data_7VRS
#
_model_server_result.job_id            jd5vYG5rjYYvCM87xKEh5A 
_model_server_result.datetime_utc      '2024-10-10 06:29:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7vrs 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":501}' 
#
_entry.id    7VRS 
#
_exptl.entry_id    7VRS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              248.235 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "1,1'-butane-1,4-diylbis(1H-pyrrole-2,5-dione)" 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7VRS 
_cell.length_a            75.613 
_cell.length_b            102.061 
_cell.length_c            150.991 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7VRS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        17 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 2 2 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 212 A CYS 190 1_555 D CAG ME9 . A ME9 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.984 ? 
covale ? covale2 D CAE ME9 . A ME9 501 1_555 F S44 PNS . C PNS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.736 ? 
covale ? covale3 B SG CYS 212 B CYS 190 1_555 E CAH ME9 . B ME9 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.651 ? 
covale ? covale4 C OG SER 66 C SER 47 1_555 F P24 PNS . C PNS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.52 ? 
#
_chem_comp.formula           'C12 H12 N2 O4' 
_chem_comp.formula_weight    248.235 
_chem_comp.id                ME9 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "1,1'-butane-1,4-diylbis(1H-pyrrole-2,5-dione)" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
OAA CAM ME9 doub 218 n n 
OAB CAN ME9 doub 219 n n 
CAO OAC ME9 doub 220 n n 
OAD CAP ME9 doub 221 n n 
CAM CAE ME9 sing 222 n n 
CAF CAE ME9 doub 223 n n 
CAE HAE ME9 sing 224 n n 
CAN CAF ME9 sing 225 n n 
CAF HAF ME9 sing 226 n n 
CAH CAG ME9 doub 227 n n 
CAO CAG ME9 sing 228 n n 
CAG HAG ME9 sing 229 n n 
CAP CAH ME9 sing 230 n n 
CAH HAH ME9 sing 231 n n 
CAJ CAI ME9 sing 232 n n 
CAI CAK ME9 sing 233 n n 
CAI HAI ME9 sing 234 n n 
CAI HAIA ME9 sing 235 n n 
CAJ CAL ME9 sing 236 n n 
CAJ HAJ ME9 sing 237 n n 
CAJ HAJA ME9 sing 238 n n 
CAK NAQ ME9 sing 239 n n 
CAK HAK ME9 sing 240 n n 
CAK HAKA ME9 sing 241 n n 
CAL NAR ME9 sing 242 n n 
CAL HAL ME9 sing 243 n n 
CAL HALA ME9 sing 244 n n 
NAQ CAM ME9 sing 245 n n 
NAQ CAN ME9 sing 246 n n 
NAR CAO ME9 sing 247 n n 
CAP NAR ME9 sing 248 n n 
#
_atom_sites.entry_id                     7VRS 
_atom_sites.fract_transf_matrix[1][1]    0.013225 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009798 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006623 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 3 ME9 A 1 501 505 ME9 ME9 . 
E 3 ME9 B 1 501 501 ME9 ME9 . 
F 4 PNS C 1 101 504 PNS PNS . 
G 5 HOH A 1 601 11 HOH HOH . 
G 5 HOH A 2 602 92 HOH HOH . 
G 5 HOH A 3 603 99 HOH HOH . 
G 5 HOH A 4 604 71 HOH HOH . 
G 5 HOH A 5 605 52 HOH HOH . 
G 5 HOH A 6 606 28 HOH HOH . 
G 5 HOH A 7 607 7 HOH HOH . 
G 5 HOH A 8 608 68 HOH HOH . 
G 5 HOH A 9 609 96 HOH HOH . 
G 5 HOH A 10 610 18 HOH HOH . 
G 5 HOH A 11 611 87 HOH HOH . 
G 5 HOH A 12 612 40 HOH HOH . 
G 5 HOH A 13 613 100 HOH HOH . 
G 5 HOH A 14 614 102 HOH HOH . 
G 5 HOH A 15 615 85 HOH HOH . 
G 5 HOH A 16 616 59 HOH HOH . 
G 5 HOH A 17 617 77 HOH HOH . 
G 5 HOH A 18 618 30 HOH HOH . 
G 5 HOH A 19 619 88 HOH HOH . 
G 5 HOH A 20 620 110 HOH HOH . 
G 5 HOH A 21 621 17 HOH HOH . 
G 5 HOH A 22 622 25 HOH HOH . 
G 5 HOH A 23 623 81 HOH HOH . 
G 5 HOH A 24 624 23 HOH HOH . 
G 5 HOH A 25 625 50 HOH HOH . 
G 5 HOH A 26 626 31 HOH HOH . 
G 5 HOH A 27 627 93 HOH HOH . 
G 5 HOH A 28 628 108 HOH HOH . 
G 5 HOH A 29 629 24 HOH HOH . 
G 5 HOH A 30 630 14 HOH HOH . 
G 5 HOH A 31 631 3 HOH HOH . 
G 5 HOH A 32 632 116 HOH HOH . 
G 5 HOH A 33 633 4 HOH HOH . 
G 5 HOH A 34 634 82 HOH HOH . 
G 5 HOH A 35 635 49 HOH HOH . 
G 5 HOH A 36 636 115 HOH HOH . 
G 5 HOH A 37 637 19 HOH HOH . 
G 5 HOH A 38 638 22 HOH HOH . 
G 5 HOH A 39 639 5 HOH HOH . 
G 5 HOH A 40 640 74 HOH HOH . 
G 5 HOH A 41 641 9 HOH HOH . 
G 5 HOH A 42 642 46 HOH HOH . 
G 5 HOH A 43 643 39 HOH HOH . 
G 5 HOH A 44 644 119 HOH HOH . 
G 5 HOH A 45 645 37 HOH HOH . 
G 5 HOH A 46 646 61 HOH HOH . 
G 5 HOH A 47 647 98 HOH HOH . 
G 5 HOH A 48 648 62 HOH HOH . 
G 5 HOH A 49 649 38 HOH HOH . 
G 5 HOH A 50 650 2 HOH HOH . 
G 5 HOH A 51 651 122 HOH HOH . 
G 5 HOH A 52 652 36 HOH HOH . 
G 5 HOH A 53 653 65 HOH HOH . 
G 5 HOH A 54 654 66 HOH HOH . 
G 5 HOH A 55 655 16 HOH HOH . 
G 5 HOH A 56 656 32 HOH HOH . 
G 5 HOH A 57 657 72 HOH HOH . 
G 5 HOH A 58 658 27 HOH HOH . 
G 5 HOH A 59 659 121 HOH HOH . 
G 5 HOH A 60 660 1 HOH HOH . 
G 5 HOH A 61 661 97 HOH HOH . 
G 5 HOH A 62 662 114 HOH HOH . 
G 5 HOH A 63 663 91 HOH HOH . 
G 5 HOH A 64 664 123 HOH HOH . 
G 5 HOH A 65 665 53 HOH HOH . 
G 5 HOH A 66 666 54 HOH HOH . 
G 5 HOH A 67 667 117 HOH HOH . 
G 5 HOH A 68 668 44 HOH HOH . 
H 5 HOH B 1 601 43 HOH HOH . 
H 5 HOH B 2 602 95 HOH HOH . 
H 5 HOH B 3 603 89 HOH HOH . 
H 5 HOH B 4 604 57 HOH HOH . 
H 5 HOH B 5 605 56 HOH HOH . 
H 5 HOH B 6 606 73 HOH HOH . 
H 5 HOH B 7 607 79 HOH HOH . 
H 5 HOH B 8 608 6 HOH HOH . 
H 5 HOH B 9 609 48 HOH HOH . 
H 5 HOH B 10 610 70 HOH HOH . 
H 5 HOH B 11 611 101 HOH HOH . 
H 5 HOH B 12 612 103 HOH HOH . 
H 5 HOH B 13 613 76 HOH HOH . 
H 5 HOH B 14 614 21 HOH HOH . 
H 5 HOH B 15 615 51 HOH HOH . 
H 5 HOH B 16 616 63 HOH HOH . 
H 5 HOH B 17 617 107 HOH HOH . 
H 5 HOH B 18 618 106 HOH HOH . 
H 5 HOH B 19 619 112 HOH HOH . 
H 5 HOH B 20 620 60 HOH HOH . 
H 5 HOH B 21 621 111 HOH HOH . 
H 5 HOH B 22 622 105 HOH HOH . 
H 5 HOH B 23 623 10 HOH HOH . 
H 5 HOH B 24 624 86 HOH HOH . 
H 5 HOH B 25 625 12 HOH HOH . 
H 5 HOH B 26 626 84 HOH HOH . 
H 5 HOH B 27 627 42 HOH HOH . 
H 5 HOH B 28 628 75 HOH HOH . 
H 5 HOH B 29 629 55 HOH HOH . 
H 5 HOH B 30 630 69 HOH HOH . 
H 5 HOH B 31 631 29 HOH HOH . 
H 5 HOH B 32 632 35 HOH HOH . 
H 5 HOH B 33 633 58 HOH HOH . 
H 5 HOH B 34 634 83 HOH HOH . 
H 5 HOH B 35 635 47 HOH HOH . 
H 5 HOH B 36 636 118 HOH HOH . 
H 5 HOH B 37 637 80 HOH HOH . 
H 5 HOH B 38 638 109 HOH HOH . 
H 5 HOH B 39 639 78 HOH HOH . 
H 5 HOH B 40 640 67 HOH HOH . 
H 5 HOH B 41 641 8 HOH HOH . 
H 5 HOH B 42 642 15 HOH HOH . 
H 5 HOH B 43 643 90 HOH HOH . 
H 5 HOH B 44 644 26 HOH HOH . 
H 5 HOH B 45 645 13 HOH HOH . 
H 5 HOH B 46 646 94 HOH HOH . 
H 5 HOH B 47 647 120 HOH HOH . 
H 5 HOH B 48 648 64 HOH HOH . 
H 5 HOH B 49 649 41 HOH HOH . 
H 5 HOH B 50 650 34 HOH HOH . 
H 5 HOH B 51 651 104 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O OAA ME9 . . . E 3 -60.024 8.314 33.696 1 62.58 ? OAA ME9 501 B 1 
HETATM 2 O OAB ME9 . . . E 3 -56.84 6.498 31.022 1 47.43 ? OAB ME9 501 B 1 
HETATM 3 O OAC ME9 . . . E 3 -58.619 1.644 31.423 1 47.52 ? OAC ME9 501 B 1 
HETATM 4 O OAD ME9 . . . E 3 -60.796 1.965 27.455 1 68.52 ? OAD ME9 501 B 1 
HETATM 5 C CAE ME9 . . . E 3 -57.602 8.458 33.774 1 45.69 ? CAE ME9 501 B 1 
HETATM 6 C CAF ME9 . . . E 3 -56.685 7.754 33.132 1 48.11 ? CAF ME9 501 B 1 
HETATM 7 C CAG ME9 . . . E 3 -58.114 0.76 29.223 1 55.62 ? CAG ME9 501 B 1 
HETATM 8 C CAH ME9 . . . E 3 -58.604 1.068 28.036 1 64.14 ? CAH ME9 501 B 1 
HETATM 9 C CAI ME9 . . . E 3 -59.584 4.816 31.828 1 56.18 ? CAI ME9 501 B 1 
HETATM 10 C CAJ ME9 . . . E 3 -60.645 3.965 31.167 1 52.55 ? CAJ ME9 501 B 1 
HETATM 11 C CAK ME9 . . . E 3 -59.698 6.304 31.545 1 53.27 ? CAK ME9 501 B 1 
HETATM 12 C CAL ME9 . . . E 3 -60.287 3.604 29.757 1 62.37 ? CAL ME9 501 B 1 
HETATM 13 C CAM ME9 . . . E 3 -58.931 7.959 33.323 1 57.43 ? CAM ME9 501 B 1 
HETATM 14 C CAN ME9 . . . E 3 -57.335 7.037 31.992 1 44.53 ? CAN ME9 501 B 1 
HETATM 15 C CAO ME9 . . . E 3 -58.894 1.512 30.251 1 58.86 ? CAO ME9 501 B 1 
HETATM 16 C CAP ME9 . . . E 3 -59.954 1.662 28.268 1 67.25 ? CAP ME9 501 B 1 
HETATM 17 N NAQ ME9 . . . E 3 -58.69 7.073 32.271 1 48.96 ? NAQ ME9 501 B 1 
HETATM 18 N NAR ME9 . . . E 3 -59.876 2.214 29.539 1 64.06 ? NAR ME9 501 B 1 
#
_model_server_stats.io_time_ms              35 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           265 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           18 
#