data_7VS1 # _model_server_result.job_id d-kDhZmdX-Y19FmjFrerQw _model_server_result.datetime_utc '2024-11-26 22:03:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7vs1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 7VS1 # _exptl.entry_id 7VS1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 208.217 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-methyl-7-propyl-purine-2,6-dione _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7VS1 _cell.length_a 52.539 _cell.length_b 71.661 _cell.length_c 32.135 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7VS1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 52.539 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C9 H12 N4 O2' _chem_comp.formula_weight 208.217 _chem_comp.id 7UM _chem_comp.mon_nstd_flag . _chem_comp.name 3-methyl-7-propyl-purine-2,6-dione _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 7UM sing 1 n n C1 C2 7UM sing 2 n n C2 N 7UM sing 3 n n O C6 7UM doub 4 n n N C3 7UM sing 5 n y N C5 7UM sing 6 n y C6 C5 7UM sing 7 n n C6 N2 7UM sing 8 n n C3 N1 7UM doub 9 n y C5 C4 7UM doub 10 n y N2 C7 7UM sing 11 n n N1 C4 7UM sing 12 n y C4 N3 7UM sing 13 n n C7 N3 7UM sing 14 n n C7 O1 7UM doub 15 n n N3 C8 7UM sing 16 n n C1 H1 7UM sing 17 n n C1 H2 7UM sing 18 n n C2 H3 7UM sing 19 n n C2 H4 7UM sing 20 n n C3 H5 7UM sing 21 n n C H6 7UM sing 22 n n C H7 7UM sing 23 n n C H8 7UM sing 24 n n C8 H9 7UM sing 25 n n C8 H10 7UM sing 26 n n C8 H11 7UM sing 27 n n N2 H12 7UM sing 28 n n # _atom_sites.entry_id 7VS1 _atom_sites.fract_transf_matrix[1][1] 0.019033 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013955 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.031119 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 7UM A 1 501 501 7UM MPX . C 3 GOL A 1 502 601 GOL GOL . D 4 HOH A 1 601 222 HOH HOH . D 4 HOH A 2 602 231 HOH HOH . D 4 HOH A 3 603 224 HOH HOH . D 4 HOH A 4 604 57 HOH HOH . D 4 HOH A 5 605 201 HOH HOH . D 4 HOH A 6 606 62 HOH HOH . D 4 HOH A 7 607 50 HOH HOH . D 4 HOH A 8 608 102 HOH HOH . D 4 HOH A 9 609 244 HOH HOH . D 4 HOH A 10 610 228 HOH HOH . D 4 HOH A 11 611 175 HOH HOH . D 4 HOH A 12 612 115 HOH HOH . D 4 HOH A 13 613 235 HOH HOH . D 4 HOH A 14 614 203 HOH HOH . D 4 HOH A 15 615 82 HOH HOH . D 4 HOH A 16 616 25 HOH HOH . D 4 HOH A 17 617 61 HOH HOH . D 4 HOH A 18 618 137 HOH HOH . D 4 HOH A 19 619 144 HOH HOH . D 4 HOH A 20 620 4 HOH HOH . D 4 HOH A 21 621 176 HOH HOH . D 4 HOH A 22 622 149 HOH HOH . D 4 HOH A 23 623 71 HOH HOH . D 4 HOH A 24 624 173 HOH HOH . D 4 HOH A 25 625 204 HOH HOH . D 4 HOH A 26 626 85 HOH HOH . D 4 HOH A 27 627 66 HOH HOH . D 4 HOH A 28 628 92 HOH HOH . D 4 HOH A 29 629 117 HOH HOH . D 4 HOH A 30 630 234 HOH HOH . D 4 HOH A 31 631 79 HOH HOH . D 4 HOH A 32 632 15 HOH HOH . D 4 HOH A 33 633 68 HOH HOH . D 4 HOH A 34 634 14 HOH HOH . D 4 HOH A 35 635 193 HOH HOH . D 4 HOH A 36 636 95 HOH HOH . D 4 HOH A 37 637 13 HOH HOH . D 4 HOH A 38 638 196 HOH HOH . D 4 HOH A 39 639 182 HOH HOH . D 4 HOH A 40 640 219 HOH HOH . D 4 HOH A 41 641 3 HOH HOH . D 4 HOH A 42 642 199 HOH HOH . D 4 HOH A 43 643 177 HOH HOH . D 4 HOH A 44 644 21 HOH HOH . D 4 HOH A 45 645 51 HOH HOH . D 4 HOH A 46 646 97 HOH HOH . D 4 HOH A 47 647 78 HOH HOH . D 4 HOH A 48 648 29 HOH HOH . D 4 HOH A 49 649 172 HOH HOH . D 4 HOH A 50 650 227 HOH HOH . D 4 HOH A 51 651 20 HOH HOH . D 4 HOH A 52 652 70 HOH HOH . D 4 HOH A 53 653 59 HOH HOH . D 4 HOH A 54 654 103 HOH HOH . D 4 HOH A 55 655 98 HOH HOH . D 4 HOH A 56 656 195 HOH HOH . D 4 HOH A 57 657 167 HOH HOH . D 4 HOH A 58 658 52 HOH HOH . D 4 HOH A 59 659 8 HOH HOH . D 4 HOH A 60 660 11 HOH HOH . D 4 HOH A 61 661 83 HOH HOH . D 4 HOH A 62 662 170 HOH HOH . D 4 HOH A 63 663 168 HOH HOH . D 4 HOH A 64 664 60 HOH HOH . D 4 HOH A 65 665 174 HOH HOH . D 4 HOH A 66 666 84 HOH HOH . D 4 HOH A 67 667 2 HOH HOH . D 4 HOH A 68 668 17 HOH HOH . D 4 HOH A 69 669 185 HOH HOH . D 4 HOH A 70 670 9 HOH HOH . D 4 HOH A 71 671 128 HOH HOH . D 4 HOH A 72 672 7 HOH HOH . D 4 HOH A 73 673 110 HOH HOH . D 4 HOH A 74 674 36 HOH HOH . D 4 HOH A 75 675 81 HOH HOH . D 4 HOH A 76 676 166 HOH HOH . D 4 HOH A 77 677 129 HOH HOH . D 4 HOH A 78 678 180 HOH HOH . D 4 HOH A 79 679 94 HOH HOH . D 4 HOH A 80 680 39 HOH HOH . D 4 HOH A 81 681 22 HOH HOH . D 4 HOH A 82 682 214 HOH HOH . D 4 HOH A 83 683 89 HOH HOH . D 4 HOH A 84 684 192 HOH HOH . D 4 HOH A 85 685 134 HOH HOH . D 4 HOH A 86 686 53 HOH HOH . D 4 HOH A 87 687 164 HOH HOH . D 4 HOH A 88 688 181 HOH HOH . D 4 HOH A 89 689 118 HOH HOH . D 4 HOH A 90 690 18 HOH HOH . D 4 HOH A 91 691 163 HOH HOH . D 4 HOH A 92 692 16 HOH HOH . D 4 HOH A 93 693 223 HOH HOH . D 4 HOH A 94 694 146 HOH HOH . D 4 HOH A 95 695 80 HOH HOH . D 4 HOH A 96 696 155 HOH HOH . D 4 HOH A 97 697 10 HOH HOH . D 4 HOH A 98 698 151 HOH HOH . D 4 HOH A 99 699 106 HOH HOH . D 4 HOH A 100 700 113 HOH HOH . D 4 HOH A 101 701 75 HOH HOH . D 4 HOH A 102 702 42 HOH HOH . D 4 HOH A 103 703 186 HOH HOH . D 4 HOH A 104 704 28 HOH HOH . D 4 HOH A 105 705 5 HOH HOH . D 4 HOH A 106 706 49 HOH HOH . D 4 HOH A 107 707 96 HOH HOH . D 4 HOH A 108 708 32 HOH HOH . D 4 HOH A 109 709 76 HOH HOH . D 4 HOH A 110 710 206 HOH HOH . D 4 HOH A 111 711 31 HOH HOH . D 4 HOH A 112 712 226 HOH HOH . D 4 HOH A 113 713 165 HOH HOH . D 4 HOH A 114 714 41 HOH HOH . D 4 HOH A 115 715 202 HOH HOH . D 4 HOH A 116 716 55 HOH HOH . D 4 HOH A 117 717 133 HOH HOH . D 4 HOH A 118 718 33 HOH HOH . D 4 HOH A 119 719 114 HOH HOH . D 4 HOH A 120 720 69 HOH HOH . D 4 HOH A 121 721 122 HOH HOH . D 4 HOH A 122 722 99 HOH HOH . D 4 HOH A 123 723 189 HOH HOH . D 4 HOH A 124 724 187 HOH HOH . D 4 HOH A 125 725 91 HOH HOH . D 4 HOH A 126 726 136 HOH HOH . D 4 HOH A 127 727 6 HOH HOH . D 4 HOH A 128 728 215 HOH HOH . D 4 HOH A 129 729 123 HOH HOH . D 4 HOH A 130 730 45 HOH HOH . D 4 HOH A 131 731 87 HOH HOH . D 4 HOH A 132 732 127 HOH HOH . D 4 HOH A 133 733 197 HOH HOH . D 4 HOH A 134 734 30 HOH HOH . D 4 HOH A 135 735 194 HOH HOH . D 4 HOH A 136 736 205 HOH HOH . D 4 HOH A 137 737 37 HOH HOH . D 4 HOH A 138 738 171 HOH HOH . D 4 HOH A 139 739 34 HOH HOH . D 4 HOH A 140 740 26 HOH HOH . D 4 HOH A 141 741 243 HOH HOH . D 4 HOH A 142 742 169 HOH HOH . D 4 HOH A 143 743 183 HOH HOH . D 4 HOH A 144 744 238 HOH HOH . D 4 HOH A 145 745 188 HOH HOH . D 4 HOH A 146 746 19 HOH HOH . D 4 HOH A 147 747 54 HOH HOH . D 4 HOH A 148 748 46 HOH HOH . D 4 HOH A 149 749 74 HOH HOH . D 4 HOH A 150 750 150 HOH HOH . D 4 HOH A 151 751 72 HOH HOH . D 4 HOH A 152 752 210 HOH HOH . D 4 HOH A 153 753 86 HOH HOH . D 4 HOH A 154 754 153 HOH HOH . D 4 HOH A 155 755 73 HOH HOH . D 4 HOH A 156 756 200 HOH HOH . D 4 HOH A 157 757 105 HOH HOH . D 4 HOH A 158 758 43 HOH HOH . D 4 HOH A 159 759 156 HOH HOH . D 4 HOH A 160 760 116 HOH HOH . D 4 HOH A 161 761 111 HOH HOH . D 4 HOH A 162 762 191 HOH HOH . D 4 HOH A 163 763 130 HOH HOH . D 4 HOH A 164 764 135 HOH HOH . D 4 HOH A 165 765 64 HOH HOH . D 4 HOH A 166 766 198 HOH HOH . D 4 HOH A 167 767 139 HOH HOH . D 4 HOH A 168 768 126 HOH HOH . D 4 HOH A 169 769 232 HOH HOH . D 4 HOH A 170 770 65 HOH HOH . D 4 HOH A 171 771 147 HOH HOH . D 4 HOH A 172 772 56 HOH HOH . D 4 HOH A 173 773 27 HOH HOH . D 4 HOH A 174 774 216 HOH HOH . D 4 HOH A 175 775 132 HOH HOH . D 4 HOH A 176 776 90 HOH HOH . D 4 HOH A 177 777 152 HOH HOH . D 4 HOH A 178 778 124 HOH HOH . D 4 HOH A 179 779 12 HOH HOH . D 4 HOH A 180 780 160 HOH HOH . D 4 HOH A 181 781 179 HOH HOH . D 4 HOH A 182 782 145 HOH HOH . D 4 HOH A 183 783 158 HOH HOH . D 4 HOH A 184 784 47 HOH HOH . D 4 HOH A 185 785 101 HOH HOH . D 4 HOH A 186 786 229 HOH HOH . D 4 HOH A 187 787 109 HOH HOH . D 4 HOH A 188 788 242 HOH HOH . D 4 HOH A 189 789 1 HOH HOH . D 4 HOH A 190 790 213 HOH HOH . D 4 HOH A 191 791 190 HOH HOH . D 4 HOH A 192 792 140 HOH HOH . D 4 HOH A 193 793 44 HOH HOH . D 4 HOH A 194 794 138 HOH HOH . D 4 HOH A 195 795 233 HOH HOH . D 4 HOH A 196 796 161 HOH HOH . D 4 HOH A 197 797 162 HOH HOH . D 4 HOH A 198 798 241 HOH HOH . D 4 HOH A 199 799 157 HOH HOH . D 4 HOH A 200 800 220 HOH HOH . D 4 HOH A 201 801 119 HOH HOH . D 4 HOH A 202 802 77 HOH HOH . D 4 HOH A 203 803 63 HOH HOH . D 4 HOH A 204 804 48 HOH HOH . D 4 HOH A 205 805 24 HOH HOH . D 4 HOH A 206 806 131 HOH HOH . D 4 HOH A 207 807 120 HOH HOH . D 4 HOH A 208 808 104 HOH HOH . D 4 HOH A 209 809 217 HOH HOH . D 4 HOH A 210 810 178 HOH HOH . D 4 HOH A 211 811 209 HOH HOH . D 4 HOH A 212 812 184 HOH HOH . D 4 HOH A 213 813 207 HOH HOH . D 4 HOH A 214 814 230 HOH HOH . D 4 HOH A 215 815 143 HOH HOH . D 4 HOH A 216 816 107 HOH HOH . D 4 HOH A 217 817 40 HOH HOH . D 4 HOH A 218 818 148 HOH HOH . D 4 HOH A 219 819 108 HOH HOH . D 4 HOH A 220 820 141 HOH HOH . D 4 HOH A 221 821 35 HOH HOH . D 4 HOH A 222 822 142 HOH HOH . D 4 HOH A 223 823 208 HOH HOH . D 4 HOH A 224 824 221 HOH HOH . D 4 HOH A 225 825 154 HOH HOH . D 4 HOH A 226 826 121 HOH HOH . D 4 HOH A 227 827 38 HOH HOH . D 4 HOH A 228 828 245 HOH HOH . D 4 HOH A 229 829 240 HOH HOH . D 4 HOH A 230 830 211 HOH HOH . D 4 HOH A 231 831 218 HOH HOH . D 4 HOH A 232 832 100 HOH HOH . D 4 HOH A 233 833 58 HOH HOH . D 4 HOH A 234 834 23 HOH HOH . D 4 HOH A 235 835 159 HOH HOH . D 4 HOH A 236 836 212 HOH HOH . D 4 HOH A 237 837 239 HOH HOH . D 4 HOH A 238 838 112 HOH HOH . D 4 HOH A 239 839 225 HOH HOH . D 4 HOH A 240 840 125 HOH HOH . D 4 HOH A 241 841 236 HOH HOH . D 4 HOH A 242 842 237 HOH HOH . D 4 HOH A 243 843 88 HOH HOH . D 4 HOH A 244 844 93 HOH HOH . D 4 HOH A 245 845 67 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 7UM . . . B 2 7.538 -6.031 4.51 1 24.3 ? C1 7UM 501 A 1 HETATM 2 C C2 7UM . . . B 2 6.693 -5.925 5.767 1 22.93 ? C2 7UM 501 A 1 HETATM 3 C C3 7UM . . . B 2 7.17 -4.145 7.492 1 20.15 ? C3 7UM 501 A 1 HETATM 4 C C4 7UM . . . B 2 8.851 -4.926 8.498 1 17.96 ? C4 7UM 501 A 1 HETATM 5 C C5 7UM . . . B 2 8.52 -5.862 7.56 1 18.78 ? C5 7UM 501 A 1 HETATM 6 C C6 7UM . . . B 2 9.253 -7.085 7.402 1 18.93 ? C6 7UM 501 A 1 HETATM 7 N N 7UM . . . B 2 7.425 -5.341 6.902 1 20.7 ? N 7UM 501 A 1 HETATM 8 C C 7UM . . . B 2 8.084 -4.681 4.071 1 25.39 ? C 7UM 501 A 1 HETATM 9 O O 7UM . . . B 2 9.049 -7.99 6.593 1 19.69 ? O 7UM 501 A 1 HETATM 10 C C7 7UM . . . B 2 10.679 -6.26 9.255 1 16.37 ? C7 7UM 501 A 1 HETATM 11 C C8 7UM . . . B 2 10.388 -4.005 10.2 1 17.63 ? C8 7UM 501 A 1 HETATM 12 N N1 7UM . . . B 2 8.011 -3.856 8.463 1 19.1 ? N1 7UM 501 A 1 HETATM 13 N N2 7UM . . . B 2 10.302 -7.177 8.3 1 16.76 ? N2 7UM 501 A 1 HETATM 14 N N3 7UM . . . B 2 9.92 -5.099 9.345 1 17.11 ? N3 7UM 501 A 1 HETATM 15 O O1 7UM . . . B 2 11.637 -6.457 9.991 1 15.61 ? O1 7UM 501 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 36 _model_server_stats.query_time_ms 515 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 15 #