data_7VR8 # _model_server_result.job_id 8mAASsXtMQEqO9vAeOZvrA _model_server_result.datetime_utc '2024-11-04 23:13:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7vr8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1101}' # _entry.id 7VR8 # _exptl.entry_id 7VR8 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 544.805 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7VR8 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7VR8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details 'complete point assembly' _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'point symmetry operation' ? ? -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 353.48415 94.71584 0 3 'point symmetry operation' ? ? -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 94.71584 353.48415 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C34 H56 O5' _chem_comp.formula_weight 544.805 _chem_comp.id 9Z9 _chem_comp.mon_nstd_flag . _chem_comp.name (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O25 C26 9Z9 sing 1 n n O25 C24 9Z9 sing 2 n n C50 O49 9Z9 sing 3 n n O49 C48 9Z9 sing 4 n n C24 C23 9Z9 sing 5 n n C48 C23 9Z9 sing 6 n n C23 C22 9Z9 sing 7 n n C22 C21 9Z9 sing 8 n n C21 O20 9Z9 sing 9 n n O20 C17 9Z9 sing 10 n n C17 C18 9Z9 sing 11 n n C17 C16 9Z9 sing 12 n n C18 C19 9Z9 sing 13 n n C16 C13 9Z9 sing 14 n n C19 C11 9Z9 sing 15 n n C13 C11 9Z9 sing 16 n n C13 C14 9Z9 doub 17 n n C11 C12 9Z9 sing 18 n n C11 C08 9Z9 sing 19 n n C14 C15 9Z9 sing 20 n n C08 C09 9Z9 sing 21 n n C08 C07 9Z9 sing 22 n n C15 C07 9Z9 sing 23 n n C09 C10 9Z9 sing 24 n n C07 C06 9Z9 sing 25 n n C10 C02 9Z9 sing 26 n n C06 C02 9Z9 sing 27 n n C06 C05 9Z9 sing 28 n n C02 C01 9Z9 sing 29 n n C02 C03 9Z9 sing 30 n n C05 C04 9Z9 sing 31 n n C03 C04 9Z9 sing 32 n n C03 C74 9Z9 sing 33 n n C04 O72 9Z9 sing 34 n n C74 C75 9Z9 sing 35 n n C74 C73 9Z9 sing 36 n n O72 C73 9Z9 sing 37 n n C73 O80 9Z9 sing 38 n n C73 C76 9Z9 sing 39 n n O80 C79 9Z9 sing 40 n n C76 C77 9Z9 sing 41 n n C79 C78 9Z9 sing 42 n n C77 C78 9Z9 sing 43 n n C78 C81 9Z9 sing 44 n n C01 H1 9Z9 sing 45 n n C01 H2 9Z9 sing 46 n n C01 H3 9Z9 sing 47 n n C03 H4 9Z9 sing 48 n n C04 H5 9Z9 sing 49 n n C05 H6 9Z9 sing 50 n n C05 H7 9Z9 sing 51 n n C06 H8 9Z9 sing 52 n n C07 H9 9Z9 sing 53 n n C08 H10 9Z9 sing 54 n n C09 H11 9Z9 sing 55 n n C09 H12 9Z9 sing 56 n n C10 H13 9Z9 sing 57 n n C10 H14 9Z9 sing 58 n n C12 H15 9Z9 sing 59 n n C12 H16 9Z9 sing 60 n n C12 H17 9Z9 sing 61 n n C14 H18 9Z9 sing 62 n n C15 H19 9Z9 sing 63 n n C15 H20 9Z9 sing 64 n n C16 H21 9Z9 sing 65 n n C16 H22 9Z9 sing 66 n n C17 H23 9Z9 sing 67 n n C18 H24 9Z9 sing 68 n n C18 H25 9Z9 sing 69 n n C19 H26 9Z9 sing 70 n n C19 H27 9Z9 sing 71 n n C21 H28 9Z9 sing 72 n n C21 H29 9Z9 sing 73 n n C22 H30 9Z9 sing 74 n n C22 H31 9Z9 sing 75 n n C23 H32 9Z9 sing 76 n n C24 H33 9Z9 sing 77 n n C24 H34 9Z9 sing 78 n n C26 H35 9Z9 sing 79 n n C26 H36 9Z9 sing 80 n n C26 H37 9Z9 sing 81 n n C48 H38 9Z9 sing 82 n n C48 H39 9Z9 sing 83 n n C50 H40 9Z9 sing 84 n n C50 H41 9Z9 sing 85 n n C50 H42 9Z9 sing 86 n n C74 H43 9Z9 sing 87 n n C75 H44 9Z9 sing 88 n n C75 H45 9Z9 sing 89 n n C75 H46 9Z9 sing 90 n n C76 H47 9Z9 sing 91 n n C76 H48 9Z9 sing 92 n n C77 H49 9Z9 sing 93 n n C77 H50 9Z9 sing 94 n n C78 H51 9Z9 sing 95 n n C79 H52 9Z9 sing 96 n n C79 H53 9Z9 sing 97 n n C81 H54 9Z9 sing 98 n n C81 H55 9Z9 sing 99 n n C81 H56 9Z9 sing 100 n n # _atom_sites.entry_id 7VR8 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 9Z9 A 1 1101 1101 9Z9 9Z9 . C 3 CLR A 1 1102 1201 CLR CLR . D 4 PC1 A 1 1103 1203 PC1 PC1 . E 4 PC1 A 1 1104 1204 PC1 PC1 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 9Z9 . . . B 2 132.554 161.386 151.987 1 112.48 ? C01 9Z9 1101 A 1 HETATM 2 C C02 9Z9 . . . B 2 133.554 160.412 151.363 1 99.11 ? C02 9Z9 1101 A 1 HETATM 3 C C03 9Z9 . . . B 2 133.842 159.186 152.288 1 108.53 ? C03 9Z9 1101 A 1 HETATM 4 C C04 9Z9 . . . B 2 132.768 158.128 151.906 1 100.48 ? C04 9Z9 1101 A 1 HETATM 5 C C05 9Z9 . . . B 2 132.004 158.694 150.702 1 99.6 ? C05 9Z9 1101 A 1 HETATM 6 C C06 9Z9 . . . B 2 133.001 159.701 150.12 1 91.09 ? C06 9Z9 1101 A 1 HETATM 7 C C07 9Z9 . . . B 2 132.544 160.663 149.011 1 121.38 ? C07 9Z9 1101 A 1 HETATM 8 C C08 9Z9 . . . B 2 133.687 161.645 148.646 1 145.11 ? C08 9Z9 1101 A 1 HETATM 9 C C09 9Z9 . . . B 2 134.409 162.249 149.88 1 125.83 ? C09 9Z9 1101 A 1 HETATM 10 C C10 9Z9 . . . B 2 134.772 161.188 150.926 1 109.66 ? C10 9Z9 1101 A 1 HETATM 11 C C11 9Z9 . . . B 2 133.304 162.678 147.531 1 150.07 ? C11 9Z9 1101 A 1 HETATM 12 C C12 9Z9 . . . B 2 132.488 163.851 148.1 1 153.4 ? C12 9Z9 1101 A 1 HETATM 13 C C13 9Z9 . . . B 2 132.457 162.004 146.454 1 136.44 ? C13 9Z9 1101 A 1 HETATM 14 C C14 9Z9 . . . B 2 131.964 160.767 146.571 1 135.86 ? C14 9Z9 1101 A 1 HETATM 15 C C15 9Z9 . . . B 2 132.135 159.878 147.767 1 142.13 ? C15 9Z9 1101 A 1 HETATM 16 C C16 9Z9 . . . B 2 132.18 162.821 145.227 1 146.76 ? C16 9Z9 1101 A 1 HETATM 17 C C17 9Z9 . . . B 2 133.47 163.273 144.539 1 165.43 ? C17 9Z9 1101 A 1 HETATM 18 C C18 9Z9 . . . B 2 134.406 163.959 145.522 1 159.51 ? C18 9Z9 1101 A 1 HETATM 19 C C19 9Z9 . . . B 2 134.597 163.207 146.852 1 156.07 ? C19 9Z9 1101 A 1 HETATM 20 O O20 9Z9 . . . B 2 133.214 164.166 143.439 1 193.59 ? O20 9Z9 1101 A 1 HETATM 21 C C21 9Z9 . . . B 2 132.014 163.91 142.698 1 232.29 ? C21 9Z9 1101 A 1 HETATM 22 C C22 9Z9 . . . B 2 131.837 164.795 141.493 1 265.93 ? C22 9Z9 1101 A 1 HETATM 23 C C23 9Z9 . . . B 2 130.464 164.662 140.805 1 309.48 ? C23 9Z9 1101 A 1 HETATM 24 C C24 9Z9 . . . B 2 130.507 165.459 139.517 1 321.84 ? C24 9Z9 1101 A 1 HETATM 25 O O25 9Z9 . . . B 2 129.196 165.533 138.993 1 336.67 ? O25 9Z9 1101 A 1 HETATM 26 C C26 9Z9 . . . B 2 129.071 166.182 137.747 1 325.53 ? C26 9Z9 1101 A 1 HETATM 27 C C48 9Z9 . . . B 2 130.121 163.213 140.498 1 329.24 ? C48 9Z9 1101 A 1 HETATM 28 O O49 9Z9 . . . B 2 129.432 162.677 141.612 1 343 ? O49 9Z9 1101 A 1 HETATM 29 C C50 9Z9 . . . B 2 129.141 161.295 141.52 1 345.71 ? C50 9Z9 1101 A 1 HETATM 30 O O72 9Z9 . . . B 2 132.018 157.906 153.126 1 83.03 ? O72 9Z9 1101 A 1 HETATM 31 C C73 9Z9 . . . B 2 132.931 158.066 154.21 1 95.91 ? C73 9Z9 1101 A 1 HETATM 32 C C74 9Z9 . . . B 2 133.711 159.321 153.822 1 103.75 ? C74 9Z9 1101 A 1 HETATM 33 C C75 9Z9 . . . B 2 135.021 159.58 154.554 1 105.23 ? C75 9Z9 1101 A 1 HETATM 34 C C76 9Z9 . . . B 2 132.167 158.143 155.517 1 88.88 ? C76 9Z9 1101 A 1 HETATM 35 C C77 9Z9 . . . B 2 131.504 156.801 155.839 1 106.3 ? C77 9Z9 1101 A 1 HETATM 36 C C78 9Z9 . . . B 2 132.483 155.628 155.803 1 107.54 ? C78 9Z9 1101 A 1 HETATM 37 C C79 9Z9 . . . B 2 133.281 155.68 154.506 1 99.12 ? C79 9Z9 1101 A 1 HETATM 38 O O80 9Z9 . . . B 2 133.852 156.973 154.243 1 105.04 ? O80 9Z9 1101 A 1 HETATM 39 C C81 9Z9 . . . B 2 131.768 154.289 156.002 1 135.62 ? C81 9Z9 1101 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 39 #