data_7VJK
#
_model_server_result.job_id            Om7QcyIEs5-Be_j9Jvtdog 
_model_server_result.datetime_utc      '2024-11-08 13:37:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7vjk 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":505}' 
#
_entry.id    7VJK 
#
_exptl.entry_id    7VJK 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              154.251 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2,3-DIHYDROXY-1,4-DITHIOBUTANE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7VJK 
_cell.length_a            70.55 
_cell.length_b            70.55 
_cell.length_c            245.7 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7VJK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C4 H10 O2 S2' 
_chem_comp.formula_weight    154.251 
_chem_comp.id                DTT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2,3-DIHYDROXY-1,4-DITHIOBUTANE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     1,4-DITHIOTHREITOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S1 C1 DTT sing 83 n n 
S1 HS1 DTT sing 84 n n 
C1 C2 DTT sing 85 n n 
C1 H11 DTT sing 86 n n 
C1 H12 DTT sing 87 n n 
C2 O2 DTT sing 88 n n 
C2 C3 DTT sing 89 n n 
C2 H2 DTT sing 90 n n 
O2 HO2 DTT sing 91 n n 
C3 O3 DTT sing 92 n n 
C3 C4 DTT sing 93 n n 
C3 H3 DTT sing 94 n n 
O3 HO3 DTT sing 95 n n 
C4 S4 DTT sing 96 n n 
C4 H41 DTT sing 97 n n 
C4 H42 DTT sing 98 n n 
S4 HS2 DTT sing 99 n n 
#
_atom_sites.entry_id                     7VJK 
_atom_sites.fract_transf_matrix[1][1]    0.014174 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014174 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00407 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 501 501 SO4 SO4 . 
C 2 SO4 A 1 502 502 SO4 SO4 . 
D 3 FAD A 1 503 503 FAD FAD . 
E 2 SO4 A 1 504 504 SO4 SO4 . 
F 4 DTT A 1 505 505 DTT DTT . 
G 5 HOH A 1 601 601 HOH HOH . 
G 5 HOH A 2 602 602 HOH HOH . 
G 5 HOH A 3 603 603 HOH HOH . 
G 5 HOH A 4 604 604 HOH HOH . 
G 5 HOH A 5 605 605 HOH HOH . 
G 5 HOH A 6 606 606 HOH HOH . 
G 5 HOH A 7 607 607 HOH HOH . 
G 5 HOH A 8 608 608 HOH HOH . 
G 5 HOH A 9 609 609 HOH HOH . 
G 5 HOH A 10 610 610 HOH HOH . 
G 5 HOH A 11 611 611 HOH HOH . 
G 5 HOH A 12 612 612 HOH HOH . 
G 5 HOH A 13 613 613 HOH HOH . 
G 5 HOH A 14 614 614 HOH HOH . 
G 5 HOH A 15 615 615 HOH HOH . 
G 5 HOH A 16 616 616 HOH HOH . 
G 5 HOH A 17 617 617 HOH HOH . 
G 5 HOH A 18 618 618 HOH HOH . 
G 5 HOH A 19 619 619 HOH HOH . 
G 5 HOH A 20 620 620 HOH HOH . 
G 5 HOH A 21 621 621 HOH HOH . 
G 5 HOH A 22 622 622 HOH HOH . 
G 5 HOH A 23 623 623 HOH HOH . 
G 5 HOH A 24 624 624 HOH HOH . 
G 5 HOH A 25 625 625 HOH HOH . 
G 5 HOH A 26 626 626 HOH HOH . 
G 5 HOH A 27 627 627 HOH HOH . 
G 5 HOH A 28 628 628 HOH HOH . 
G 5 HOH A 29 629 629 HOH HOH . 
G 5 HOH A 30 630 630 HOH HOH . 
G 5 HOH A 31 631 631 HOH HOH . 
G 5 HOH A 32 632 632 HOH HOH . 
G 5 HOH A 33 633 633 HOH HOH . 
G 5 HOH A 34 634 634 HOH HOH . 
G 5 HOH A 35 635 635 HOH HOH . 
G 5 HOH A 36 636 636 HOH HOH . 
G 5 HOH A 37 637 637 HOH HOH . 
G 5 HOH A 38 638 638 HOH HOH . 
G 5 HOH A 39 639 639 HOH HOH . 
G 5 HOH A 40 640 640 HOH HOH . 
G 5 HOH A 41 641 641 HOH HOH . 
G 5 HOH A 42 642 642 HOH HOH . 
G 5 HOH A 43 643 643 HOH HOH . 
G 5 HOH A 44 644 644 HOH HOH . 
G 5 HOH A 45 645 645 HOH HOH . 
G 5 HOH A 46 646 646 HOH HOH . 
G 5 HOH A 47 647 647 HOH HOH . 
G 5 HOH A 48 648 648 HOH HOH . 
G 5 HOH A 49 649 649 HOH HOH . 
G 5 HOH A 50 650 650 HOH HOH . 
G 5 HOH A 51 651 651 HOH HOH . 
G 5 HOH A 52 652 652 HOH HOH . 
G 5 HOH A 53 653 653 HOH HOH . 
G 5 HOH A 54 654 654 HOH HOH . 
G 5 HOH A 55 655 655 HOH HOH . 
G 5 HOH A 56 656 656 HOH HOH . 
G 5 HOH A 57 657 657 HOH HOH . 
G 5 HOH A 58 658 658 HOH HOH . 
G 5 HOH A 59 659 659 HOH HOH . 
G 5 HOH A 60 660 660 HOH HOH . 
G 5 HOH A 61 661 661 HOH HOH . 
G 5 HOH A 62 662 662 HOH HOH . 
G 5 HOH A 63 663 663 HOH HOH . 
G 5 HOH A 64 664 664 HOH HOH . 
G 5 HOH A 65 665 665 HOH HOH . 
G 5 HOH A 66 666 666 HOH HOH . 
G 5 HOH A 67 667 667 HOH HOH . 
G 5 HOH A 68 668 668 HOH HOH . 
G 5 HOH A 69 669 669 HOH HOH . 
G 5 HOH A 70 670 670 HOH HOH . 
G 5 HOH A 71 671 671 HOH HOH . 
G 5 HOH A 72 672 672 HOH HOH . 
G 5 HOH A 73 673 673 HOH HOH . 
G 5 HOH A 74 674 674 HOH HOH . 
G 5 HOH A 75 675 675 HOH HOH . 
G 5 HOH A 76 676 676 HOH HOH . 
G 5 HOH A 77 677 677 HOH HOH . 
G 5 HOH A 78 678 678 HOH HOH . 
G 5 HOH A 79 679 679 HOH HOH . 
G 5 HOH A 80 680 680 HOH HOH . 
G 5 HOH A 81 681 681 HOH HOH . 
G 5 HOH A 82 682 682 HOH HOH . 
G 5 HOH A 83 683 683 HOH HOH . 
G 5 HOH A 84 684 684 HOH HOH . 
G 5 HOH A 85 685 685 HOH HOH . 
G 5 HOH A 86 686 686 HOH HOH . 
G 5 HOH A 87 687 687 HOH HOH . 
G 5 HOH A 88 688 688 HOH HOH . 
G 5 HOH A 89 689 689 HOH HOH . 
G 5 HOH A 90 690 690 HOH HOH . 
G 5 HOH A 91 691 691 HOH HOH . 
G 5 HOH A 92 692 692 HOH HOH . 
G 5 HOH A 93 693 693 HOH HOH . 
G 5 HOH A 94 694 694 HOH HOH . 
G 5 HOH A 95 695 695 HOH HOH . 
G 5 HOH A 96 696 696 HOH HOH . 
G 5 HOH A 97 697 697 HOH HOH . 
G 5 HOH A 98 698 698 HOH HOH . 
G 5 HOH A 99 699 699 HOH HOH . 
G 5 HOH A 100 700 700 HOH HOH . 
G 5 HOH A 101 701 701 HOH HOH . 
G 5 HOH A 102 702 702 HOH HOH . 
G 5 HOH A 103 703 703 HOH HOH . 
G 5 HOH A 104 704 704 HOH HOH . 
G 5 HOH A 105 705 705 HOH HOH . 
G 5 HOH A 106 706 706 HOH HOH . 
G 5 HOH A 107 707 707 HOH HOH . 
G 5 HOH A 108 708 708 HOH HOH . 
G 5 HOH A 109 709 709 HOH HOH . 
G 5 HOH A 110 710 710 HOH HOH . 
G 5 HOH A 111 711 711 HOH HOH . 
G 5 HOH A 112 712 712 HOH HOH . 
G 5 HOH A 113 713 713 HOH HOH . 
G 5 HOH A 114 714 714 HOH HOH . 
G 5 HOH A 115 715 715 HOH HOH . 
G 5 HOH A 116 716 716 HOH HOH . 
G 5 HOH A 117 717 717 HOH HOH . 
G 5 HOH A 118 718 718 HOH HOH . 
G 5 HOH A 119 719 719 HOH HOH . 
G 5 HOH A 120 720 720 HOH HOH . 
G 5 HOH A 121 721 721 HOH HOH . 
G 5 HOH A 122 722 722 HOH HOH . 
G 5 HOH A 123 723 723 HOH HOH . 
G 5 HOH A 124 724 724 HOH HOH . 
G 5 HOH A 125 725 725 HOH HOH . 
G 5 HOH A 126 726 726 HOH HOH . 
G 5 HOH A 127 727 727 HOH HOH . 
G 5 HOH A 128 728 728 HOH HOH . 
G 5 HOH A 129 729 729 HOH HOH . 
G 5 HOH A 130 730 730 HOH HOH . 
G 5 HOH A 131 731 731 HOH HOH . 
G 5 HOH A 132 732 732 HOH HOH . 
G 5 HOH A 133 733 733 HOH HOH . 
G 5 HOH A 134 734 734 HOH HOH . 
G 5 HOH A 135 735 735 HOH HOH . 
G 5 HOH A 136 736 736 HOH HOH . 
G 5 HOH A 137 737 737 HOH HOH . 
G 5 HOH A 138 738 738 HOH HOH . 
G 5 HOH A 139 739 739 HOH HOH . 
G 5 HOH A 140 740 740 HOH HOH . 
G 5 HOH A 141 741 741 HOH HOH . 
G 5 HOH A 142 742 742 HOH HOH . 
G 5 HOH A 143 743 743 HOH HOH . 
G 5 HOH A 144 744 744 HOH HOH . 
G 5 HOH A 145 745 745 HOH HOH . 
G 5 HOH A 146 746 746 HOH HOH . 
G 5 HOH A 147 747 747 HOH HOH . 
G 5 HOH A 148 748 748 HOH HOH . 
G 5 HOH A 149 749 749 HOH HOH . 
G 5 HOH A 150 750 750 HOH HOH . 
G 5 HOH A 151 751 751 HOH HOH . 
G 5 HOH A 152 752 752 HOH HOH . 
G 5 HOH A 153 753 753 HOH HOH . 
G 5 HOH A 154 754 754 HOH HOH . 
G 5 HOH A 155 755 755 HOH HOH . 
G 5 HOH A 156 756 756 HOH HOH . 
G 5 HOH A 157 757 757 HOH HOH . 
G 5 HOH A 158 758 758 HOH HOH . 
G 5 HOH A 159 759 759 HOH HOH . 
G 5 HOH A 160 760 760 HOH HOH . 
G 5 HOH A 161 761 761 HOH HOH . 
G 5 HOH A 162 762 762 HOH HOH . 
G 5 HOH A 163 763 763 HOH HOH . 
G 5 HOH A 164 764 764 HOH HOH . 
G 5 HOH A 165 765 765 HOH HOH . 
G 5 HOH A 166 766 766 HOH HOH . 
G 5 HOH A 167 767 767 HOH HOH . 
G 5 HOH A 168 768 768 HOH HOH . 
G 5 HOH A 169 769 769 HOH HOH . 
G 5 HOH A 170 770 770 HOH HOH . 
G 5 HOH A 171 771 771 HOH HOH . 
G 5 HOH A 172 772 772 HOH HOH . 
G 5 HOH A 173 773 773 HOH HOH . 
G 5 HOH A 174 774 774 HOH HOH . 
G 5 HOH A 175 775 775 HOH HOH . 
G 5 HOH A 176 776 776 HOH HOH . 
G 5 HOH A 177 777 777 HOH HOH . 
G 5 HOH A 178 778 778 HOH HOH . 
G 5 HOH A 179 779 779 HOH HOH . 
G 5 HOH A 180 780 780 HOH HOH . 
G 5 HOH A 181 781 781 HOH HOH . 
G 5 HOH A 182 782 782 HOH HOH . 
G 5 HOH A 183 783 783 HOH HOH . 
G 5 HOH A 184 784 784 HOH HOH . 
G 5 HOH A 185 785 785 HOH HOH . 
G 5 HOH A 186 786 786 HOH HOH . 
G 5 HOH A 187 787 787 HOH HOH . 
G 5 HOH A 188 788 788 HOH HOH . 
G 5 HOH A 189 789 789 HOH HOH . 
G 5 HOH A 190 790 790 HOH HOH . 
G 5 HOH A 191 791 791 HOH HOH . 
G 5 HOH A 192 792 792 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S1 DTT . . . F 4 30.145 18.768 103.91 0.75 38.29 ? S1 DTT 505 A 1 
HETATM 2 C C1 DTT . . . F 4 31.143 17.501 103.09 0.75 34.67 ? C1 DTT 505 A 1 
HETATM 3 C C2 DTT . . . F 4 30.903 17.48 101.585 0.75 42 ? C2 DTT 505 A 1 
HETATM 4 O O2 DTT . . . F 4 29.542 17.204 101.335 0.75 34.19 ? O2 DTT 505 A 1 
HETATM 5 C C3 DTT . . . F 4 31.774 16.438 100.892 0.75 44.07 ? C3 DTT 505 A 1 
HETATM 6 O O3 DTT . . . F 4 31.635 16.572 99.495 0.75 41.09 ? O3 DTT 505 A 1 
HETATM 7 C C4 DTT . . . F 4 33.241 16.609 101.266 0.75 44.48 ? C4 DTT 505 A 1 
HETATM 8 S S4 DTT . . . F 4 34.318 15.449 100.388 0.75 66.29 ? S4 DTT 505 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    25 
_model_server_stats.query_time_ms           227 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           8 
#