
E 4 HOH A 87 687 687 HOH HOH . 
E 4 HOH A 88 688 688 HOH HOH . 
E 4 HOH A 89 689 689 HOH HOH . 
E 4 HOH A 90 690 690 HOH HOH . 
E 4 HOH A 91 691 691 HOH HOH . 
E 4 HOH A 92 692 692 HOH HOH . 
E 4 HOH A 93 693 693 HOH HOH . 
E 4 HOH A 94 694 694 HOH HOH . 
E 4 HOH A 95 695 695 HOH HOH . 
E 4 HOH A 96 696 696 HOH HOH . 
E 4 HOH A 97 697 697 HOH HOH . 
E 4 HOH A 98 698 698 HOH HOH . 
E 4 HOH A 99 699 699 HOH HOH . 
E 4 HOH A 100 700 700 HOH HOH . 
E 4 HOH A 101 701 701 HOH HOH . 
E 4 HOH A 102 702 702 HOH HOH . 
E 4 HOH A 103 703 703 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . D 3 25.141 22.781 95.977 1 46.93 ? PA FAD 503 A 1 
HETATM 2 O O1A FAD . . . D 3 24.561 22.359 94.701 1 51.35 ? O1A FAD 503 A 1 
HETATM 3 O O2A FAD . . . D 3 26.709 22.225 96.111 1 51.83 ? O2A FAD 503 A 1 
HETATM 4 O O5B FAD . . . D 3 24.225 22.161 97.257 1 44.41 ? O5B FAD 503 A 1 
HETATM 5 C C5B FAD . . . D 3 22.926 21.605 96.95 1 49.06 ? C5B FAD 503 A 1 
HETATM 6 C C4B FAD . . . D 3 22.347 21.092 98.141 1 48.68 ? C4B FAD 503 A 1 
HETATM 7 O O4B FAD . . . D 3 23.095 19.989 98.573 1 47.27 ? O4B FAD 503 A 1 
HETATM 8 C C3B FAD . . . D 3 22.393 22.024 99.117 1 44.16 ? C3B FAD 503 A 1 
HETATM 9 O O3B FAD . . . D 3 21.169 22.718 99.181 1 44.43 ? O3B FAD 503 A 1 
HETATM 10 C C2B FAD . . . D 3 22.613 21.356 100.298 1 46.01 ? C2B FAD 503 A 1 
HETATM 11 O O2B FAD . . . D 3 21.365 21.112 100.928 1 46.01 ? O2B FAD 503 A 1 
HETATM 12 C C1B FAD . . . D 3 23.201 20.18 99.989 1 48.47 ? C1B FAD 503 A 1 
HETATM 13 N N9A FAD . . . D 3 24.521 20.157 100.374 1 47.49 ? N9A FAD 503 A 1 
HETATM 14 C C8A FAD . . . D 3 25.461 20.559 99.621 1 46.29 ? C8A FAD 503 A 1 
HETATM 15 N N7A FAD . . . D 3 26.613 20.397 100.281 1 47.09 ? N7A FAD 503 A 1 
HETATM 16 C C5A FAD . . . D 3 26.308 19.85 101.517 1 46.21 ? C5A FAD 503 A 1 
HETATM 17 C C6A FAD . . . D 3 27.011 19.449 102.653 1 43.52 ? C6A FAD 503 A 1 
HETATM 18 N N6A FAD . . . D 3 28.457 19.571 102.701 1 43 ? N6A FAD 503 A 1 
HETATM 19 N N1A FAD . . . D 3 26.355 18.955 103.689 1 43.99 ? N1A FAD 503 A 1 
HETATM 20 C C2A FAD . . . D 3 25.035 18.837 103.663 1 46.03 ? C2A FAD 503 A 1 
HETATM 21 N N3A FAD . . . D 3 24.303 19.202 102.609 1 46.98 ? N3A FAD 503 A 1 
HETATM 22 C C4A FAD . . . D 3 24.888 19.71 101.526 1 46.87 ? C4A FAD 503 A 1 
HETATM 23 N N1 FAD . . . D 3 24.471 24.482 104.206 1 43.75 ? N1 FAD 503 A 1 
HETATM 24 C C2 FAD . . . D 3 23.368 25.182 104.58 1 42.46 ? C2 FAD 503 A 1 
HETATM 25 O O2 FAD . . . D 3 22.265 25.148 103.804 1 42.26 ? O2 FAD 503 A 1 
HETATM 26 N N3 FAD . . . D 3 23.367 25.902 105.704 1 43.89 ? N3 FAD 503 A 1 
HETATM 27 C C4 FAD . . . D 3 24.44 25.956 106.455 1 43.7 ? C4 FAD 503 A 1 
HETATM 28 O O4 FAD . . . D 3 24.414 26.674 107.593 1 43.9 ? O4 FAD 503 A 1 
HETATM 29 C C4X FAD . . . D 3 25.572 25.249 106.115 1 44.17 ? C4X FAD 503 A 1 
HETATM 30 N N5 FAD . . . D 3 26.603 25.321 106.936 1 44.76 ? N5 FAD 503 A 1 
HETATM 31 C C5X FAD . . . D 3 27.705 24.676 106.485 1 44.3 ? C5X FAD 503 A 1 
HETATM 32 C C6 FAD . . . D 3 28.859 24.779 107.246 1 44.1 ? C6 FAD 503 A 1 
HETATM 33 C C7 FAD . . . D 3 30.027 24.139 106.838 1 43.28 ? C7 FAD 503 A 1 
HETATM 34 C C7M FAD . . . D 3 31.312 24.248 107.681 1 45.9 ? C7M FAD 503 A 1 
HETATM 35 C C8 FAD . . . D 3 30.036 23.392 105.648 1 44.85 ? C8 FAD 503 A 1 
HETATM 36 C C8M FAD . . . D 3 31.339 22.686 105.197 1 47.94 ? C8M FAD 503 A 1 
HETATM 37 C C9 FAD . . . D 3 28.893 23.295 104.878 1 44.07 ? C9 FAD 503 A 1 
HETATM 38 C C9A FAD . . . D 3 27.686 23.907 105.294 1 43.84 ? C9A FAD 503 A 1 
HETATM 39 N N10 FAD . . . D 3 26.631 23.844 104.557 1 44.33 ? N10 FAD 503 A 1 
HETATM 40 C C10 FAD . . . D 3 25.578 24.483 104.973 1 43.64 ? C10 FAD 503 A 1 
HETATM 41 C C1' FAD . . . D 3 26.439 22.681 103.644 1 43.24 ? C1' FAD 503 A 1 
HETATM 42 C C2' FAD . . . D 3 26.803 23.075 102.221 1 43.73 ? C2' FAD 503 A 1 
HETATM 43 O O2' FAD . . . D 3 27.888 23.737 102.212 1 45.08 ? O2' FAD 503 A 1 
HETATM 44 C C3' FAD . . . D 3 25.8 23.86 101.583 1 44.37 ? C3' FAD 503 A 1 
HETATM 45 O O3' FAD . . . D 3 24.647 23.186 101.55 1 43.72 ? O3' FAD 503 A 1 
HETATM 46 C C4' FAD . . . D 3 26.159 24.265 100.278 1 44.4 ? C4' FAD 503 A 1 
HETATM 47 O O4' FAD . . . D 3 27.348 24.749 100.258 1 46.67 ? O4' FAD 503 A 1 
HETATM 48 C C5' FAD . . . D 3 25.206 25.325 99.815 1 45.2 ? C5' FAD 503 A 1 
HETATM 49 O O5' FAD . . . D 3 25.52 25.691 98.439 1 47.42 ? O5' FAD 503 A 1 
HETATM 50 P P FAD . . . D 3 24.38 25.351 97.217 1 44.78 ? P FAD 503 A 1 
HETATM 51 O O1P FAD . . . D 3 23.228 24.642 97.768 1 43.31 ? O1P FAD 503 A 1 
HETATM 52 O O2P FAD . . . D 3 23.86 26.77 96.547 1 46.94 ? O2P FAD 503 A 1 
HETATM 53 O O3P FAD . . . D 3 25.138 24.459 96.03 1 49.66 ? O3P FAD 503 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           249 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           53 
#