data_7VQU # _model_server_result.job_id SAtEA8Fft-HS4zIxk9_HSw _model_server_result.datetime_utc '2024-12-01 02:36:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7vqu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":906}' # _entry.id 7VQU # _exptl.entry_id 7VQU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 295.256 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-[3,5-bis(fluoranyl)-2-[(2-fluoranylpyridin-3-yl)methoxy]phenyl]propanal _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7VQU _cell.length_a 188.248 _cell.length_b 188.248 _cell.length_c 106.997 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7VQU _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall 'P 61 2 (x,y,z+5/12)' _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id G _struct_conn.ptnr1_label_atom_id C12 _struct_conn.ptnr1_label_comp_id 7UQ _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id 7UQ _struct_conn.ptnr1_auth_seq_id 906 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id H _struct_conn.ptnr2_label_atom_id N5 _struct_conn.ptnr2_label_comp_id FAD _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id FAD _struct_conn.ptnr2_auth_seq_id 907 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.478 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C15 H12 F3 N O2' _chem_comp.formula_weight 295.256 _chem_comp.id 7UQ _chem_comp.mon_nstd_flag . _chem_comp.name 3-[3,5-bis(fluoranyl)-2-[(2-fluoranylpyridin-3-yl)methoxy]phenyl]propanal _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N4 C20 7UQ doub 1 n y N4 C19 7UQ sing 2 n y C20 C21 7UQ sing 3 n y F C19 7UQ sing 4 n n C19 C18 7UQ doub 5 n y C21 C22 7UQ doub 6 n y C18 C22 7UQ sing 7 n y C18 C17 7UQ sing 8 n n C17 O3 7UQ sing 9 n n C12 C15 7UQ sing 10 n n C12 C13 7UQ sing 11 n n O3 C16 7UQ sing 12 n n C15 C16 7UQ doub 13 n y C15 C26 7UQ sing 14 n y C16 C23 7UQ sing 15 n y F1 C23 7UQ sing 16 n n C23 C24 7UQ doub 17 n y C26 C25 7UQ doub 18 n y C13 C14 7UQ sing 19 n n C24 C25 7UQ sing 20 n y C25 F2 7UQ sing 21 n n C14 O2 7UQ doub 22 n n C12 H1 7UQ sing 23 n n C12 H2 7UQ sing 24 n n C13 H3 7UQ sing 25 n n C13 H4 7UQ sing 26 n n C14 H5 7UQ sing 27 n n C17 H6 7UQ sing 28 n n C17 H7 7UQ sing 29 n n C20 H8 7UQ sing 30 n n C21 H9 7UQ sing 31 n n C22 H10 7UQ sing 32 n n C24 H11 7UQ sing 33 n n C26 H12 7UQ sing 34 n n # _atom_sites.entry_id 7VQU _atom_sites.fract_transf_matrix[1][1] 0.005312 _atom_sites.fract_transf_matrix[1][2] 0.003067 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006134 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009346 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 901 901 GOL GOL . C 2 GOL A 1 902 902 GOL GOL . D 2 GOL A 1 903 903 GOL GOL . E 2 GOL A 1 904 904 GOL GOL . F 3 TLA A 1 905 907 TLA TLA . G 4 7UQ A 1 906 1001 7UQ XXX . H 5 FAD A 1 907 1001 FAD XXX . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O3 7UQ . . . G 4 32.804 54.485 -14.531 1 83.96 ? O3 7UQ 906 A 1 HETATM 2 N N4 7UQ . . . G 4 30.258 56.741 -17.335 1 95.59 ? N4 7UQ 906 A 1 HETATM 3 C C12 7UQ . . . G 4 31.408 52.145 -14.758 1 81.79 ? C12 7UQ 906 A 1 HETATM 4 C C13 7UQ . . . G 4 30.487 51.923 -13.561 1 89.08 ? C13 7UQ 906 A 1 HETATM 5 C C14 7UQ . . . G 4 31.077 52.429 -12.29 1 94.02 ? C14 7UQ 906 A 1 HETATM 6 C C15 7UQ . . . G 4 32.8 52.131 -14.161 1 79.51 ? C15 7UQ 906 A 1 HETATM 7 C C16 7UQ . . . G 4 33.49 53.338 -14.201 1 82.94 ? C16 7UQ 906 A 1 HETATM 8 C C17 7UQ . . . G 4 33.218 54.921 -15.829 1 91.72 ? C17 7UQ 906 A 1 HETATM 9 C C18 7UQ . . . G 4 32.344 56.025 -16.353 1 99.01 ? C18 7UQ 906 A 1 HETATM 10 C C19 7UQ . . . G 4 31.074 55.834 -16.86 1 95.39 ? C19 7UQ 906 A 1 HETATM 11 C C20 7UQ . . . G 4 30.713 58.001 -17.308 1 101.99 ? C20 7UQ 906 A 1 HETATM 12 C C21 7UQ . . . G 4 31.958 58.347 -16.837 1 107.95 ? C21 7UQ 906 A 1 HETATM 13 C C22 7UQ . . . G 4 32.782 57.345 -16.357 1 105.47 ? C22 7UQ 906 A 1 HETATM 14 C C23 7UQ . . . G 4 34.831 53.36 -13.88 1 81.83 ? C23 7UQ 906 A 1 HETATM 15 C C24 7UQ . . . G 4 35.51 52.257 -13.458 1 77.02 ? C24 7UQ 906 A 1 HETATM 16 C C25 7UQ . . . G 4 34.786 51.109 -13.337 1 78.18 ? C25 7UQ 906 A 1 HETATM 17 C C26 7UQ . . . G 4 33.458 51 -13.679 1 76.7 ? C26 7UQ 906 A 1 HETATM 18 F F 7UQ . . . G 4 30.58 54.586 -16.838 1 97.04 ? F 7UQ 906 A 1 HETATM 19 F F1 7UQ . . . G 4 35.497 54.52 -14.031 1 86.17 ? F1 7UQ 906 A 1 HETATM 20 F F2 7UQ . . . G 4 35.405 50.04 -12.796 1 93.42 ? F2 7UQ 906 A 1 HETATM 21 O O2 7UQ . . . G 4 31.126 53.564 -11.948 1 96.77 ? O2 7UQ 906 A 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 21 #