data_7VSO # _model_server_result.job_id usM9FfMFt2pl2Od74BGQaQ _model_server_result.datetime_utc '2024-11-22 19:48:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7vso # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 7VSO # _exptl.entry_id 7VSO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 126.904 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IODIDE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7VSO _cell.length_a 46.2 _cell.length_b 103 _cell.length_c 128.7 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7VSO _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_565 x,-y+1,-z 1 0 0 0 -1 0 0 0 -1 0 103 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'I -1' _chem_comp.formula_weight 126.904 _chem_comp.id IOD _chem_comp.mon_nstd_flag . _chem_comp.name 'IODIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7VSO _atom_sites.fract_transf_matrix[1][1] 0.021645 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009709 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00777 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 RET A 1 301 300 RET RET . C 3 7YH A 1 302 1 7YH UNL . D 4 IOD A 1 303 1 IOD IOD . E 5 CPS A 1 304 10 CPS CPS . F 6 OCT A 1 305 200 OCT OCT . G 7 HP6 A 1 306 254 HP6 HP6 . H 8 D12 A 1 307 256 D12 D12 . I 9 R16 A 1 308 407 R16 R16 . J 10 D10 A 1 309 408 D10 D10 . K 9 R16 A 1 310 411 R16 R16 . L 7 HP6 A 1 311 401 HP6 HP6 . M 10 D10 A 1 312 250 D10 D10 . N 7 HP6 A 1 313 251 HP6 HP6 . O 7 HP6 A 1 314 252 HP6 HP6 . P 11 DD9 A 1 315 253 DD9 DD9 . Q 8 D12 A 1 316 255 D12 D12 . R 8 D12 A 1 317 257 D12 D12 . S 9 R16 A 1 318 259 R16 R16 . T 7 HP6 A 1 319 260 HP6 HP6 . U 6 OCT A 1 320 261 OCT OCT . V 12 HOH A 1 401 533 HOH HOH . V 12 HOH A 2 402 401 HOH HOH . V 12 HOH A 3 403 402 HOH HOH . V 12 HOH A 4 404 400 HOH HOH . V 12 HOH A 5 405 403 HOH HOH . V 12 HOH A 6 406 548 HOH HOH . V 12 HOH A 7 407 419 HOH HOH . V 12 HOH A 8 408 423 HOH HOH . V 12 HOH A 9 409 545 HOH HOH . V 12 HOH A 10 410 549 HOH HOH . V 12 HOH A 11 411 537 HOH HOH . V 12 HOH A 12 412 418 HOH HOH . V 12 HOH A 13 413 532 HOH HOH . V 12 HOH A 14 414 501 HOH HOH . V 12 HOH A 15 415 530 HOH HOH . V 12 HOH A 16 416 527 HOH HOH . V 12 HOH A 17 417 404 HOH HOH . V 12 HOH A 18 418 529 HOH HOH . V 12 HOH A 19 419 531 HOH HOH . V 12 HOH A 20 420 542 HOH HOH . V 12 HOH A 21 421 522 HOH HOH . V 12 HOH A 22 422 526 HOH HOH . V 12 HOH A 23 423 543 HOH HOH . V 12 HOH A 24 424 523 HOH HOH . V 12 HOH A 25 425 546 HOH HOH . V 12 HOH A 26 426 535 HOH HOH . V 12 HOH A 27 427 429 HOH HOH . V 12 HOH A 28 428 528 HOH HOH . V 12 HOH A 29 429 524 HOH HOH . V 12 HOH A 30 430 539 HOH HOH . V 12 HOH A 31 431 540 HOH HOH . V 12 HOH A 32 432 547 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol I _atom_site.label_atom_id I _atom_site.label_comp_id IOD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 12.501 _atom_site.Cartn_y 61.443 _atom_site.Cartn_z 9.486 _atom_site.occupancy 0.4 _atom_site.B_iso_or_equiv 132.77 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id I _atom_site.auth_comp_id IOD _atom_site.auth_seq_id 303 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #