data_7VLN # _model_server_result.job_id Q3PAOfAw2_ZC0xuQcM-vvw _model_server_result.datetime_utc '2025-02-28 12:53:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7vln # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 7VLN # _exptl.entry_id 7VLN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 348.398 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[5-[4-(aminomethyl)-2,6-dimethoxy-phenyl]-3-methyl-imidazol-4-yl]benzenecarbonitrile _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7VLN _cell.length_a 70.12 _cell.length_b 70.12 _cell.length_c 230.67 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7VLN _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall 'P 31 2"' _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A 1 1 B,D 2 1 C 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H20 N4 O2' _chem_comp.formula_weight 348.398 _chem_comp.id 7QC _chem_comp.mon_nstd_flag . _chem_comp.name 4-[5-[4-(aminomethyl)-2,6-dimethoxy-phenyl]-3-methyl-imidazol-4-yl]benzenecarbonitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N13 C12 7QC sing 1 n n C12 C11 7QC sing 2 n n C11 C14 7QC doub 3 n y C11 C10 7QC sing 4 n y C17 O16 7QC sing 5 n n C14 C15 7QC sing 6 n y C10 C07 7QC doub 7 n y C15 O16 7QC sing 8 n n C15 C06 7QC doub 9 n y C07 C06 7QC sing 10 n y C07 O08 7QC sing 11 n n C06 C05 7QC sing 12 n n O08 C09 7QC sing 13 n n N04 C05 7QC sing 14 n y N04 C03 7QC doub 15 n y C05 C18 7QC doub 16 n y C03 N02 7QC sing 17 n y C18 C19 7QC sing 18 n n C18 N02 7QC sing 19 n y C26 C19 7QC doub 20 n y C26 C25 7QC sing 21 n y C19 C20 7QC sing 22 n y N02 C01 7QC sing 23 n n C25 C22 7QC doub 24 n y C20 C21 7QC doub 25 n y C22 C21 7QC sing 26 n y C22 C23 7QC sing 27 n n C23 N24 7QC trip 28 n n C10 H1 7QC sing 29 n n C17 H2 7QC sing 30 n n C17 H3 7QC sing 31 n n C17 H4 7QC sing 32 n n C20 H5 7QC sing 33 n n C21 H6 7QC sing 34 n n C26 H7 7QC sing 35 n n C01 H8 7QC sing 36 n n C01 H9 7QC sing 37 n n C01 H10 7QC sing 38 n n C03 H11 7QC sing 39 n n C09 H12 7QC sing 40 n n C09 H13 7QC sing 41 n n C09 H14 7QC sing 42 n n C12 H15 7QC sing 43 n n C12 H16 7QC sing 44 n n C14 H17 7QC sing 45 n n C25 H18 7QC sing 46 n n N13 H19 7QC sing 47 n n N13 H20 7QC sing 48 n n # _atom_sites.entry_id 7VLN _atom_sites.fract_transf_matrix[1][1] 0.014261 _atom_sites.fract_transf_matrix[1][2] 0.008234 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016467 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004335 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id D _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id 7QC _pdbx_nonpoly_scheme.pdb_strand_id B _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 401 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id 7QC _pdbx_nonpoly_scheme.auth_mon_id LIG _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 7QC . . . D 2 -26.545 -18.254 47.948 1 107.34 ? C10 7QC 401 B 1 HETATM 2 C C15 7QC . . . D 2 -23.811 -18.637 48.302 1 108.34 ? C15 7QC 401 B 1 HETATM 3 C C17 7QC . . . D 2 -21.632 -18.357 47.362 1 112.57 ? C17 7QC 401 B 1 HETATM 4 C C20 7QC . . . D 2 -26.361 -17.621 53.336 1 91.61 ? C20 7QC 401 B 1 HETATM 5 C C21 7QC . . . D 2 -27.438 -18.286 53.886 1 90.19 ? C21 7QC 401 B 1 HETATM 6 C C22 7QC . . . D 2 -27.538 -19.659 53.733 1 93.9 ? C22 7QC 401 B 1 HETATM 7 C C26 7QC . . . D 2 -25.501 -19.708 52.484 1 97.57 ? C26 7QC 401 B 1 HETATM 8 C C01 7QC . . . D 2 -23.278 -16.614 54.103 1 99.96 ? C01 7QC 401 B 1 HETATM 9 C C03 7QC . . . D 2 -22.496 -16.268 51.782 1 109.1 ? C03 7QC 401 B 1 HETATM 10 C C05 7QC . . . D 2 -23.916 -17.454 50.629 1 103.52 ? C05 7QC 401 B 1 HETATM 11 C C06 7QC . . . D 2 -24.565 -18.013 49.34 1 101.93 ? C06 7QC 401 B 1 HETATM 12 C C07 7QC . . . D 2 -25.934 -17.806 49.14 1 103.94 ? C07 7QC 401 B 1 HETATM 13 C C09 7QC . . . D 2 -27.977 -17.7 50.428 1 88.87 ? C09 7QC 401 B 1 HETATM 14 C C11 7QC . . . D 2 -25.811 -18.881 46.913 1 112.3 ? C11 7QC 401 B 1 HETATM 15 C C12 7QC . . . D 2 -26.562 -19.357 45.614 1 124.01 ? C12 7QC 401 B 1 HETATM 16 C C14 7QC . . . D 2 -24.424 -19.065 47.123 1 110.89 ? C14 7QC 401 B 1 HETATM 17 C C18 7QC . . . D 2 -24.223 -17.547 51.997 1 105.24 ? C18 7QC 401 B 1 HETATM 18 C C19 7QC . . . D 2 -25.397 -18.331 52.639 1 95.75 ? C19 7QC 401 B 1 HETATM 19 C C23 7QC . . . D 2 -28.725 -20.382 54.342 1 95.89 ? C23 7QC 401 B 1 HETATM 20 C C25 7QC . . . D 2 -26.575 -20.379 53.033 1 97.83 ? C25 7QC 401 B 1 HETATM 21 N N02 7QC . . . D 2 -23.341 -16.811 52.664 1 104.52 ? N02 7QC 401 B 1 HETATM 22 N N04 7QC . . . D 2 -22.872 -16.654 50.526 1 107.13 ? N04 7QC 401 B 1 HETATM 23 N N13 7QC . . . D 2 -26.088 -20.541 44.813 1 107.18 ? N13 7QC 401 B 1 HETATM 24 N N24 7QC . . . D 2 -29.601 -20.928 54.793 1 98.61 ? N24 7QC 401 B 1 HETATM 25 O O08 7QC . . . D 2 -26.677 -17.151 50.171 1 93.68 ? O08 7QC 401 B 1 HETATM 26 O O16 7QC . . . D 2 -22.415 -18.841 48.443 1 112.73 ? O16 7QC 401 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 26 #