data_7VPY # _model_server_result.job_id '_Os09Wg2zi16HUjSe9fGhw' _model_server_result.datetime_utc '2024-11-16 06:40:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7vpy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 7VPY # _exptl.entry_id 7VPY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.758 _cell.angle_gamma 90 _cell.entry_id 7VPY _cell.length_a 105.078 _cell.length_b 43.166 _cell.length_c 56.027 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7VPY _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,M 1 1 B,H,I,J,K,L,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 44 A CYS 22 1_555 A SG CYS 116 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? disulf ? disulf2 B SG CYS 44 B CYS 22 1_555 B SG CYS 116 B CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 299 n n S O2 SO4 doub 300 n n S O3 SO4 sing 301 n n S O4 SO4 sing 302 n n # _atom_sites.entry_id 7VPY _atom_sites.fract_transf_matrix[1][1] 0.009517 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003607 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023166 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019088 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 201 5 SO4 SO4 . D 2 SO4 A 1 202 6 SO4 SO4 . E 2 SO4 A 1 203 7 SO4 SO4 . F 2 SO4 A 1 204 8 SO4 SO4 . G 2 SO4 A 1 205 9 SO4 SO4 . H 3 EDO B 1 201 201 EDO EDO . I 2 SO4 B 1 202 1 SO4 SO4 . J 2 SO4 B 1 203 2 SO4 SO4 . K 2 SO4 B 1 204 3 SO4 SO4 . L 2 SO4 B 1 205 4 SO4 SO4 . M 4 HOH A 1 301 219 HOH HOH . M 4 HOH A 2 302 223 HOH HOH . M 4 HOH A 3 303 233 HOH HOH . M 4 HOH A 4 304 60 HOH HOH . M 4 HOH A 5 305 67 HOH HOH . M 4 HOH A 6 306 130 HOH HOH . M 4 HOH A 7 307 229 HOH HOH . M 4 HOH A 8 308 47 HOH HOH . M 4 HOH A 9 309 221 HOH HOH . M 4 HOH A 10 310 212 HOH HOH . M 4 HOH A 11 311 242 HOH HOH . M 4 HOH A 12 312 78 HOH HOH . M 4 HOH A 13 313 121 HOH HOH . M 4 HOH A 14 314 184 HOH HOH . M 4 HOH A 15 315 103 HOH HOH . M 4 HOH A 16 316 116 HOH HOH . M 4 HOH A 17 317 14 HOH HOH . M 4 HOH A 18 318 19 HOH HOH . M 4 HOH A 19 319 7 HOH HOH . M 4 HOH A 20 320 31 HOH HOH . M 4 HOH A 21 321 110 HOH HOH . M 4 HOH A 22 322 36 HOH HOH . M 4 HOH A 23 323 12 HOH HOH . M 4 HOH A 24 324 200 HOH HOH . M 4 HOH A 25 325 220 HOH HOH . M 4 HOH A 26 326 33 HOH HOH . M 4 HOH A 27 327 236 HOH HOH . M 4 HOH A 28 328 82 HOH HOH . M 4 HOH A 29 329 133 HOH HOH . M 4 HOH A 30 330 225 HOH HOH . M 4 HOH A 31 331 49 HOH HOH . M 4 HOH A 32 332 6 HOH HOH . M 4 HOH A 33 333 57 HOH HOH . M 4 HOH A 34 334 100 HOH HOH . M 4 HOH A 35 335 29 HOH HOH . M 4 HOH A 36 336 187 HOH HOH . M 4 HOH A 37 337 174 HOH HOH . M 4 HOH A 38 338 90 HOH HOH . M 4 HOH A 39 339 11 HOH HOH . M 4 HOH A 40 340 8 HOH HOH . M 4 HOH A 41 341 15 HOH HOH . M 4 HOH A 42 342 50 HOH HOH . M 4 HOH A 43 343 51 HOH HOH . M 4 HOH A 44 344 54 HOH HOH . M 4 HOH A 45 345 46 HOH HOH . M 4 HOH A 46 346 97 HOH HOH . M 4 HOH A 47 347 55 HOH HOH . M 4 HOH A 48 348 228 HOH HOH . M 4 HOH A 49 349 171 HOH HOH . M 4 HOH A 50 350 152 HOH HOH . M 4 HOH A 51 351 227 HOH HOH . M 4 HOH A 52 352 214 HOH HOH . M 4 HOH A 53 353 43 HOH HOH . M 4 HOH A 54 354 248 HOH HOH . M 4 HOH A 55 355 205 HOH HOH . M 4 HOH A 56 356 230 HOH HOH . M 4 HOH A 57 357 45 HOH HOH . M 4 HOH A 58 358 95 HOH HOH . M 4 HOH A 59 359 24 HOH HOH . M 4 HOH A 60 360 48 HOH HOH . M 4 HOH A 61 361 226 HOH HOH . M 4 HOH A 62 362 96 HOH HOH . M 4 HOH A 63 363 28 HOH HOH . M 4 HOH A 64 364 89 HOH HOH . M 4 HOH A 65 365 204 HOH HOH . M 4 HOH A 66 366 177 HOH HOH . M 4 HOH A 67 367 222 HOH HOH . M 4 HOH A 68 368 126 HOH HOH . M 4 HOH A 69 369 141 HOH HOH . M 4 HOH A 70 370 17 HOH HOH . M 4 HOH A 71 371 162 HOH HOH . M 4 HOH A 72 372 188 HOH HOH . M 4 HOH A 73 373 209 HOH HOH . M 4 HOH A 74 374 202 HOH HOH . M 4 HOH A 75 375 195 HOH HOH . M 4 HOH A 76 376 132 HOH HOH . M 4 HOH A 77 377 176 HOH HOH . M 4 HOH A 78 378 206 HOH HOH . M 4 HOH A 79 379 84 HOH HOH . M 4 HOH A 80 380 198 HOH HOH . M 4 HOH A 81 381 232 HOH HOH . M 4 HOH A 82 382 63 HOH HOH . M 4 HOH A 83 383 85 HOH HOH . M 4 HOH A 84 384 40 HOH HOH . M 4 HOH A 85 385 91 HOH HOH . M 4 HOH A 86 386 224 HOH HOH . M 4 HOH A 87 387 134 HOH HOH . M 4 HOH A 88 388 159 HOH HOH . M 4 HOH A 89 389 163 HOH HOH . M 4 HOH A 90 390 194 HOH HOH . M 4 HOH A 91 391 207 HOH HOH . M 4 HOH A 92 392 104 HOH HOH . M 4 HOH A 93 393 154 HOH HOH . M 4 HOH A 94 394 165 HOH HOH . M 4 HOH A 95 395 105 HOH HOH . M 4 HOH A 96 396 37 HOH HOH . M 4 HOH A 97 397 237 HOH HOH . M 4 HOH A 98 398 125 HOH HOH . M 4 HOH A 99 399 157 HOH HOH . M 4 HOH A 100 400 44 HOH HOH . M 4 HOH A 101 401 235 HOH HOH . N 4 HOH B 1 301 244 HOH HOH . N 4 HOH B 2 302 243 HOH HOH . N 4 HOH B 3 303 74 HOH HOH . N 4 HOH B 4 304 148 HOH HOH . N 4 HOH B 5 305 241 HOH HOH . N 4 HOH B 6 306 129 HOH HOH . N 4 HOH B 7 307 94 HOH HOH . N 4 HOH B 8 308 144 HOH HOH . N 4 HOH B 9 309 25 HOH HOH . N 4 HOH B 10 310 75 HOH HOH . N 4 HOH B 11 311 59 HOH HOH . N 4 HOH B 12 312 191 HOH HOH . N 4 HOH B 13 313 42 HOH HOH . N 4 HOH B 14 314 113 HOH HOH . N 4 HOH B 15 315 69 HOH HOH . N 4 HOH B 16 316 56 HOH HOH . N 4 HOH B 17 317 10 HOH HOH . N 4 HOH B 18 318 109 HOH HOH . N 4 HOH B 19 319 83 HOH HOH . N 4 HOH B 20 320 70 HOH HOH . N 4 HOH B 21 321 80 HOH HOH . N 4 HOH B 22 322 5 HOH HOH . N 4 HOH B 23 323 52 HOH HOH . N 4 HOH B 24 324 34 HOH HOH . N 4 HOH B 25 325 149 HOH HOH . N 4 HOH B 26 326 178 HOH HOH . N 4 HOH B 27 327 68 HOH HOH . N 4 HOH B 28 328 16 HOH HOH . N 4 HOH B 29 329 142 HOH HOH . N 4 HOH B 30 330 9 HOH HOH . N 4 HOH B 31 331 186 HOH HOH . N 4 HOH B 32 332 139 HOH HOH . N 4 HOH B 33 333 234 HOH HOH . N 4 HOH B 34 334 32 HOH HOH . N 4 HOH B 35 335 118 HOH HOH . N 4 HOH B 36 336 58 HOH HOH . N 4 HOH B 37 337 246 HOH HOH . N 4 HOH B 38 338 183 HOH HOH . N 4 HOH B 39 339 169 HOH HOH . N 4 HOH B 40 340 98 HOH HOH . N 4 HOH B 41 341 120 HOH HOH . N 4 HOH B 42 342 26 HOH HOH . N 4 HOH B 43 343 41 HOH HOH . N 4 HOH B 44 344 88 HOH HOH . N 4 HOH B 45 345 245 HOH HOH . N 4 HOH B 46 346 27 HOH HOH . N 4 HOH B 47 347 64 HOH HOH . N 4 HOH B 48 348 93 HOH HOH . N 4 HOH B 49 349 102 HOH HOH . N 4 HOH B 50 350 71 HOH HOH . N 4 HOH B 51 351 81 HOH HOH . N 4 HOH B 52 352 23 HOH HOH . N 4 HOH B 53 353 146 HOH HOH . N 4 HOH B 54 354 72 HOH HOH . N 4 HOH B 55 355 106 HOH HOH . N 4 HOH B 56 356 247 HOH HOH . N 4 HOH B 57 357 86 HOH HOH . N 4 HOH B 58 358 122 HOH HOH . N 4 HOH B 59 359 76 HOH HOH . N 4 HOH B 60 360 35 HOH HOH . N 4 HOH B 61 361 18 HOH HOH . N 4 HOH B 62 362 79 HOH HOH . N 4 HOH B 63 363 87 HOH HOH . N 4 HOH B 64 364 238 HOH HOH . N 4 HOH B 65 365 127 HOH HOH . N 4 HOH B 66 366 145 HOH HOH . N 4 HOH B 67 367 73 HOH HOH . N 4 HOH B 68 368 21 HOH HOH . N 4 HOH B 69 369 218 HOH HOH . N 4 HOH B 70 370 210 HOH HOH . N 4 HOH B 71 371 66 HOH HOH . N 4 HOH B 72 372 117 HOH HOH . N 4 HOH B 73 373 180 HOH HOH . N 4 HOH B 74 374 39 HOH HOH . N 4 HOH B 75 375 99 HOH HOH . N 4 HOH B 76 376 22 HOH HOH . N 4 HOH B 77 377 20 HOH HOH . N 4 HOH B 78 378 61 HOH HOH . N 4 HOH B 79 379 123 HOH HOH . N 4 HOH B 80 380 172 HOH HOH . N 4 HOH B 81 381 62 HOH HOH . N 4 HOH B 82 382 131 HOH HOH . N 4 HOH B 83 383 101 HOH HOH . N 4 HOH B 84 384 197 HOH HOH . N 4 HOH B 85 385 124 HOH HOH . N 4 HOH B 86 386 150 HOH HOH . N 4 HOH B 87 387 216 HOH HOH . N 4 HOH B 88 388 53 HOH HOH . N 4 HOH B 89 389 111 HOH HOH . N 4 HOH B 90 390 193 HOH HOH . N 4 HOH B 91 391 240 HOH HOH . N 4 HOH B 92 392 168 HOH HOH . N 4 HOH B 93 393 30 HOH HOH . N 4 HOH B 94 394 190 HOH HOH . N 4 HOH B 95 395 181 HOH HOH . N 4 HOH B 96 396 112 HOH HOH . N 4 HOH B 97 397 143 HOH HOH . N 4 HOH B 98 398 65 HOH HOH . N 4 HOH B 99 399 173 HOH HOH . N 4 HOH B 100 400 167 HOH HOH . N 4 HOH B 101 401 77 HOH HOH . N 4 HOH B 102 402 128 HOH HOH . N 4 HOH B 103 403 136 HOH HOH . N 4 HOH B 104 404 155 HOH HOH . N 4 HOH B 105 405 170 HOH HOH . N 4 HOH B 106 406 108 HOH HOH . N 4 HOH B 107 407 161 HOH HOH . N 4 HOH B 108 408 153 HOH HOH . N 4 HOH B 109 409 203 HOH HOH . N 4 HOH B 110 410 239 HOH HOH . N 4 HOH B 111 411 137 HOH HOH . N 4 HOH B 112 412 208 HOH HOH . N 4 HOH B 113 413 38 HOH HOH . N 4 HOH B 114 414 164 HOH HOH . N 4 HOH B 115 415 215 HOH HOH . N 4 HOH B 116 416 199 HOH HOH . N 4 HOH B 117 417 211 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 2 -8.153 -30.538 -2.588 1 35.06 ? S SO4 202 A 1 HETATM 2 O O1 SO4 . . . D 2 -6.918 -29.775 -2.754 1 42.28 ? O1 SO4 202 A 1 HETATM 3 O O2 SO4 . . . D 2 -8.774 -30.793 -3.889 1 37.97 ? O2 SO4 202 A 1 HETATM 4 O O3 SO4 . . . D 2 -7.798 -31.795 -1.938 1 28.19 ? O3 SO4 202 A 1 HETATM 5 O O4 SO4 . . . D 2 -9.078 -29.748 -1.766 1 31.79 ? O4 SO4 202 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #