data_7VWG # _model_server_result.job_id nySZUd3c5Cx0mQKYYCfgdQ _model_server_result.datetime_utc '2024-11-26 20:15:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7vwg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":502}' # _entry.id 7VWG # _exptl.entry_id 7VWG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 437.452 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-2-[[4-propoxy-3-[[[4-(trifluoromethyl)phenyl]carbonylamino]methyl]phenyl]methyl]butanoic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.372 _cell.angle_gamma 90 _cell.entry_id 7VWG _cell.length_a 39.5 _cell.length_b 94.314 _cell.length_c 96.247 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7VWG _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C23 H26 F3 N O4' _chem_comp.formula_weight 437.452 _chem_comp.id 820 _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-2-[[4-propoxy-3-[[[4-(trifluoromethyl)phenyl]carbonylamino]methyl]phenyl]methyl]butanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O25 C1 820 doub 1 n n C5 C6 820 sing 2 n n C5 C2 820 sing 3 n n O26 C1 820 sing 4 n n C1 C2 820 sing 5 n n C6 C11 820 doub 6 n y C6 C7 820 sing 7 n y C11 C10 820 sing 8 n y C23 C22 820 sing 9 n n C7 C8 820 doub 10 n y C2 C3 820 sing 11 n n C10 C9 820 doub 12 n y C8 C9 820 sing 13 n y C8 C12 820 sing 14 n n C9 O33 820 sing 15 n n C21 C22 820 sing 16 n n C21 O33 820 sing 17 n n C12 N27 820 sing 18 n n C3 C4 820 sing 19 n n O28 C13 820 doub 20 n n N27 C13 820 sing 21 n n C13 C14 820 sing 22 n n C14 C19 820 doub 23 n y C14 C15 820 sing 24 n y C19 C18 820 sing 25 n y C15 C16 820 doub 26 n y C18 C17 820 doub 27 n y C16 C17 820 sing 28 n y C17 C20 820 sing 29 n n C20 F32 820 sing 30 n n C20 F30 820 sing 31 n n C20 F31 820 sing 32 n n C10 H1 820 sing 33 n n C11 H2 820 sing 34 n n C12 H3 820 sing 35 n n C12 H4 820 sing 36 n n C15 H5 820 sing 37 n n C16 H6 820 sing 38 n n C18 H7 820 sing 39 n n C19 H8 820 sing 40 n n C2 H9 820 sing 41 n n C21 H10 820 sing 42 n n C21 H11 820 sing 43 n n C22 H12 820 sing 44 n n C22 H13 820 sing 45 n n C23 H14 820 sing 46 n n C23 H15 820 sing 47 n n C23 H16 820 sing 48 n n C3 H17 820 sing 49 n n C3 H18 820 sing 50 n n C4 H19 820 sing 51 n n C4 H20 820 sing 52 n n C4 H21 820 sing 53 n n C5 H22 820 sing 54 n n C5 H23 820 sing 55 n n C7 H24 820 sing 56 n n N27 H25 820 sing 57 n n O26 H26 820 sing 58 n n # _atom_sites.entry_id 7VWG _atom_sites.fract_transf_matrix[1][1] 0.025316 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003275 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010603 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010477 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 B7G A 1 501 921 B7G B7G . D 3 820 A 1 502 922 820 JJF . E 2 B7G A 1 503 920 B7G B7G . F 3 820 B 1 501 923 820 JJF . G 4 HOH A 1 601 40 HOH HOH . G 4 HOH A 2 602 32 HOH HOH . G 4 HOH A 3 603 17 HOH HOH . G 4 HOH A 4 604 62 HOH HOH . G 4 HOH A 5 605 35 HOH HOH . G 4 HOH A 6 606 69 HOH HOH . G 4 HOH A 7 607 39 HOH HOH . G 4 HOH A 8 608 72 HOH HOH . G 4 HOH A 9 609 70 HOH HOH . G 4 HOH A 10 610 60 HOH HOH . G 4 HOH A 11 611 75 HOH HOH . G 4 HOH A 12 612 38 HOH HOH . G 4 HOH A 13 613 15 HOH HOH . G 4 HOH A 14 614 50 HOH HOH . G 4 HOH A 15 615 71 HOH HOH . G 4 HOH A 16 616 51 HOH HOH . G 4 HOH A 17 617 74 HOH HOH . G 4 HOH A 18 618 14 HOH HOH . G 4 HOH A 19 619 48 HOH HOH . G 4 HOH A 20 620 34 HOH HOH . G 4 HOH A 21 621 52 HOH HOH . G 4 HOH A 22 622 65 HOH HOH . G 4 HOH A 23 623 33 HOH HOH . G 4 HOH A 24 624 73 HOH HOH . G 4 HOH A 25 625 49 HOH HOH . G 4 HOH A 26 626 57 HOH HOH . G 4 HOH A 27 627 66 HOH HOH . G 4 HOH A 28 628 78 HOH HOH . G 4 HOH A 29 629 43 HOH HOH . G 4 HOH A 30 630 47 HOH HOH . G 4 HOH A 31 631 59 HOH HOH . G 4 HOH A 32 632 30 HOH HOH . G 4 HOH A 33 633 76 HOH HOH . G 4 HOH A 34 634 55 HOH HOH . G 4 HOH A 35 635 44 HOH HOH . G 4 HOH A 36 636 31 HOH HOH . G 4 HOH A 37 637 16 HOH HOH . H 4 HOH B 1 601 7 HOH HOH . H 4 HOH B 2 602 61 HOH HOH . H 4 HOH B 3 603 12 HOH HOH . H 4 HOH B 4 604 19 HOH HOH . H 4 HOH B 5 605 3 HOH HOH . H 4 HOH B 6 606 68 HOH HOH . H 4 HOH B 7 607 41 HOH HOH . H 4 HOH B 8 608 23 HOH HOH . H 4 HOH B 9 609 45 HOH HOH . H 4 HOH B 10 610 10 HOH HOH . H 4 HOH B 11 611 27 HOH HOH . H 4 HOH B 12 612 26 HOH HOH . H 4 HOH B 13 613 2 HOH HOH . H 4 HOH B 14 614 5 HOH HOH . H 4 HOH B 15 615 54 HOH HOH . H 4 HOH B 16 616 37 HOH HOH . H 4 HOH B 17 617 21 HOH HOH . H 4 HOH B 18 618 25 HOH HOH . H 4 HOH B 19 619 24 HOH HOH . H 4 HOH B 20 620 9 HOH HOH . H 4 HOH B 21 621 13 HOH HOH . H 4 HOH B 22 622 4 HOH HOH . H 4 HOH B 23 623 67 HOH HOH . H 4 HOH B 24 624 42 HOH HOH . H 4 HOH B 25 625 64 HOH HOH . H 4 HOH B 26 626 20 HOH HOH . H 4 HOH B 27 627 63 HOH HOH . H 4 HOH B 28 628 77 HOH HOH . H 4 HOH B 29 629 36 HOH HOH . H 4 HOH B 30 630 1 HOH HOH . H 4 HOH B 31 631 22 HOH HOH . H 4 HOH B 32 632 6 HOH HOH . H 4 HOH B 33 633 28 HOH HOH . H 4 HOH B 34 634 11 HOH HOH . H 4 HOH B 35 635 8 HOH HOH . H 4 HOH B 36 636 56 HOH HOH . H 4 HOH B 37 637 29 HOH HOH . H 4 HOH B 38 638 53 HOH HOH . H 4 HOH B 39 639 18 HOH HOH . H 4 HOH B 40 640 58 HOH HOH . H 4 HOH B 41 641 46 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 820 . . . D 3 19.326 -2.369 34.431 1 39.52 ? C1 820 502 A 1 HETATM 2 C C10 820 . . . D 3 18.032 3.625 35.156 1 33.31 ? C10 820 502 A 1 HETATM 3 C C11 820 . . . D 3 18.642 2.467 34.715 1 34.28 ? C11 820 502 A 1 HETATM 4 C C12 820 . . . D 3 14.543 2.371 35.979 1 31.45 ? C12 820 502 A 1 HETATM 5 C C13 820 . . . D 3 13.123 2.512 37.951 1 35.88 ? C13 820 502 A 1 HETATM 6 C C14 820 . . . D 3 12.974 2.887 39.399 1 43.43 ? C14 820 502 A 1 HETATM 7 C C15 820 . . . D 3 11.937 2.337 40.137 1 38.94 ? C15 820 502 A 1 HETATM 8 C C16 820 . . . D 3 11.775 2.653 41.475 1 33.48 ? C16 820 502 A 1 HETATM 9 C C17 820 . . . D 3 12.657 3.526 42.085 1 34.84 ? C17 820 502 A 1 HETATM 10 C C18 820 . . . D 3 13.703 4.072 41.362 1 41.53 ? C18 820 502 A 1 HETATM 11 C C19 820 . . . D 3 13.86 3.75 40.025 1 35.56 ? C19 820 502 A 1 HETATM 12 C C2 820 . . . D 3 18.703 -1.159 35.139 1 36.75 ? C2 820 502 A 1 HETATM 13 C C20 820 . . . D 3 12.487 3.866 43.529 1 40.15 ? C20 820 502 A 1 HETATM 14 C C21 820 . . . D 3 16.677 5.971 35.832 1 34.22 ? C21 820 502 A 1 HETATM 15 C C22 820 . . . D 3 15.683 7.087 35.994 1 43.25 ? C22 820 502 A 1 HETATM 16 C C23 820 . . . D 3 14.669 7.104 34.88 1 29.27 ? C23 820 502 A 1 HETATM 17 C C3 820 . . . D 3 19.486 -0.811 36.415 1 30.54 ? C3 820 502 A 1 HETATM 18 C C4 820 . . . D 3 19.655 -1.994 37.344 1 33.09 ? C4 820 502 A 1 HETATM 19 C C5 820 . . . D 3 18.643 0.017 34.16 1 34.85 ? C5 820 502 A 1 HETATM 20 C C6 820 . . . D 3 17.964 1.262 34.68 1 33.21 ? C6 820 502 A 1 HETATM 21 C C7 820 . . . D 3 16.628 1.251 35.084 1 30.38 ? C7 820 502 A 1 HETATM 22 C C8 820 . . . D 3 15.986 2.399 35.547 1 32.61 ? C8 820 502 A 1 HETATM 23 C C9 820 . . . D 3 16.713 3.592 35.574 1 32.39 ? C9 820 502 A 1 HETATM 24 F F30 820 . . . D 3 13.163 4.952 43.889 1 44.74 ? F30 820 502 A 1 HETATM 25 F F31 820 . . . D 3 12.894 2.895 44.34 1 43.52 ? F31 820 502 A 1 HETATM 26 F F32 820 . . . D 3 11.221 4.103 43.854 1 42.54 ? F32 820 502 A 1 HETATM 27 N N27 820 . . . D 3 14.321 2.687 37.387 1 40.26 ? N27 820 502 A 1 HETATM 28 O O25 820 . . . D 3 18.582 -3.324 34.133 1 31.7 ? O25 820 502 A 1 HETATM 29 O O26 820 . . . D 3 20.548 -2.336 34.18 1 31.22 ? O26 820 502 A 1 HETATM 30 O O28 820 . . . D 3 12.164 2.073 37.318 1 47.1 ? O28 820 502 A 1 HETATM 31 O O33 820 . . . D 3 16.037 4.701 36.002 1 41.16 ? O33 820 502 A 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 344 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 31 #