data_7VRM # _model_server_result.job_id S0JynTqGF8lVOGiiIzXDig _model_server_result.datetime_utc '2024-11-08 20:34:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7vrm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 7VRM # _exptl.entry_id 7VRM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.164 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description THEOPHYLLINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7VRM _cell.length_a 52.515 _cell.length_b 71.823 _cell.length_c 32.145 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7VRM _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C7 H8 N4 O2' _chem_comp.formula_weight 180.164 _chem_comp.id TEP _chem_comp.mon_nstd_flag . _chem_comp.name THEOPHYLLINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 N1 TEP sing 290 n n C1 H11 TEP sing 291 n n C1 H12 TEP sing 292 n n C1 H13 TEP sing 293 n n N1 C2 TEP sing 294 n y N1 C6 TEP sing 295 n y C2 O2 TEP doub 296 n n C2 N3 TEP sing 297 n y N3 C3 TEP sing 298 n n N3 C4 TEP sing 299 n y C3 H31 TEP sing 300 n n C3 H32 TEP sing 301 n n C3 H33 TEP sing 302 n n C4 C5 TEP doub 303 n y C4 N9 TEP sing 304 n y C5 C6 TEP sing 305 n y C5 N7 TEP sing 306 n y C6 O6 TEP doub 307 n n N7 C8 TEP sing 308 n y N7 HN7 TEP sing 309 n n C8 N9 TEP doub 310 n y C8 H8 TEP sing 311 n n # _atom_sites.entry_id 7VRM _atom_sites.fract_transf_matrix[1][1] 0.019042 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013923 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.031109 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TEP A 1 501 501 TEP TEP . C 2 TEP A 1 502 601 TEP TEP . D 3 HOH A 1 601 109 HOH HOH . D 3 HOH A 2 602 111 HOH HOH . D 3 HOH A 3 603 126 HOH HOH . D 3 HOH A 4 604 154 HOH HOH . D 3 HOH A 5 605 80 HOH HOH . D 3 HOH A 6 606 201 HOH HOH . D 3 HOH A 7 607 186 HOH HOH . D 3 HOH A 8 608 129 HOH HOH . D 3 HOH A 9 609 171 HOH HOH . D 3 HOH A 10 610 85 HOH HOH . D 3 HOH A 11 611 113 HOH HOH . D 3 HOH A 12 612 198 HOH HOH . D 3 HOH A 13 613 26 HOH HOH . D 3 HOH A 14 614 79 HOH HOH . D 3 HOH A 15 615 197 HOH HOH . D 3 HOH A 16 616 88 HOH HOH . D 3 HOH A 17 617 107 HOH HOH . D 3 HOH A 18 618 213 HOH HOH . D 3 HOH A 19 619 102 HOH HOH . D 3 HOH A 20 620 101 HOH HOH . D 3 HOH A 21 621 14 HOH HOH . D 3 HOH A 22 622 145 HOH HOH . D 3 HOH A 23 623 151 HOH HOH . D 3 HOH A 24 624 44 HOH HOH . D 3 HOH A 25 625 24 HOH HOH . D 3 HOH A 26 626 165 HOH HOH . D 3 HOH A 27 627 221 HOH HOH . D 3 HOH A 28 628 161 HOH HOH . D 3 HOH A 29 629 156 HOH HOH . D 3 HOH A 30 630 12 HOH HOH . D 3 HOH A 31 631 175 HOH HOH . D 3 HOH A 32 632 93 HOH HOH . D 3 HOH A 33 633 34 HOH HOH . D 3 HOH A 34 634 47 HOH HOH . D 3 HOH A 35 635 2 HOH HOH . D 3 HOH A 36 636 160 HOH HOH . D 3 HOH A 37 637 46 HOH HOH . D 3 HOH A 38 638 16 HOH HOH . D 3 HOH A 39 639 40 HOH HOH . D 3 HOH A 40 640 94 HOH HOH . D 3 HOH A 41 641 32 HOH HOH . D 3 HOH A 42 642 52 HOH HOH . D 3 HOH A 43 643 13 HOH HOH . D 3 HOH A 44 644 95 HOH HOH . D 3 HOH A 45 645 10 HOH HOH . D 3 HOH A 46 646 123 HOH HOH . D 3 HOH A 47 647 138 HOH HOH . D 3 HOH A 48 648 71 HOH HOH . D 3 HOH A 49 649 168 HOH HOH . D 3 HOH A 50 650 35 HOH HOH . D 3 HOH A 51 651 18 HOH HOH . D 3 HOH A 52 652 25 HOH HOH . D 3 HOH A 53 653 42 HOH HOH . D 3 HOH A 54 654 114 HOH HOH . D 3 HOH A 55 655 28 HOH HOH . D 3 HOH A 56 656 203 HOH HOH . D 3 HOH A 57 657 89 HOH HOH . D 3 HOH A 58 658 76 HOH HOH . D 3 HOH A 59 659 36 HOH HOH . D 3 HOH A 60 660 11 HOH HOH . D 3 HOH A 61 661 139 HOH HOH . D 3 HOH A 62 662 122 HOH HOH . D 3 HOH A 63 663 55 HOH HOH . D 3 HOH A 64 664 59 HOH HOH . D 3 HOH A 65 665 63 HOH HOH . D 3 HOH A 66 666 39 HOH HOH . D 3 HOH A 67 667 128 HOH HOH . D 3 HOH A 68 668 7 HOH HOH . D 3 HOH A 69 669 5 HOH HOH . D 3 HOH A 70 670 87 HOH HOH . D 3 HOH A 71 671 176 HOH HOH . D 3 HOH A 72 672 177 HOH HOH . D 3 HOH A 73 673 15 HOH HOH . D 3 HOH A 74 674 118 HOH HOH . D 3 HOH A 75 675 99 HOH HOH . D 3 HOH A 76 676 92 HOH HOH . D 3 HOH A 77 677 140 HOH HOH . D 3 HOH A 78 678 50 HOH HOH . D 3 HOH A 79 679 8 HOH HOH . D 3 HOH A 80 680 96 HOH HOH . D 3 HOH A 81 681 117 HOH HOH . D 3 HOH A 82 682 136 HOH HOH . D 3 HOH A 83 683 166 HOH HOH . D 3 HOH A 84 684 3 HOH HOH . D 3 HOH A 85 685 144 HOH HOH . D 3 HOH A 86 686 98 HOH HOH . D 3 HOH A 87 687 64 HOH HOH . D 3 HOH A 88 688 31 HOH HOH . D 3 HOH A 89 689 105 HOH HOH . D 3 HOH A 90 690 103 HOH HOH . D 3 HOH A 91 691 141 HOH HOH . D 3 HOH A 92 692 194 HOH HOH . D 3 HOH A 93 693 21 HOH HOH . D 3 HOH A 94 694 30 HOH HOH . D 3 HOH A 95 695 45 HOH HOH . D 3 HOH A 96 696 143 HOH HOH . D 3 HOH A 97 697 74 HOH HOH . D 3 HOH A 98 698 19 HOH HOH . D 3 HOH A 99 699 62 HOH HOH . D 3 HOH A 100 700 195 HOH HOH . D 3 HOH A 101 701 17 HOH HOH . D 3 HOH A 102 702 9 HOH HOH . D 3 HOH A 103 703 106 HOH HOH . D 3 HOH A 104 704 217 HOH HOH . D 3 HOH A 105 705 78 HOH HOH . D 3 HOH A 106 706 86 HOH HOH . D 3 HOH A 107 707 110 HOH HOH . D 3 HOH A 108 708 1 HOH HOH . D 3 HOH A 109 709 204 HOH HOH . D 3 HOH A 110 710 6 HOH HOH . D 3 HOH A 111 711 37 HOH HOH . D 3 HOH A 112 712 205 HOH HOH . D 3 HOH A 113 713 162 HOH HOH . D 3 HOH A 114 714 66 HOH HOH . D 3 HOH A 115 715 206 HOH HOH . D 3 HOH A 116 716 60 HOH HOH . D 3 HOH A 117 717 4 HOH HOH . D 3 HOH A 118 718 38 HOH HOH . D 3 HOH A 119 719 33 HOH HOH . D 3 HOH A 120 720 120 HOH HOH . D 3 HOH A 121 721 150 HOH HOH . D 3 HOH A 122 722 49 HOH HOH . D 3 HOH A 123 723 214 HOH HOH . D 3 HOH A 124 724 189 HOH HOH . D 3 HOH A 125 725 108 HOH HOH . D 3 HOH A 126 726 119 HOH HOH . D 3 HOH A 127 727 219 HOH HOH . D 3 HOH A 128 728 210 HOH HOH . D 3 HOH A 129 729 22 HOH HOH . D 3 HOH A 130 730 223 HOH HOH . D 3 HOH A 131 731 170 HOH HOH . D 3 HOH A 132 732 152 HOH HOH . D 3 HOH A 133 733 174 HOH HOH . D 3 HOH A 134 734 212 HOH HOH . D 3 HOH A 135 735 208 HOH HOH . D 3 HOH A 136 736 183 HOH HOH . D 3 HOH A 137 737 27 HOH HOH . D 3 HOH A 138 738 134 HOH HOH . D 3 HOH A 139 739 191 HOH HOH . D 3 HOH A 140 740 132 HOH HOH . D 3 HOH A 141 741 147 HOH HOH . D 3 HOH A 142 742 23 HOH HOH . D 3 HOH A 143 743 148 HOH HOH . D 3 HOH A 144 744 172 HOH HOH . D 3 HOH A 145 745 179 HOH HOH . D 3 HOH A 146 746 48 HOH HOH . D 3 HOH A 147 747 127 HOH HOH . D 3 HOH A 148 748 164 HOH HOH . D 3 HOH A 149 749 202 HOH HOH . D 3 HOH A 150 750 225 HOH HOH . D 3 HOH A 151 751 158 HOH HOH . D 3 HOH A 152 752 104 HOH HOH . D 3 HOH A 153 753 196 HOH HOH . D 3 HOH A 154 754 58 HOH HOH . D 3 HOH A 155 755 83 HOH HOH . D 3 HOH A 156 756 67 HOH HOH . D 3 HOH A 157 757 159 HOH HOH . D 3 HOH A 158 758 41 HOH HOH . D 3 HOH A 159 759 112 HOH HOH . D 3 HOH A 160 760 69 HOH HOH . D 3 HOH A 161 761 207 HOH HOH . D 3 HOH A 162 762 222 HOH HOH . D 3 HOH A 163 763 199 HOH HOH . D 3 HOH A 164 764 82 HOH HOH . D 3 HOH A 165 765 54 HOH HOH . D 3 HOH A 166 766 72 HOH HOH . D 3 HOH A 167 767 192 HOH HOH . D 3 HOH A 168 768 90 HOH HOH . D 3 HOH A 169 769 124 HOH HOH . D 3 HOH A 170 770 53 HOH HOH . D 3 HOH A 171 771 73 HOH HOH . D 3 HOH A 172 772 51 HOH HOH . D 3 HOH A 173 773 187 HOH HOH . D 3 HOH A 174 774 133 HOH HOH . D 3 HOH A 175 775 70 HOH HOH . D 3 HOH A 176 776 61 HOH HOH . D 3 HOH A 177 777 185 HOH HOH . D 3 HOH A 178 778 224 HOH HOH . D 3 HOH A 179 779 135 HOH HOH . D 3 HOH A 180 780 190 HOH HOH . D 3 HOH A 181 781 91 HOH HOH . D 3 HOH A 182 782 142 HOH HOH . D 3 HOH A 183 783 178 HOH HOH . D 3 HOH A 184 784 215 HOH HOH . D 3 HOH A 185 785 200 HOH HOH . D 3 HOH A 186 786 84 HOH HOH . D 3 HOH A 187 787 57 HOH HOH . D 3 HOH A 188 788 173 HOH HOH . D 3 HOH A 189 789 218 HOH HOH . D 3 HOH A 190 790 149 HOH HOH . D 3 HOH A 191 791 68 HOH HOH . D 3 HOH A 192 792 43 HOH HOH . D 3 HOH A 193 793 97 HOH HOH . D 3 HOH A 194 794 81 HOH HOH . D 3 HOH A 195 795 184 HOH HOH . D 3 HOH A 196 796 167 HOH HOH . D 3 HOH A 197 797 20 HOH HOH . D 3 HOH A 198 798 137 HOH HOH . D 3 HOH A 199 799 193 HOH HOH . D 3 HOH A 200 800 163 HOH HOH . D 3 HOH A 201 801 146 HOH HOH . D 3 HOH A 202 802 100 HOH HOH . D 3 HOH A 203 803 153 HOH HOH . D 3 HOH A 204 804 180 HOH HOH . D 3 HOH A 205 805 65 HOH HOH . D 3 HOH A 206 806 116 HOH HOH . D 3 HOH A 207 807 188 HOH HOH . D 3 HOH A 208 808 75 HOH HOH . D 3 HOH A 209 809 216 HOH HOH . D 3 HOH A 210 810 115 HOH HOH . D 3 HOH A 211 811 169 HOH HOH . D 3 HOH A 212 812 29 HOH HOH . D 3 HOH A 213 813 56 HOH HOH . D 3 HOH A 214 814 209 HOH HOH . D 3 HOH A 215 815 130 HOH HOH . D 3 HOH A 216 816 131 HOH HOH . D 3 HOH A 217 817 121 HOH HOH . D 3 HOH A 218 818 125 HOH HOH . D 3 HOH A 219 819 77 HOH HOH . D 3 HOH A 220 820 211 HOH HOH . D 3 HOH A 221 821 155 HOH HOH . D 3 HOH A 222 822 181 HOH HOH . D 3 HOH A 223 823 157 HOH HOH . D 3 HOH A 224 824 182 HOH HOH . D 3 HOH A 225 825 220 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 TEP . . . B 2 15.425 -3.908 5.619 1 12.26 ? C1 TEP 501 A 1 HETATM 2 N N1 TEP . . . B 2 16.167 -4.775 6.537 1 11.28 ? N1 TEP 501 A 1 HETATM 3 C C2 TEP . . . B 2 17.348 -4.264 7.069 1 12.43 ? C2 TEP 501 A 1 HETATM 4 O O2 TEP . . . B 2 17.757 -3.16 6.761 1 14.24 ? O2 TEP 501 A 1 HETATM 5 N N3 TEP . . . B 2 18.026 -5.052 7.983 1 12.97 ? N3 TEP 501 A 1 HETATM 6 C C3 TEP . . . B 2 19.235 -4.514 8.611 1 14.28 ? C3 TEP 501 A 1 HETATM 7 C C4 TEP . . . B 2 17.53 -6.288 8.315 1 12.49 ? C4 TEP 501 A 1 HETATM 8 C C5 TEP . . . B 2 16.374 -6.762 7.77 1 10.61 ? C5 TEP 501 A 1 HETATM 9 C C6 TEP . . . B 2 15.605 -6.029 6.828 1 10.37 ? C6 TEP 501 A 1 HETATM 10 O O6 TEP . . . B 2 14.553 -6.381 6.304 1 10.33 ? O6 TEP 501 A 1 HETATM 11 N N7 TEP . . . B 2 16.181 -7.995 8.346 1 11.35 ? N7 TEP 501 A 1 HETATM 12 C C8 TEP . . . B 2 17.214 -8.187 9.185 1 11.98 ? C8 TEP 501 A 1 HETATM 13 N N9 TEP . . . B 2 18.068 -7.171 9.199 1 12.47 ? N9 TEP 501 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #