data_7VKT # _model_server_result.job_id SaSNET0kVKKajs-LowEPSw _model_server_result.datetime_utc '2024-10-11 00:27:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7vkt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":401}' # _entry.id 7VKT # _exptl.entry_id 7VKT _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 336.466 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'LEUKOTRIENE B4' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7VKT _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7VKT _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 90 A CYS 90 1_555 A SG CYS 168 A CYS 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf2 E SG CYS 159 E CYS 160 1_555 E SG CYS 229 E CYS 230 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? # _chem_comp.formula 'C20 H32 O4' _chem_comp.formula_weight 336.466 _chem_comp.id LTB _chem_comp.mon_nstd_flag . _chem_comp.name 'LEUKOTRIENE B4' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7VKT _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 6 LTB A 1 401 401 LTB LTB . G 7 Y01 A 1 402 1101 Y01 Y01 . H 7 Y01 A 1 403 1201 Y01 Y01 . I 7 Y01 A 1 404 1301 Y01 Y01 . J 7 Y01 A 1 405 1401 Y01 Y01 . K 8 8IO A 1 406 1501 8IO P18 . L 9 HOH A 1 501 1 HOH HOH . L 9 HOH A 2 502 2 HOH HOH . L 9 HOH A 3 503 6 HOH HOH . L 9 HOH A 4 504 3 HOH HOH . L 9 HOH A 5 505 5 HOH HOH . L 9 HOH A 6 506 7 HOH HOH . L 9 HOH A 7 507 4 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 LTB . . . F 6 128.839 146.089 102.698 1 53.2 ? O1 LTB 401 A 1 HETATM 2 C C1 LTB . . . F 6 128.965 146.426 103.939 1 53.2 ? C1 LTB 401 A 1 HETATM 3 O O2 LTB . . . F 6 128.801 147.556 104.39 1 53.2 ? O2 LTB 401 A 1 HETATM 4 C C2 LTB . . . F 6 129.351 145.237 104.84 1 53.2 ? C2 LTB 401 A 1 HETATM 5 C C3 LTB . . . F 6 129.045 145.47 106.302 1 53.2 ? C3 LTB 401 A 1 HETATM 6 C C4 LTB . . . F 6 130.324 145.795 107.047 1 53.2 ? C4 LTB 401 A 1 HETATM 7 C C5 LTB . . . F 6 130.444 147.293 107.285 1 53.2 ? C5 LTB 401 A 1 HETATM 8 O O3 LTB . . . F 6 130.288 148.041 106.117 1 53.2 ? O3 LTB 401 A 1 HETATM 9 C C6 LTB . . . F 6 131.752 147.621 107.943 1 53.2 ? C6 LTB 401 A 1 HETATM 10 C C7 LTB . . . F 6 131.994 147.301 109.212 1 53.2 ? C7 LTB 401 A 1 HETATM 11 C C8 LTB . . . F 6 133.261 147.627 109.843 1 53.2 ? C8 LTB 401 A 1 HETATM 12 C C9 LTB . . . F 6 134.206 148.315 109.203 1 53.2 ? C9 LTB 401 A 1 HETATM 13 C C10 LTB . . . F 6 135.471 148.643 109.834 1 53.2 ? C10 LTB 401 A 1 HETATM 14 C C11 LTB . . . F 6 136.433 149.233 109.128 1 53.2 ? C11 LTB 401 A 1 HETATM 15 C C12 LTB . . . F 6 137.752 149.592 109.74 1 53.2 ? C12 LTB 401 A 1 HETATM 16 C C20 LTB . . . F 6 142.226 144.093 114.892 1 53.2 ? C20 LTB 401 A 1 HETATM 17 O O12 LTB . . . F 6 138.545 150.326 108.854 1 53.2 ? O12 LTB 401 A 1 HETATM 18 C C19 LTB . . . F 6 142.238 144.257 113.392 1 53.2 ? C19 LTB 401 A 1 HETATM 19 C C18 LTB . . . F 6 141.871 145.679 113.029 1 53.2 ? C18 LTB 401 A 1 HETATM 20 C C17 LTB . . . F 6 141.674 145.8 111.533 1 53.2 ? C17 LTB 401 A 1 HETATM 21 C C16 LTB . . . F 6 140.303 146.373 111.26 1 53.2 ? C16 LTB 401 A 1 HETATM 22 C C15 LTB . . . F 6 140.202 147.733 111.847 1 53.2 ? C15 LTB 401 A 1 HETATM 23 C C14 LTB . . . F 6 139.368 148.637 111.349 1 53.2 ? C14 LTB 401 A 1 HETATM 24 C C13 LTB . . . F 6 138.492 148.329 110.185 1 53.2 ? C13 LTB 401 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 24 #