data_7VSI # _model_server_result.job_id qet6qDsp8nl42n7y0QgOzQ _model_server_result.datetime_utc '2025-03-25 09:26:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7vsi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":701}' # _entry.id 7VSI # _exptl.entry_id 7VSI _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 256.424 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PALMITIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7VSI _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7VSI _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 255 A CYS 255 1_555 A SG CYS 511 A CYS 511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? disulf ? disulf2 A SG CYS 345 A CYS 345 1_555 A SG CYS 351 A CYS 351 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf3 A SG CYS 355 A CYS 355 1_555 A SG CYS 361 A CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf4 A SG CYS 517 A CYS 517 1_555 A SG CYS 522 A CYS 522 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? covale ? covale1 A SG CYS 45 A CYS 45 1_555 D C1 PLM . A PLM 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.78 ? covale ? covale2 A SG CYS 547 A CYS 547 1_555 C C1 PLM . A PLM 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.767 ? # _chem_comp.formula 'C16 H32 O2' _chem_comp.formula_weight 256.424 _chem_comp.id PLM _chem_comp.mon_nstd_flag . _chem_comp.name 'PALMITIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PLM sing 319 n n C1 O2 PLM doub 320 n n C1 C2 PLM sing 321 n n O1 H PLM sing 322 n n C2 C3 PLM sing 323 n n C2 H21 PLM sing 324 n n C2 H22 PLM sing 325 n n C3 C4 PLM sing 326 n n C3 H31 PLM sing 327 n n C3 H32 PLM sing 328 n n C4 C5 PLM sing 329 n n C4 H41 PLM sing 330 n n C4 H42 PLM sing 331 n n C5 C6 PLM sing 332 n n C5 H51 PLM sing 333 n n C5 H52 PLM sing 334 n n C6 C7 PLM sing 335 n n C6 H61 PLM sing 336 n n C6 H62 PLM sing 337 n n C7 C8 PLM sing 338 n n C7 H71 PLM sing 339 n n C7 H72 PLM sing 340 n n C8 C9 PLM sing 341 n n C8 H81 PLM sing 342 n n C8 H82 PLM sing 343 n n C9 CA PLM sing 344 n n C9 H91 PLM sing 345 n n C9 H92 PLM sing 346 n n CA CB PLM sing 347 n n CA HA1 PLM sing 348 n n CA HA2 PLM sing 349 n n CB CC PLM sing 350 n n CB HB1 PLM sing 351 n n CB HB2 PLM sing 352 n n CC CD PLM sing 353 n n CC HC1 PLM sing 354 n n CC HC2 PLM sing 355 n n CD CE PLM sing 356 n n CD HD1 PLM sing 357 n n CD HD2 PLM sing 358 n n CE CF PLM sing 359 n n CE HE1 PLM sing 360 n n CE HE2 PLM sing 361 n n CF CG PLM sing 362 n n CF HF1 PLM sing 363 n n CF HF2 PLM sing 364 n n CG HG1 PLM sing 365 n n CG HG2 PLM sing 366 n n CG HG3 PLM sing 367 n n # _atom_sites.entry_id 7VSI _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PLM A 1 701 701 PLM PLM . D 3 PLM A 1 702 801 PLM PLM . E 4 7R3 A 1 703 1001 7R3 LIG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PLM . . . C 3 71.302 45.981 30.502 1 93.48 ? C1 PLM 701 A 1 HETATM 2 O O2 PLM . . . C 3 72.274 46.314 29.771 1 99.28 ? O2 PLM 701 A 1 HETATM 3 C C2 PLM . . . C 3 71.589 45.271 31.882 1 84.14 ? C2 PLM 701 A 1 HETATM 4 C C3 PLM . . . C 3 71.828 46.21 33.097 1 76.39 ? C3 PLM 701 A 1 HETATM 5 C C4 PLM . . . C 3 70.83 47.396 33.25 1 60.81 ? C4 PLM 701 A 1 HETATM 6 C C5 PLM . . . C 3 71.417 48.644 33.94 1 70.99 ? C5 PLM 701 A 1 HETATM 7 C C6 PLM . . . C 3 70.692 49.96 33.59 1 79.08 ? C6 PLM 701 A 1 HETATM 8 C C7 PLM . . . C 3 69.203 49.967 33.97 1 77.97 ? C7 PLM 701 A 1 HETATM 9 C C8 PLM . . . C 3 68.431 51.229 33.544 1 81.16 ? C8 PLM 701 A 1 HETATM 10 C C9 PLM . . . C 3 67.015 51.269 34.129 1 75.52 ? C9 PLM 701 A 1 HETATM 11 C CA PLM . . . C 3 66.26 52.605 33.926 1 75.89 ? CA PLM 701 A 1 HETATM 12 C CB PLM . . . C 3 64.9 52.699 34.677 1 61.19 ? CB PLM 701 A 1 HETATM 13 C CC PLM . . . C 3 65.026 52.668 36.214 1 67.21 ? CC PLM 701 A 1 HETATM 14 C CD PLM . . . C 3 63.691 52.662 36.986 1 74.87 ? CD PLM 701 A 1 HETATM 15 C CE PLM . . . C 3 63.863 52.705 38.529 1 74.97 ? CE PLM 701 A 1 HETATM 16 C CF PLM . . . C 3 64.644 51.51 39.128 1 72.46 ? CF PLM 701 A 1 HETATM 17 C CG PLM . . . C 3 64.812 51.581 40.653 1 72.09 ? CG PLM 701 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 17 #