data_7VS0 # _model_server_result.job_id 3gcU0b2-DTzh0NbDd4N9FQ _model_server_result.datetime_utc '2024-11-22 06:46:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7vs0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":503}' # _entry.id 7VS0 # _exptl.entry_id 7VS0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7VS0 _cell.length_a 52.496 _cell.length_b 71.782 _cell.length_c 32.124 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7VS0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall 'P 2 2ab' _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 164 n n C1 C2 GOL sing 165 n n C1 H11 GOL sing 166 n n C1 H12 GOL sing 167 n n O1 HO1 GOL sing 168 n n C2 O2 GOL sing 169 n n C2 C3 GOL sing 170 n n C2 H2 GOL sing 171 n n O2 HO2 GOL sing 172 n n C3 O3 GOL sing 173 n n C3 H31 GOL sing 174 n n C3 H32 GOL sing 175 n n O3 HO3 GOL sing 176 n n # _atom_sites.entry_id 7VS0 _atom_sites.fract_transf_matrix[1][1] 0.019049 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013931 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.031129 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 7UH A 1 501 501 7UH DOX . C 2 7UH A 1 502 801 7UH DOX . D 3 GOL A 1 503 701 GOL GOL . E 4 HOH A 1 601 155 HOH HOH . E 4 HOH A 2 602 65 HOH HOH . E 4 HOH A 3 603 183 HOH HOH . E 4 HOH A 4 604 133 HOH HOH . E 4 HOH A 5 605 106 HOH HOH . E 4 HOH A 6 606 138 HOH HOH . E 4 HOH A 7 607 81 HOH HOH . E 4 HOH A 8 608 110 HOH HOH . E 4 HOH A 9 609 102 HOH HOH . E 4 HOH A 10 610 82 HOH HOH . E 4 HOH A 11 611 51 HOH HOH . E 4 HOH A 12 612 1 HOH HOH . E 4 HOH A 13 613 118 HOH HOH . E 4 HOH A 14 614 33 HOH HOH . E 4 HOH A 15 615 18 HOH HOH . E 4 HOH A 16 616 100 HOH HOH . E 4 HOH A 17 617 146 HOH HOH . E 4 HOH A 18 618 15 HOH HOH . E 4 HOH A 19 619 50 HOH HOH . E 4 HOH A 20 620 149 HOH HOH . E 4 HOH A 21 621 5 HOH HOH . E 4 HOH A 22 622 58 HOH HOH . E 4 HOH A 23 623 16 HOH HOH . E 4 HOH A 24 624 66 HOH HOH . E 4 HOH A 25 625 137 HOH HOH . E 4 HOH A 26 626 99 HOH HOH . E 4 HOH A 27 627 14 HOH HOH . E 4 HOH A 28 628 123 HOH HOH . E 4 HOH A 29 629 120 HOH HOH . E 4 HOH A 30 630 32 HOH HOH . E 4 HOH A 31 631 186 HOH HOH . E 4 HOH A 32 632 79 HOH HOH . E 4 HOH A 33 633 56 HOH HOH . E 4 HOH A 34 634 136 HOH HOH . E 4 HOH A 35 635 78 HOH HOH . E 4 HOH A 36 636 35 HOH HOH . E 4 HOH A 37 637 64 HOH HOH . E 4 HOH A 38 638 119 HOH HOH . E 4 HOH A 39 639 74 HOH HOH . E 4 HOH A 40 640 148 HOH HOH . E 4 HOH A 41 641 23 HOH HOH . E 4 HOH A 42 642 113 HOH HOH . E 4 HOH A 43 643 10 HOH HOH . E 4 HOH A 44 644 135 HOH HOH . E 4 HOH A 45 645 38 HOH HOH . E 4 HOH A 46 646 95 HOH HOH . E 4 HOH A 47 647 20 HOH HOH . E 4 HOH A 48 648 170 HOH HOH . E 4 HOH A 49 649 19 HOH HOH . E 4 HOH A 50 650 96 HOH HOH . E 4 HOH A 51 651 86 HOH HOH . E 4 HOH A 52 652 11 HOH HOH . E 4 HOH A 53 653 46 HOH HOH . E 4 HOH A 54 654 13 HOH HOH . E 4 HOH A 55 655 3 HOH HOH . E 4 HOH A 56 656 71 HOH HOH . E 4 HOH A 57 657 52 HOH HOH . E 4 HOH A 58 658 12 HOH HOH . E 4 HOH A 59 659 24 HOH HOH . E 4 HOH A 60 660 111 HOH HOH . E 4 HOH A 61 661 87 HOH HOH . E 4 HOH A 62 662 161 HOH HOH . E 4 HOH A 63 663 62 HOH HOH . E 4 HOH A 64 664 42 HOH HOH . E 4 HOH A 65 665 121 HOH HOH . E 4 HOH A 66 666 27 HOH HOH . E 4 HOH A 67 667 134 HOH HOH . E 4 HOH A 68 668 141 HOH HOH . E 4 HOH A 69 669 9 HOH HOH . E 4 HOH A 70 670 157 HOH HOH . E 4 HOH A 71 671 169 HOH HOH . E 4 HOH A 72 672 88 HOH HOH . E 4 HOH A 73 673 17 HOH HOH . E 4 HOH A 74 674 180 HOH HOH . E 4 HOH A 75 675 194 HOH HOH . E 4 HOH A 76 676 6 HOH HOH . E 4 HOH A 77 677 54 HOH HOH . E 4 HOH A 78 678 60 HOH HOH . E 4 HOH A 79 679 7 HOH HOH . E 4 HOH A 80 680 152 HOH HOH . E 4 HOH A 81 681 122 HOH HOH . E 4 HOH A 82 682 31 HOH HOH . E 4 HOH A 83 683 4 HOH HOH . E 4 HOH A 84 684 83 HOH HOH . E 4 HOH A 85 685 181 HOH HOH . E 4 HOH A 86 686 139 HOH HOH . E 4 HOH A 87 687 200 HOH HOH . E 4 HOH A 88 688 80 HOH HOH . E 4 HOH A 89 689 67 HOH HOH . E 4 HOH A 90 690 193 HOH HOH . E 4 HOH A 91 691 112 HOH HOH . E 4 HOH A 92 692 203 HOH HOH . E 4 HOH A 93 693 8 HOH HOH . E 4 HOH A 94 694 104 HOH HOH . E 4 HOH A 95 695 188 HOH HOH . E 4 HOH A 96 696 28 HOH HOH . E 4 HOH A 97 697 69 HOH HOH . E 4 HOH A 98 698 192 HOH HOH . E 4 HOH A 99 699 26 HOH HOH . E 4 HOH A 100 700 59 HOH HOH . E 4 HOH A 101 701 2 HOH HOH . E 4 HOH A 102 702 43 HOH HOH . E 4 HOH A 103 703 98 HOH HOH . E 4 HOH A 104 704 189 HOH HOH . E 4 HOH A 105 705 143 HOH HOH . E 4 HOH A 106 706 124 HOH HOH . E 4 HOH A 107 707 130 HOH HOH . E 4 HOH A 108 708 36 HOH HOH . E 4 HOH A 109 709 162 HOH HOH . E 4 HOH A 110 710 172 HOH HOH . E 4 HOH A 111 711 76 HOH HOH . E 4 HOH A 112 712 177 HOH HOH . E 4 HOH A 113 713 25 HOH HOH . E 4 HOH A 114 714 89 HOH HOH . E 4 HOH A 115 715 84 HOH HOH . E 4 HOH A 116 716 131 HOH HOH . E 4 HOH A 117 717 116 HOH HOH . E 4 HOH A 118 718 44 HOH HOH . E 4 HOH A 119 719 125 HOH HOH . E 4 HOH A 120 720 108 HOH HOH . E 4 HOH A 121 721 168 HOH HOH . E 4 HOH A 122 722 61 HOH HOH . E 4 HOH A 123 723 109 HOH HOH . E 4 HOH A 124 724 199 HOH HOH . E 4 HOH A 125 725 75 HOH HOH . E 4 HOH A 126 726 55 HOH HOH . E 4 HOH A 127 727 97 HOH HOH . E 4 HOH A 128 728 156 HOH HOH . E 4 HOH A 129 729 90 HOH HOH . E 4 HOH A 130 730 128 HOH HOH . E 4 HOH A 131 731 105 HOH HOH . E 4 HOH A 132 732 117 HOH HOH . E 4 HOH A 133 733 147 HOH HOH . E 4 HOH A 134 734 198 HOH HOH . E 4 HOH A 135 735 63 HOH HOH . E 4 HOH A 136 736 191 HOH HOH . E 4 HOH A 137 737 140 HOH HOH . E 4 HOH A 138 738 176 HOH HOH . E 4 HOH A 139 739 145 HOH HOH . E 4 HOH A 140 740 126 HOH HOH . E 4 HOH A 141 741 166 HOH HOH . E 4 HOH A 142 742 40 HOH HOH . E 4 HOH A 143 743 159 HOH HOH . E 4 HOH A 144 744 144 HOH HOH . E 4 HOH A 145 745 91 HOH HOH . E 4 HOH A 146 746 197 HOH HOH . E 4 HOH A 147 747 202 HOH HOH . E 4 HOH A 148 748 185 HOH HOH . E 4 HOH A 149 749 182 HOH HOH . E 4 HOH A 150 750 94 HOH HOH . E 4 HOH A 151 751 93 HOH HOH . E 4 HOH A 152 752 190 HOH HOH . E 4 HOH A 153 753 187 HOH HOH . E 4 HOH A 154 754 174 HOH HOH . E 4 HOH A 155 755 151 HOH HOH . E 4 HOH A 156 756 154 HOH HOH . E 4 HOH A 157 757 37 HOH HOH . E 4 HOH A 158 758 153 HOH HOH . E 4 HOH A 159 759 92 HOH HOH . E 4 HOH A 160 760 127 HOH HOH . E 4 HOH A 161 761 103 HOH HOH . E 4 HOH A 162 762 53 HOH HOH . E 4 HOH A 163 763 73 HOH HOH . E 4 HOH A 164 764 114 HOH HOH . E 4 HOH A 165 765 129 HOH HOH . E 4 HOH A 166 766 41 HOH HOH . E 4 HOH A 167 767 22 HOH HOH . E 4 HOH A 168 768 48 HOH HOH . E 4 HOH A 169 769 160 HOH HOH . E 4 HOH A 170 770 49 HOH HOH . E 4 HOH A 171 771 85 HOH HOH . E 4 HOH A 172 772 195 HOH HOH . E 4 HOH A 173 773 57 HOH HOH . E 4 HOH A 174 774 30 HOH HOH . E 4 HOH A 175 775 68 HOH HOH . E 4 HOH A 176 776 150 HOH HOH . E 4 HOH A 177 777 142 HOH HOH . E 4 HOH A 178 778 163 HOH HOH . E 4 HOH A 179 779 158 HOH HOH . E 4 HOH A 180 780 47 HOH HOH . E 4 HOH A 181 781 173 HOH HOH . E 4 HOH A 182 782 21 HOH HOH . E 4 HOH A 183 783 39 HOH HOH . E 4 HOH A 184 784 101 HOH HOH . E 4 HOH A 185 785 184 HOH HOH . E 4 HOH A 186 786 34 HOH HOH . E 4 HOH A 187 787 70 HOH HOH . E 4 HOH A 188 788 107 HOH HOH . E 4 HOH A 189 789 132 HOH HOH . E 4 HOH A 190 790 165 HOH HOH . E 4 HOH A 191 791 205 HOH HOH . E 4 HOH A 192 792 175 HOH HOH . E 4 HOH A 193 793 201 HOH HOH . E 4 HOH A 194 794 72 HOH HOH . E 4 HOH A 195 795 167 HOH HOH . E 4 HOH A 196 796 29 HOH HOH . E 4 HOH A 197 797 45 HOH HOH . E 4 HOH A 198 798 77 HOH HOH . E 4 HOH A 199 799 115 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 3 16.134 -0.292 29.364 1 23.26 ? C1 GOL 503 A 1 HETATM 2 O O1 GOL . . . D 3 17.503 -0.446 29.186 1 25.71 ? O1 GOL 503 A 1 HETATM 3 C C2 GOL . . . D 3 15.969 1.108 29.961 1 21.05 ? C2 GOL 503 A 1 HETATM 4 O O2 GOL . . . D 3 15.114 1.899 29.209 1 21.07 ? O2 GOL 503 A 1 HETATM 5 C C3 GOL . . . D 3 15.514 0.878 31.423 1 19.23 ? C3 GOL 503 A 1 HETATM 6 O O3 GOL . . . D 3 15.476 2.131 32.057 1 16.33 ? O3 GOL 503 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #