data_7VTX # _model_server_result.job_id DT4GssUrwvoSG6zoqLf4EQ _model_server_result.datetime_utc '2024-10-20 20:39:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7vtx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":901}' # _entry.id 7VTX # _exptl.entry_id 7VTX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7VTX _cell.length_a 75.936 _cell.length_b 132.005 _cell.length_c 101.592 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7VTX _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall 'C 2c 2' _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 47 A CYS 528 1_555 A SG CYS 52 A CYS 533 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? metalc ? metalc1 A NE2 HIS 79 A HIS 560 1_555 B ZN ZN . A ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.568 ? metalc ? metalc2 A NE2 HIS 115 A HIS 596 1_555 B ZN ZN . A ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.63 ? metalc ? metalc3 A OD2 ASP 116 A ASP 597 1_555 B ZN ZN . A ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? metalc ? metalc4 A OD1 ASP 116 A ASP 597 1_555 C MG MG . A MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.17 ? metalc ? metalc5 A OD1 ASP 245 A ASP 726 1_555 B ZN ZN . A ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? metalc ? metalc6 B ZN ZN . A ZN 901 1_555 E O HOH . A HOH 1010 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? metalc ? metalc7 B ZN ZN . A ZN 901 1_555 E O HOH . A HOH 1033 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? metalc ? metalc8 C MG MG . A MG 902 1_555 E O HOH . A HOH 1013 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc9 C MG MG . A MG 902 1_555 E O HOH . A HOH 1016 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc10 C MG MG . A MG 902 1_555 E O HOH . A HOH 1028 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? metalc ? metalc11 C MG MG . A MG 902 1_555 E O HOH . A HOH 1033 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? metalc ? metalc12 C MG MG . A MG 902 1_555 E O HOH . A HOH 1057 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.95 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7VTX _atom_sites.fract_transf_matrix[1][1] 0.013169 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007575 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009843 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 901 1 ZN ZN . C 3 MG A 1 902 2 MG MG . D 4 80D A 1 903 1 80D XXX . E 5 HOH A 1 1001 39 HOH HOH . E 5 HOH A 2 1002 22 HOH HOH . E 5 HOH A 3 1003 53 HOH HOH . E 5 HOH A 4 1004 37 HOH HOH . E 5 HOH A 5 1005 3 HOH HOH . E 5 HOH A 6 1006 16 HOH HOH . E 5 HOH A 7 1007 40 HOH HOH . E 5 HOH A 8 1008 8 HOH HOH . E 5 HOH A 9 1009 19 HOH HOH . E 5 HOH A 10 1010 57 HOH HOH . E 5 HOH A 11 1011 30 HOH HOH . E 5 HOH A 12 1012 64 HOH HOH . E 5 HOH A 13 1013 59 HOH HOH . E 5 HOH A 14 1014 31 HOH HOH . E 5 HOH A 15 1015 54 HOH HOH . E 5 HOH A 16 1016 58 HOH HOH . E 5 HOH A 17 1017 43 HOH HOH . E 5 HOH A 18 1018 17 HOH HOH . E 5 HOH A 19 1019 41 HOH HOH . E 5 HOH A 20 1020 38 HOH HOH . E 5 HOH A 21 1021 18 HOH HOH . E 5 HOH A 22 1022 9 HOH HOH . E 5 HOH A 23 1023 29 HOH HOH . E 5 HOH A 24 1024 13 HOH HOH . E 5 HOH A 25 1025 52 HOH HOH . E 5 HOH A 26 1026 1 HOH HOH . E 5 HOH A 27 1027 61 HOH HOH . E 5 HOH A 28 1028 49 HOH HOH . E 5 HOH A 29 1029 55 HOH HOH . E 5 HOH A 30 1030 46 HOH HOH . E 5 HOH A 31 1031 42 HOH HOH . E 5 HOH A 32 1032 50 HOH HOH . E 5 HOH A 33 1033 62 HOH HOH . E 5 HOH A 34 1034 20 HOH HOH . E 5 HOH A 35 1035 12 HOH HOH . E 5 HOH A 36 1036 66 HOH HOH . E 5 HOH A 37 1037 11 HOH HOH . E 5 HOH A 38 1038 5 HOH HOH . E 5 HOH A 39 1039 7 HOH HOH . E 5 HOH A 40 1040 36 HOH HOH . E 5 HOH A 41 1041 28 HOH HOH . E 5 HOH A 42 1042 21 HOH HOH . E 5 HOH A 43 1043 33 HOH HOH . E 5 HOH A 44 1044 63 HOH HOH . E 5 HOH A 45 1045 2 HOH HOH . E 5 HOH A 46 1046 32 HOH HOH . E 5 HOH A 47 1047 6 HOH HOH . E 5 HOH A 48 1048 4 HOH HOH . E 5 HOH A 49 1049 10 HOH HOH . E 5 HOH A 50 1050 23 HOH HOH . E 5 HOH A 51 1051 65 HOH HOH . E 5 HOH A 52 1052 14 HOH HOH . E 5 HOH A 53 1053 26 HOH HOH . E 5 HOH A 54 1054 47 HOH HOH . E 5 HOH A 55 1055 15 HOH HOH . E 5 HOH A 56 1056 34 HOH HOH . E 5 HOH A 57 1057 60 HOH HOH . E 5 HOH A 58 1058 48 HOH HOH . E 5 HOH A 59 1059 25 HOH HOH . E 5 HOH A 60 1060 24 HOH HOH . E 5 HOH A 61 1061 51 HOH HOH . E 5 HOH A 62 1062 44 HOH HOH . E 5 HOH A 63 1063 45 HOH HOH . E 5 HOH A 64 1064 27 HOH HOH . E 5 HOH A 65 1065 67 HOH HOH . E 5 HOH A 66 1066 56 HOH HOH . E 5 HOH A 67 1067 35 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -5.442 _atom_site.Cartn_y -18.14 _atom_site.Cartn_z -2.625 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 36.28 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 901 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #