data_7VNM # _model_server_result.job_id U57Tkr_RfAV8nmssXY9V1g _model_server_result.datetime_utc '2024-11-21 14:29:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7vnm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"LA","auth_seq_id":402}' # _entry.id 7VNM # _exptl.entry_id 7VNM _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 55.845 _entity.id 11 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7VNM _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7VNM _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 30-meric _pdbx_struct_assembly.oligomeric_count 30 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,WB,XB,YB,ZB,AC,BC,CC,DC,EC,FC,GC,HC,IC,JC,KC,LC,MC,NC,OC,PC,QC _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 11 _struct_asym.id LA _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 191 L HIS 190 1_555 LA FE FE2 . M FE2 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? metalc ? metalc2 A NE2 HIS 231 L HIS 230 1_555 LA FE FE2 . M FE2 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.517 ? metalc ? metalc3 B NE2 HIS 220 M HIS 219 1_555 LA FE FE2 . M FE2 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? metalc ? metalc4 B OE1 GLU 235 M GLU 234 1_555 LA FE FE2 . M FE2 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.474 ? metalc ? metalc5 B OE2 GLU 235 M GLU 234 1_555 LA FE FE2 . M FE2 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? metalc ? metalc6 B NE2 HIS 267 M HIS 266 1_555 LA FE FE2 . M FE2 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.537 ? # _chem_comp.formula 'Fe 2' _chem_comp.formula_weight 55.845 _chem_comp.id FE2 _chem_comp.mon_nstd_flag . _chem_comp.name 'FE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7VNM _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code EA 7 BCL L 1 301 852 BCL BCL . FA 8 BPH L 1 302 856 BPH BPH . GA 9 PC1 L 1 303 1201 PC1 PC1 . HA 10 U10 L 1 304 1401 U10 U10 . IA 7 BCL L 1 305 402 BCL BCL . JA 8 BPH L 1 306 855 BPH BPH . KA 7 BCL M 1 401 854 BCL BCL . LA 11 FE2 M 1 402 857 FE2 FE2 . MA 7 BCL M 1 403 853 BCL BCL . NA 10 U10 M 1 404 858 U10 U10 . OA 12 SPO M 1 405 1310 SPO SPO . PA 13 CDL M 1 406 1401 CDL CDL . QA 9 PC1 H 1 1101 1101 PC1 PC1 . RA 9 PC1 H 1 1102 701 PC1 PC1 . SA 9 PC1 H 1 1103 201 PC1 PC1 . TA 9 PC1 A 1 601 601 PC1 PC1 . UA 7 BCL A 1 602 101 BCL BCL . VA 12 SPO A 1 603 104 SPO SPO . WA 9 PC1 A 1 604 201 PC1 PC1 . XA 7 BCL A 1 605 101 BCL BCL . YA 7 BCL D 1 101 101 BCL BCL . ZA 12 SPO D 1 102 104 SPO SPO . AB 12 SPO D 1 103 105 SPO SPO . BB 12 SPO D 1 104 104 SPO SPO . CB 7 BCL E 1 101 101 BCL BCL . DB 12 SPO E 1 102 105 SPO SPO . EB 7 BCL F 1 101 101 BCL BCL . FB 7 BCL F 1 102 101 BCL BCL . GB 12 SPO F 1 103 104 SPO SPO . HB 7 BCL I 1 101 101 BCL BCL . IB 7 BCL I 1 102 101 BCL BCL . JB 12 SPO I 1 103 105 SPO SPO . KB 12 SPO I 1 104 104 SPO SPO . LB 7 BCL K 1 101 101 BCL BCL . MB 12 SPO K 1 102 105 SPO SPO . NB 12 SPO K 1 103 104 SPO SPO . OB 7 BCL N 1 101 101 BCL BCL . PB 7 BCL O 1 101 101 BCL BCL . QB 7 BCL O 1 102 101 BCL BCL . RB 12 SPO P 1 101 105 SPO SPO . SB 12 SPO P 1 102 105 SPO SPO . TB 7 BCL Q 1 101 101 BCL BCL . UB 12 SPO Q 1 102 104 SPO SPO . VB 12 SPO R 1 101 104 SPO SPO . WB 7 BCL R 1 102 101 BCL BCL . XB 12 SPO R 1 103 105 SPO SPO . YB 7 BCL S 1 101 101 BCL BCL . ZB 7 BCL S 1 102 101 BCL BCL . AC 12 SPO S 1 103 104 SPO SPO . BC 7 BCL U 1 101 101 BCL BCL . CC 7 BCL U 1 102 101 BCL BCL . DC 12 SPO U 1 103 105 SPO SPO . EC 7 BCL W 1 101 101 BCL BCL . FC 7 BCL C 1 101 101 BCL BCL . GC 7 BCL 7 1 101 101 BCL BCL . HC 12 SPO 8 1 101 104 SPO SPO . IC 7 BCL 8 1 102 101 BCL BCL . JC 7 BCL 9 1 101 101 BCL BCL . KC 12 SPO 9 1 102 104 SPO SPO . LC 7 BCL 9 1 103 101 BCL BCL . MC 12 SPO 0 1 101 105 SPO SPO . NC 12 SPO 0 1 102 105 SPO SPO . OC 9 PC1 X 1 1501 1501 PC1 PC1 . PC 7 BCL 1 1 101 101 BCL BCL . QC 7 BCL 2 1 101 101 BCL BCL . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol FE _atom_site.label_atom_id FE _atom_site.label_comp_id FE2 _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id LA _atom_site.label_entity_id 11 _atom_site.Cartn_x 109.66 _atom_site.Cartn_y 126.167 _atom_site.Cartn_z 136.618 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 13.2 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id FE _atom_site.auth_comp_id FE2 _atom_site.auth_seq_id 402 _atom_site.auth_asym_id M _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #