data_7VR7 # _model_server_result.job_id nCBrmqfgEwe3hXgEfp8yww _model_server_result.datetime_utc '2025-02-05 12:58:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7vr7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1005}' # _entry.id 7VR7 # _exptl.entry_id 7VR7 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 790.145 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7VR7 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7VR7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details 'complete point assembly' _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'point symmetry operation' ? ? -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 353.48414 94.71584 0 3 'point symmetry operation' ? ? -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 94.71584 353.48415 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 G N N # _chem_comp.formula 'C44 H88 N O8 P' _chem_comp.formula_weight 790.145 _chem_comp.id PC1 _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 3-SN-PHOSPHATIDYLCHOLINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O12 P PC1 sing 451 n n P O14 PC1 doub 452 n n P O13 PC1 sing 453 n n P O11 PC1 sing 454 n n O13 C11 PC1 sing 455 n n C11 C12 PC1 sing 456 n n C11 H111 PC1 sing 457 n n C11 H112 PC1 sing 458 n n C12 N PC1 sing 459 n n C12 H121 PC1 sing 460 n n C12 H122 PC1 sing 461 n n N C13 PC1 sing 462 n n N C14 PC1 sing 463 n n N C15 PC1 sing 464 n n C13 H131 PC1 sing 465 n n C13 H132 PC1 sing 466 n n C13 H133 PC1 sing 467 n n C14 H141 PC1 sing 468 n n C14 H142 PC1 sing 469 n n C14 H143 PC1 sing 470 n n C15 H151 PC1 sing 471 n n C15 H152 PC1 sing 472 n n C15 H153 PC1 sing 473 n n O11 C1 PC1 sing 474 n n C1 C2 PC1 sing 475 n n C1 H11 PC1 sing 476 n n C1 H12 PC1 sing 477 n n C2 O21 PC1 sing 478 n n C2 C3 PC1 sing 479 n n C2 H2 PC1 sing 480 n n O21 C21 PC1 sing 481 n n C21 O22 PC1 doub 482 n n C21 C22 PC1 sing 483 n n C22 C23 PC1 sing 484 n n C22 H221 PC1 sing 485 n n C22 H222 PC1 sing 486 n n C23 C24 PC1 sing 487 n n C23 H231 PC1 sing 488 n n C23 H232 PC1 sing 489 n n C24 C25 PC1 sing 490 n n C24 H241 PC1 sing 491 n n C24 H242 PC1 sing 492 n n C25 C26 PC1 sing 493 n n C25 H251 PC1 sing 494 n n C25 H252 PC1 sing 495 n n C26 C27 PC1 sing 496 n n C26 H261 PC1 sing 497 n n C26 H262 PC1 sing 498 n n C27 C28 PC1 sing 499 n n C27 H271 PC1 sing 500 n n C27 H272 PC1 sing 501 n n C28 C29 PC1 sing 502 n n C28 H281 PC1 sing 503 n n C28 H282 PC1 sing 504 n n C29 C2A PC1 sing 505 n n C29 H291 PC1 sing 506 n n C29 H292 PC1 sing 507 n n C2A C2B PC1 sing 508 n n C2A H2A1 PC1 sing 509 n n C2A H2A2 PC1 sing 510 n n C2B C2C PC1 sing 511 n n C2B H2B1 PC1 sing 512 n n C2B H2B2 PC1 sing 513 n n C2C C2D PC1 sing 514 n n C2C H2C1 PC1 sing 515 n n C2C H2C2 PC1 sing 516 n n C2D C2E PC1 sing 517 n n C2D H2D1 PC1 sing 518 n n C2D H2D2 PC1 sing 519 n n C2E C2F PC1 sing 520 n n C2E H2E1 PC1 sing 521 n n C2E H2E2 PC1 sing 522 n n C2F C2G PC1 sing 523 n n C2F H2F1 PC1 sing 524 n n C2F H2F2 PC1 sing 525 n n C2G C2H PC1 sing 526 n n C2G H2G1 PC1 sing 527 n n C2G H2G2 PC1 sing 528 n n C2H C2I PC1 sing 529 n n C2H H2H1 PC1 sing 530 n n C2H H2H2 PC1 sing 531 n n C2I H2I1 PC1 sing 532 n n C2I H2I2 PC1 sing 533 n n C2I H2I3 PC1 sing 534 n n C3 O31 PC1 sing 535 n n C3 H31 PC1 sing 536 n n C3 H32 PC1 sing 537 n n O31 C31 PC1 sing 538 n n C31 O32 PC1 doub 539 n n C31 C32 PC1 sing 540 n n C32 C33 PC1 sing 541 n n C32 H321 PC1 sing 542 n n C32 H322 PC1 sing 543 n n C33 C34 PC1 sing 544 n n C33 H331 PC1 sing 545 n n C33 H332 PC1 sing 546 n n C34 C35 PC1 sing 547 n n C34 H341 PC1 sing 548 n n C34 H342 PC1 sing 549 n n C35 C36 PC1 sing 550 n n C35 H351 PC1 sing 551 n n C35 H352 PC1 sing 552 n n C36 C37 PC1 sing 553 n n C36 H361 PC1 sing 554 n n C36 H362 PC1 sing 555 n n C37 C38 PC1 sing 556 n n C37 H371 PC1 sing 557 n n C37 H372 PC1 sing 558 n n C38 C39 PC1 sing 559 n n C38 H381 PC1 sing 560 n n C38 H382 PC1 sing 561 n n C39 C3A PC1 sing 562 n n C39 H391 PC1 sing 563 n n C39 H392 PC1 sing 564 n n C3A C3B PC1 sing 565 n n C3A H3A1 PC1 sing 566 n n C3A H3A2 PC1 sing 567 n n C3B C3C PC1 sing 568 n n C3B H3B1 PC1 sing 569 n n C3B H3B2 PC1 sing 570 n n C3C C3D PC1 sing 571 n n C3C H3C1 PC1 sing 572 n n C3C H3C2 PC1 sing 573 n n C3D C3E PC1 sing 574 n n C3D H3D1 PC1 sing 575 n n C3D H3D2 PC1 sing 576 n n C3E C3F PC1 sing 577 n n C3E H3E1 PC1 sing 578 n n C3E H3E2 PC1 sing 579 n n C3F C3G PC1 sing 580 n n C3F H3F1 PC1 sing 581 n n C3F H3F2 PC1 sing 582 n n C3G C3H PC1 sing 583 n n C3G H3G1 PC1 sing 584 n n C3G H3G2 PC1 sing 585 n n C3H C3I PC1 sing 586 n n C3H H3H1 PC1 sing 587 n n C3H H3H2 PC1 sing 588 n n C3I H3I1 PC1 sing 589 n n C3I H3I2 PC1 sing 590 n n C3I H3I3 PC1 sing 591 n n # _atom_sites.entry_id 7VR7 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GJ0 A 1 1001 1001 GJ0 LIG . C 3 9Z9 A 1 1002 1101 9Z9 9Z9 . D 4 CLR A 1 1003 1201 CLR CLR . E 4 CLR A 1 1004 1202 CLR CLR . F 5 PC1 A 1 1005 1203 PC1 PC1 . G 5 PC1 A 1 1006 1204 PC1 PC1 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O31 PC1 . . . F 5 122.17 165.845 154.692 1 118.14 ? O31 PC1 1005 A 1 HETATM 2 C C31 PC1 . . . F 5 121.28 166.217 153.773 1 118.75 ? C31 PC1 1005 A 1 HETATM 3 O O32 PC1 . . . F 5 120.229 166.732 154.046 1 119.78 ? O32 PC1 1005 A 1 HETATM 4 C C32 PC1 . . . F 5 121.691 165.91 152.346 1 114.42 ? C32 PC1 1005 A 1 HETATM 5 C C33 PC1 . . . F 5 122.884 166.703 151.839 1 112.63 ? C33 PC1 1005 A 1 HETATM 6 C C34 PC1 . . . F 5 123.553 166.109 150.586 1 111.99 ? C34 PC1 1005 A 1 HETATM 7 C C35 PC1 . . . F 5 123.706 167.064 149.422 1 112 ? C35 PC1 1005 A 1 HETATM 8 C C36 PC1 . . . F 5 124.605 166.539 148.316 1 112.04 ? C36 PC1 1005 A 1 HETATM 9 C C37 PC1 . . . F 5 124.829 167.506 147.173 1 113.25 ? C37 PC1 1005 A 1 HETATM 10 C C38 PC1 . . . F 5 125.696 166.964 146.028 1 113.73 ? C38 PC1 1005 A 1 HETATM 11 C C39 PC1 . . . F 5 126.429 168.026 145.222 1 117.83 ? C39 PC1 1005 A 1 HETATM 12 C C3A PC1 . . . F 5 127.047 167.539 143.916 1 120.12 ? C3A PC1 1005 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 12 #