data_7VOA
#
_model_server_result.job_id            kuLDfc8Ri6pfZwTxCufKgQ 
_model_server_result.datetime_utc      '2025-01-28 23:02:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7voa 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":601}' 
#
_entry.id    7VOA 
#
_exptl.entry_id    7VOA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7VOA 
_cell.length_a            53.44 
_cell.length_b            87.7 
_cell.length_c            89.05 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7VOA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 22 A CYS 22 1_555 A SG CYS 96 A CYS 96 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.051 ? 
disulf ? disulf2 A SG CYS 22 A CYS 22 1_555 A SG CYS 96 A CYS 96 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.061 ? 
disulf ? disulf3 A SG CYS 50 A CYS 50 1_555 A SG CYS 107 A CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? 
disulf ? disulf4 B SG CYS 16 B CYS 336 1_555 B SG CYS 41 B CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
disulf ? disulf5 B SG CYS 59 B CYS 379 1_555 B SG CYS 112 B CYS 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? 
disulf ? disulf6 B SG CYS 71 B CYS 391 1_555 B SG CYS 205 B CYS 525 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf7 B SG CYS 71 B CYS 391 1_555 B SG CYS 205 B CYS 525 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf8 B SG CYS 160 B CYS 480 1_555 B SG CYS 168 B CYS 488 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? 
covale ? covale1 B ND2 ASN 23 B ASN 343 1_555 C C1 NAG . B NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.435 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 237 n n 
C1 O1 NAG sing 238 n n 
C1 O5 NAG sing 239 n n 
C1 H1 NAG sing 240 n n 
C2 C3 NAG sing 241 n n 
C2 N2 NAG sing 242 n n 
C2 H2 NAG sing 243 n n 
C3 C4 NAG sing 244 n n 
C3 O3 NAG sing 245 n n 
C3 H3 NAG sing 246 n n 
C4 C5 NAG sing 247 n n 
C4 O4 NAG sing 248 n n 
C4 H4 NAG sing 249 n n 
C5 C6 NAG sing 250 n n 
C5 O5 NAG sing 251 n n 
C5 H5 NAG sing 252 n n 
C6 O6 NAG sing 253 n n 
C6 H61 NAG sing 254 n n 
C6 H62 NAG sing 255 n n 
C7 C8 NAG sing 256 n n 
C7 N2 NAG sing 257 n n 
C7 O7 NAG doub 258 n n 
C8 H81 NAG sing 259 n n 
C8 H82 NAG sing 260 n n 
C8 H83 NAG sing 261 n n 
N2 HN2 NAG sing 262 n n 
O1 HO1 NAG sing 263 n n 
O3 HO3 NAG sing 264 n n 
O4 HO4 NAG sing 265 n n 
O6 HO6 NAG sing 266 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     7VOA 
_atom_sites.fract_transf_matrix[1][1]    0.018713 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011403 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01123 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 NAG B 1 601 601 NAG NAG . 
D 4 HOH A 1 201 55 HOH HOH . 
D 4 HOH A 2 202 141 HOH HOH . 
D 4 HOH A 3 203 103 HOH HOH . 
D 4 HOH A 4 204 145 HOH HOH . 
D 4 HOH A 5 205 54 HOH HOH . 
D 4 HOH A 6 206 47 HOH HOH . 
D 4 HOH A 7 207 59 HOH HOH . 
D 4 HOH A 8 208 22 HOH HOH . 
D 4 HOH A 9 209 62 HOH HOH . 
D 4 HOH A 10 210 78 HOH HOH . 
D 4 HOH A 11 211 66 HOH HOH . 
D 4 HOH A 12 212 34 HOH HOH . 
D 4 HOH A 13 213 30 HOH HOH . 
D 4 HOH A 14 214 158 HOH HOH . 
D 4 HOH A 15 215 7 HOH HOH . 
D 4 HOH A 16 216 49 HOH HOH . 
D 4 HOH A 17 217 119 HOH HOH . 
D 4 HOH A 18 218 123 HOH HOH . 
D 4 HOH A 19 219 31 HOH HOH . 
D 4 HOH A 20 220 21 HOH HOH . 
D 4 HOH A 21 221 79 HOH HOH . 
D 4 HOH A 22 222 64 HOH HOH . 
D 4 HOH A 23 223 130 HOH HOH . 
D 4 HOH A 24 224 114 HOH HOH . 
D 4 HOH A 25 225 27 HOH HOH . 
D 4 HOH A 26 226 152 HOH HOH . 
D 4 HOH A 27 227 58 HOH HOH . 
D 4 HOH A 28 228 39 HOH HOH . 
D 4 HOH A 29 229 33 HOH HOH . 
D 4 HOH A 30 230 115 HOH HOH . 
D 4 HOH A 31 231 42 HOH HOH . 
D 4 HOH A 32 232 11 HOH HOH . 
D 4 HOH A 33 233 51 HOH HOH . 
D 4 HOH A 34 234 43 HOH HOH . 
D 4 HOH A 35 235 146 HOH HOH . 
D 4 HOH A 36 236 76 HOH HOH . 
D 4 HOH A 37 237 95 HOH HOH . 
D 4 HOH A 38 238 41 HOH HOH . 
D 4 HOH A 39 239 53 HOH HOH . 
D 4 HOH A 40 240 10 HOH HOH . 
D 4 HOH A 41 241 18 HOH HOH . 
D 4 HOH A 42 242 131 HOH HOH . 
D 4 HOH A 43 243 19 HOH HOH . 
D 4 HOH A 44 244 70 HOH HOH . 
D 4 HOH A 45 245 85 HOH HOH . 
D 4 HOH A 46 246 110 HOH HOH . 
D 4 HOH A 47 247 65 HOH HOH . 
D 4 HOH A 48 248 109 HOH HOH . 
D 4 HOH A 49 249 50 HOH HOH . 
D 4 HOH A 50 250 151 HOH HOH . 
D 4 HOH A 51 251 86 HOH HOH . 
D 4 HOH A 52 252 75 HOH HOH . 
D 4 HOH A 53 253 116 HOH HOH . 
D 4 HOH A 54 254 45 HOH HOH . 
D 4 HOH A 55 255 126 HOH HOH . 
D 4 HOH A 56 256 160 HOH HOH . 
D 4 HOH A 57 257 26 HOH HOH . 
D 4 HOH A 58 258 98 HOH HOH . 
D 4 HOH A 59 259 107 HOH HOH . 
D 4 HOH A 60 260 134 HOH HOH . 
D 4 HOH A 61 261 165 HOH HOH . 
D 4 HOH A 62 262 112 HOH HOH . 
D 4 HOH A 63 263 127 HOH HOH . 
D 4 HOH A 64 264 97 HOH HOH . 
D 4 HOH A 65 265 121 HOH HOH . 
D 4 HOH A 66 266 124 HOH HOH . 
D 4 HOH A 67 267 118 HOH HOH . 
D 4 HOH A 68 268 143 HOH HOH . 
D 4 HOH A 69 269 164 HOH HOH . 
D 4 HOH A 70 270 159 HOH HOH . 
D 4 HOH A 71 271 87 HOH HOH . 
D 4 HOH A 72 272 167 HOH HOH . 
D 4 HOH A 73 273 99 HOH HOH . 
D 4 HOH A 74 274 150 HOH HOH . 
D 4 HOH A 75 275 175 HOH HOH . 
D 4 HOH A 76 276 153 HOH HOH . 
D 4 HOH A 77 277 25 HOH HOH . 
D 4 HOH A 78 278 73 HOH HOH . 
D 4 HOH A 79 279 172 HOH HOH . 
D 4 HOH A 80 280 129 HOH HOH . 
E 4 HOH B 1 701 108 HOH HOH . 
E 4 HOH B 2 702 135 HOH HOH . 
E 4 HOH B 3 703 2 HOH HOH . 
E 4 HOH B 4 704 178 HOH HOH . 
E 4 HOH B 5 705 12 HOH HOH . 
E 4 HOH B 6 706 179 HOH HOH . 
E 4 HOH B 7 707 52 HOH HOH . 
E 4 HOH B 8 708 71 HOH HOH . 
E 4 HOH B 9 709 17 HOH HOH . 
E 4 HOH B 10 710 8 HOH HOH . 
E 4 HOH B 11 711 57 HOH HOH . 
E 4 HOH B 12 712 48 HOH HOH . 
E 4 HOH B 13 713 38 HOH HOH . 
E 4 HOH B 14 714 74 HOH HOH . 
E 4 HOH B 15 715 149 HOH HOH . 
E 4 HOH B 16 716 96 HOH HOH . 
E 4 HOH B 17 717 44 HOH HOH . 
E 4 HOH B 18 718 122 HOH HOH . 
E 4 HOH B 19 719 94 HOH HOH . 
E 4 HOH B 20 720 20 HOH HOH . 
E 4 HOH B 21 721 28 HOH HOH . 
E 4 HOH B 22 722 68 HOH HOH . 
E 4 HOH B 23 723 4 HOH HOH . 
E 4 HOH B 24 724 5 HOH HOH . 
E 4 HOH B 25 725 83 HOH HOH . 
E 4 HOH B 26 726 3 HOH HOH . 
E 4 HOH B 27 727 67 HOH HOH . 
E 4 HOH B 28 728 14 HOH HOH . 
E 4 HOH B 29 729 117 HOH HOH . 
E 4 HOH B 30 730 106 HOH HOH . 
E 4 HOH B 31 731 154 HOH HOH . 
E 4 HOH B 32 732 63 HOH HOH . 
E 4 HOH B 33 733 80 HOH HOH . 
E 4 HOH B 34 734 168 HOH HOH . 
E 4 HOH B 35 735 137 HOH HOH . 
E 4 HOH B 36 736 6 HOH HOH . 
E 4 HOH B 37 737 23 HOH HOH . 
E 4 HOH B 38 738 46 HOH HOH . 
E 4 HOH B 39 739 15 HOH HOH . 
E 4 HOH B 40 740 147 HOH HOH . 
E 4 HOH B 41 741 72 HOH HOH . 
E 4 HOH B 42 742 37 HOH HOH . 
E 4 HOH B 43 743 24 HOH HOH . 
E 4 HOH B 44 744 40 HOH HOH . 
E 4 HOH B 45 745 60 HOH HOH . 
E 4 HOH B 46 746 13 HOH HOH . 
E 4 HOH B 47 747 29 HOH HOH . 
E 4 HOH B 48 748 9 HOH HOH . 
E 4 HOH B 49 749 82 HOH HOH . 
E 4 HOH B 50 750 125 HOH HOH . 
E 4 HOH B 51 751 69 HOH HOH . 
E 4 HOH B 52 752 36 HOH HOH . 
E 4 HOH B 53 753 84 HOH HOH . 
E 4 HOH B 54 754 32 HOH HOH . 
E 4 HOH B 55 755 174 HOH HOH . 
E 4 HOH B 56 756 35 HOH HOH . 
E 4 HOH B 57 757 111 HOH HOH . 
E 4 HOH B 58 758 162 HOH HOH . 
E 4 HOH B 59 759 163 HOH HOH . 
E 4 HOH B 60 760 132 HOH HOH . 
E 4 HOH B 61 761 100 HOH HOH . 
E 4 HOH B 62 762 1 HOH HOH . 
E 4 HOH B 63 763 56 HOH HOH . 
E 4 HOH B 64 764 105 HOH HOH . 
E 4 HOH B 65 765 142 HOH HOH . 
E 4 HOH B 66 766 88 HOH HOH . 
E 4 HOH B 67 767 104 HOH HOH . 
E 4 HOH B 68 768 161 HOH HOH . 
E 4 HOH B 69 769 90 HOH HOH . 
E 4 HOH B 70 770 91 HOH HOH . 
E 4 HOH B 71 771 170 HOH HOH . 
E 4 HOH B 72 772 61 HOH HOH . 
E 4 HOH B 73 773 133 HOH HOH . 
E 4 HOH B 74 774 157 HOH HOH . 
E 4 HOH B 75 775 177 HOH HOH . 
E 4 HOH B 76 776 120 HOH HOH . 
E 4 HOH B 77 777 166 HOH HOH . 
E 4 HOH B 78 778 128 HOH HOH . 
E 4 HOH B 79 779 171 HOH HOH . 
E 4 HOH B 80 780 81 HOH HOH . 
E 4 HOH B 81 781 92 HOH HOH . 
E 4 HOH B 82 782 93 HOH HOH . 
E 4 HOH B 83 783 176 HOH HOH . 
E 4 HOH B 84 784 169 HOH HOH . 
E 4 HOH B 85 785 155 HOH HOH . 
E 4 HOH B 86 786 173 HOH HOH . 
E 4 HOH B 87 787 139 HOH HOH . 
E 4 HOH B 88 788 101 HOH HOH . 
E 4 HOH B 89 789 140 HOH HOH . 
E 4 HOH B 90 790 77 HOH HOH . 
E 4 HOH B 91 791 144 HOH HOH . 
E 4 HOH B 92 792 102 HOH HOH . 
E 4 HOH B 93 793 148 HOH HOH . 
E 4 HOH B 94 794 138 HOH HOH . 
E 4 HOH B 95 795 113 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . C 3 -55.236 -36.464 22.039 1 73.07 ? C1 NAG 601 B 1 
HETATM 2 C C2 NAG . . . C 3 -56.117 -37.638 21.678 1 75.42 ? C2 NAG 601 B 1 
HETATM 3 C C3 NAG . . . C 3 -56.66 -37.473 20.256 1 81.25 ? C3 NAG 601 B 1 
HETATM 4 C C4 NAG . . . C 3 -57.395 -36.149 20.108 1 84.24 ? C4 NAG 601 B 1 
HETATM 5 C C5 NAG . . . C 3 -56.468 -35.006 20.489 1 82.92 ? C5 NAG 601 B 1 
HETATM 6 C C6 NAG . . . C 3 -57.139 -33.641 20.496 1 88.35 ? C6 NAG 601 B 1 
HETATM 7 C C7 NAG . . . C 3 -55.831 -39.99 22.356 1 68.52 ? C7 NAG 601 B 1 
HETATM 8 C C8 NAG . . . C 3 -54.886 -41.16 22.404 1 61.96 ? C8 NAG 601 B 1 
HETATM 9 N N2 NAG . . . C 3 -55.353 -38.871 21.797 1 70.94 ? N2 NAG 601 B 1 
HETATM 10 O O3 NAG . . . C 3 -57.532 -38.549 19.924 1 83.67 ? O3 NAG 601 B 1 
HETATM 11 O O4 NAG . . . C 3 -57.834 -35.998 18.76 1 86.39 ? O4 NAG 601 B 1 
HETATM 12 O O5 NAG . . . C 3 -55.952 -35.223 21.81 1 78.17 ? O5 NAG 601 B 1 
HETATM 13 O O6 NAG . . . C 3 -58.094 -33.449 21.536 1 91.25 ? O6 NAG 601 B 1 
HETATM 14 O O7 NAG . . . C 3 -56.973 -40.057 22.8 1 71.89 ? O7 NAG 601 B 1 
#
_model_server_stats.io_time_ms              55 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           381 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           14 
#