data_7VSF # _model_server_result.job_id MaipFp5bCraVWsn0S6RJYA _model_server_result.datetime_utc '2024-11-22 00:15:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7vsf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":202}' # _entry.id 7VSF # _exptl.entry_id 7VSF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.52 _cell.angle_gamma 90 _cell.entry_id 7VSF _cell.length_a 112.947 _cell.length_b 55.55 _cell.length_c 67.281 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7VSF _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,D,E,F,G,I,J 1 1 C,H,K 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 -4.130848 0 67.15407 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 111 n n N1 C6 EPE sing 112 n n N1 C9 EPE sing 113 n n C2 C3 EPE sing 114 n n C2 H21 EPE sing 115 n n C2 H22 EPE sing 116 n n C3 N4 EPE sing 117 n n C3 H31 EPE sing 118 n n C3 H32 EPE sing 119 n n N4 C5 EPE sing 120 n n N4 C7 EPE sing 121 n n C5 C6 EPE sing 122 n n C5 H51 EPE sing 123 n n C5 H52 EPE sing 124 n n C6 H61 EPE sing 125 n n C6 H62 EPE sing 126 n n C7 C8 EPE sing 127 n n C7 H71 EPE sing 128 n n C7 H72 EPE sing 129 n n C8 O8 EPE sing 130 n n C8 H81 EPE sing 131 n n C8 H82 EPE sing 132 n n O8 HO8 EPE sing 133 n n C9 C10 EPE sing 134 n n C9 H91 EPE sing 135 n n C9 H92 EPE sing 136 n n C10 S EPE sing 137 n n C10 H101 EPE sing 138 n n C10 H102 EPE sing 139 n n S O1S EPE doub 140 n n S O2S EPE doub 141 n n S O3S EPE sing 142 n n O3S HOS3 EPE sing 143 n n # _atom_sites.entry_id 7VSF _atom_sites.fract_transf_matrix[1][1] 0.008854 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000545 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018002 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014891 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 7UM A 1 201 201 7UM MPX . E 3 EPE A 1 202 301 EPE HPS . F 2 7UM B 1 201 201 7UM MPX . G 4 SO4 B 1 202 1 SO4 SO4 . H 2 7UM C 1 201 201 7UM MPX . I 5 HOH A 1 301 65 HOH HOH . I 5 HOH A 2 302 43 HOH HOH . I 5 HOH A 3 303 61 HOH HOH . I 5 HOH A 4 304 36 HOH HOH . I 5 HOH A 5 305 2 HOH HOH . I 5 HOH A 6 306 11 HOH HOH . I 5 HOH A 7 307 1 HOH HOH . I 5 HOH A 8 308 7 HOH HOH . I 5 HOH A 9 309 20 HOH HOH . I 5 HOH A 10 310 70 HOH HOH . I 5 HOH A 11 311 25 HOH HOH . I 5 HOH A 12 312 34 HOH HOH . I 5 HOH A 13 313 32 HOH HOH . I 5 HOH A 14 314 19 HOH HOH . I 5 HOH A 15 315 69 HOH HOH . I 5 HOH A 16 316 42 HOH HOH . I 5 HOH A 17 317 45 HOH HOH . I 5 HOH A 18 318 29 HOH HOH . I 5 HOH A 19 319 51 HOH HOH . I 5 HOH A 20 320 3 HOH HOH . I 5 HOH A 21 321 40 HOH HOH . I 5 HOH A 22 322 28 HOH HOH . I 5 HOH A 23 323 41 HOH HOH . I 5 HOH A 24 324 44 HOH HOH . I 5 HOH A 25 325 24 HOH HOH . I 5 HOH A 26 326 60 HOH HOH . I 5 HOH A 27 327 17 HOH HOH . I 5 HOH A 28 328 59 HOH HOH . I 5 HOH A 29 329 52 HOH HOH . I 5 HOH A 30 330 67 HOH HOH . I 5 HOH A 31 331 49 HOH HOH . I 5 HOH A 32 332 68 HOH HOH . I 5 HOH A 33 333 74 HOH HOH . I 5 HOH A 34 334 58 HOH HOH . I 5 HOH A 35 335 57 HOH HOH . J 5 HOH B 1 301 18 HOH HOH . J 5 HOH B 2 302 39 HOH HOH . J 5 HOH B 3 303 33 HOH HOH . J 5 HOH B 4 304 13 HOH HOH . J 5 HOH B 5 305 53 HOH HOH . J 5 HOH B 6 306 30 HOH HOH . J 5 HOH B 7 307 15 HOH HOH . J 5 HOH B 8 308 22 HOH HOH . J 5 HOH B 9 309 64 HOH HOH . J 5 HOH B 10 310 9 HOH HOH . J 5 HOH B 11 311 23 HOH HOH . J 5 HOH B 12 312 4 HOH HOH . J 5 HOH B 13 313 10 HOH HOH . J 5 HOH B 14 314 16 HOH HOH . J 5 HOH B 15 315 5 HOH HOH . J 5 HOH B 16 316 37 HOH HOH . J 5 HOH B 17 317 6 HOH HOH . J 5 HOH B 18 318 8 HOH HOH . J 5 HOH B 19 319 21 HOH HOH . J 5 HOH B 20 320 55 HOH HOH . J 5 HOH B 21 321 48 HOH HOH . J 5 HOH B 22 322 38 HOH HOH . J 5 HOH B 23 323 46 HOH HOH . J 5 HOH B 24 324 63 HOH HOH . J 5 HOH B 25 325 66 HOH HOH . J 5 HOH B 26 326 62 HOH HOH . J 5 HOH B 27 327 56 HOH HOH . K 5 HOH C 1 301 71 HOH HOH . K 5 HOH C 2 302 72 HOH HOH . K 5 HOH C 3 303 76 HOH HOH . K 5 HOH C 4 304 31 HOH HOH . K 5 HOH C 5 305 12 HOH HOH . K 5 HOH C 6 306 50 HOH HOH . K 5 HOH C 7 307 14 HOH HOH . K 5 HOH C 8 308 27 HOH HOH . K 5 HOH C 9 309 35 HOH HOH . K 5 HOH C 10 310 47 HOH HOH . K 5 HOH C 11 311 26 HOH HOH . K 5 HOH C 12 312 75 HOH HOH . K 5 HOH C 13 313 73 HOH HOH . K 5 HOH C 14 314 54 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . E 3 10.288 7.781 -9.417 1 66.97 ? N1 EPE 202 A 1 HETATM 2 C C2 EPE . . . E 3 11.598 8.367 -9.784 1 59.2 ? C2 EPE 202 A 1 HETATM 3 C C3 EPE . . . E 3 11.965 8.041 -11.231 1 55.41 ? C3 EPE 202 A 1 HETATM 4 N N4 EPE . . . E 3 11.977 6.588 -11.441 1 56.06 ? N4 EPE 202 A 1 HETATM 5 C C5 EPE . . . E 3 10.648 6.06 -11.141 1 56.6 ? C5 EPE 202 A 1 HETATM 6 C C6 EPE . . . E 3 10.286 6.337 -9.695 1 57.5 ? C6 EPE 202 A 1 HETATM 7 C C7 EPE . . . E 3 12.395 6.213 -12.797 1 50.92 ? C7 EPE 202 A 1 HETATM 8 C C8 EPE . . . E 3 13.621 6.953 -13.272 1 52.55 ? C8 EPE 202 A 1 HETATM 9 O O8 EPE . . . E 3 14.267 6.184 -14.282 1 61.64 ? O8 EPE 202 A 1 HETATM 10 C C9 EPE . . . E 3 9.953 8.045 -8.004 1 66.88 ? C9 EPE 202 A 1 HETATM 11 C C10 EPE . . . E 3 8.955 7.06 -7.4 1 68.11 ? C10 EPE 202 A 1 HETATM 12 S S EPE . . . E 3 8.208 7.585 -5.874 1 65.75 ? S EPE 202 A 1 HETATM 13 O O1S EPE . . . E 3 7.367 8.726 -6.175 1 65.39 ? O1S EPE 202 A 1 HETATM 14 O O2S EPE . . . E 3 7.471 6.455 -5.355 1 60.02 ? O2S EPE 202 A 1 HETATM 15 O O3S EPE . . . E 3 9.383 7.989 -4.947 1 58.01 ? O3S EPE 202 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 15 #