data_7VXS
#
_model_server_result.job_id            SUnFeOpZqsS_2ADnPBd5cA 
_model_server_result.datetime_utc      '2024-12-21 17:04:31' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7vxs 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"UA","auth_seq_id":101}' 
#
_entry.id    7VXS 
#
_exptl.entry_id    7VXS 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              767.132 
_entity.id                          33 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7VXS 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7VXS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    29-meric 
_pdbx_struct_assembly.oligomeric_count      29 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 33 JA N N 
? 33 NA N N 
? 33 OA N N 
? 33 UA N N 
? 33 XA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 D SG CYS 17 V CYS 18 1_555 D SG CYS 74 V CYS 75 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf2 D SG CYS 94 V CYS 95 1_555 D SG CYS 114 V CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf3 L SG CYS 112 d CYS 113 1_555 L SG CYS 124 d CYS 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf4 P SG CYS 32 h CYS 33 1_555 P SG CYS 65 h CYS 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf5 P SG CYS 42 h CYS 43 1_555 P SG CYS 55 h CYS 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf6 AA SG CYS 77 u CYS 78 1_555 AA SG CYS 109 u CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf7 AA SG CYS 87 u CYS 88 1_555 AA SG CYS 99 u CYS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
#
_chem_comp.formula           'C42 H89 N O8 P 1' 
_chem_comp.formula_weight    767.132 
_chem_comp.id                PLX 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     7VXS 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
DA 30 CDL V 1 201 201 CDL CDL . 
EA 30 CDL V 1 202 203 CDL CDL . 
FA 31 PEE W 1 201 202 PEE PEE . 
GA 32 8Q1 X 1 201 201 8Q1 8Q1 . 
HA 30 CDL a 1 201 201 CDL CDL . 
IA 31 PEE b 1 201 720 PEE PEE . 
JA 33 PLX g 1 201 705 PLX PLX . 
KA 30 CDL i 1 401 401 CDL CDL . 
LA 31 PEE i 1 402 718 PEE PEE . 
MA 31 PEE j 1 201 101 PEE PEE . 
NA 33 PLX j 1 202 202 PLX PLX . 
OA 33 PLX j 1 203 203 PLX PLX . 
PA 31 PEE l 1 701 207 PEE PEE . 
QA 30 CDL l 1 702 712 CDL CDL . 
RA 30 CDL l 1 703 713 CDL CDL . 
SA 31 PEE l 1 704 719 PEE PEE . 
TA 30 CDL m 1 201 101 CDL CDL . 
UA 33 PLX n 1 101 101 PLX PLX . 
VA 30 CDL n 1 102 102 CDL CDL . 
WA 31 PEE r 1 501 202 PEE PEE . 
XA 33 PLX r 1 502 201 PLX PLX . 
YA 30 CDL r 1 503 714 CDL CDL . 
ZA 31 PEE s 1 401 201 PEE PEE . 
AB 30 CDL s 1 402 201 CDL CDL . 
BB 31 PEE s 1 403 401 PEE PEE . 
CB 34 ADP w 1 401 401 ADP ADP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C23 PLX . . . UA 33 248.735 179.642 119.572 1 90.06 ? C23 PLX 101 n 1 
HETATM 2 C C22 PLX . . . UA 33 248.983 180.163 121.021 1 93.93 ? C22 PLX 101 n 1 
HETATM 3 C C21 PLX . . . UA 33 248.539 181.651 121.204 1 87.82 ? C21 PLX 101 n 1 
HETATM 4 C C20 PLX . . . UA 33 247.008 181.85 120.949 1 91.63 ? C20 PLX 101 n 1 
HETATM 5 C C19 PLX . . . UA 33 246.128 180.99 121.917 1 92.3 ? C19 PLX 101 n 1 
HETATM 6 C C18 PLX . . . UA 33 244.612 180.957 121.493 1 89.34 ? C18 PLX 101 n 1 
HETATM 7 C C17 PLX . . . UA 33 243.706 180.31 122.613 1 89.14 ? C17 PLX 101 n 1 
HETATM 8 C C16 PLX . . . UA 33 242.584 179.382 122.032 1 89.19 ? C16 PLX 101 n 1 
HETATM 9 C C15 PLX . . . UA 33 242.31 178.136 122.958 1 87.78 ? C15 PLX 101 n 1 
HETATM 10 C C14 PLX . . . UA 33 241.032 178.317 123.846 1 89.31 ? C14 PLX 101 n 1 
HETATM 11 C C13 PLX . . . UA 33 239.824 177.433 123.356 1 91.38 ? C13 PLX 101 n 1 
HETATM 12 C C12 PLX . . . UA 33 238.449 178.154 123.558 1 91.88 ? C12 PLX 101 n 1 
HETATM 13 C C11 PLX . . . UA 33 237.294 177.154 123.905 1 88.4 ? C11 PLX 101 n 1 
HETATM 14 C C10 PLX . . . UA 33 236.322 176.938 122.701 1 86.69 ? C10 PLX 101 n 1 
HETATM 15 C C9 PLX . . . UA 33 235.975 175.421 122.48 1 87.41 ? C9 PLX 101 n 1 
HETATM 16 C C8 PLX . . . UA 33 234.989 175.204 121.27 1 83.34 ? C8 PLX 101 n 1 
HETATM 17 C C7 PLX . . . UA 33 234.257 173.807 121.333 1 86.45 ? C7 PLX 101 n 1 
HETATM 18 C C6 PLX . . . UA 33 233.759 173.348 119.936 1 90.01 ? C6 PLX 101 n 1 
HETATM 19 O O7 PLX . . . UA 33 233.417 174.452 119.187 1 89.79 ? O7 PLX 101 n 1 
HETATM 20 O O6 PLX . . . UA 33 234.793 172.636 119.278 1 96.91 ? O6 PLX 101 n 1 
HETATM 21 C C4 PLX . . . UA 33 234.375 171.423 118.706 1 92.41 ? C4 PLX 101 n 1 
HETATM 22 C C3 PLX . . . UA 33 234.124 171.619 117.204 1 87.39 ? C3 PLX 101 n 1 
HETATM 23 O O4 PLX . . . UA 33 233.071 170.733 116.813 1 92.85 ? O4 PLX 101 n 1 
HETATM 24 P P1 PLX . . . UA 33 233.309 169.772 115.463 1 118.77 ? P1 PLX 101 n 1 
HETATM 25 O O1 PLX . . . UA 33 234.439 170.482 114.458 1 95.18 ? O1 PLX 101 n 1 
HETATM 26 C C2 PLX . . . UA 33 233.977 171.312 113.39 1 90.19 ? C2 PLX 101 n 1 
HETATM 27 C C1 PLX . . . UA 33 235.213 171.775 112.542 1 90.21 ? C1 PLX 101 n 1 
HETATM 28 N N1 PLX . . . UA 33 235.785 170.662 111.705 1 97.97 ? N1 PLX 101 n 1 
HETATM 29 C C1C PLX . . . UA 33 234.656 169.933 111.091 1 93.72 ? C1C PLX 101 n 1 
HETATM 30 C C1B PLX . . . UA 33 236.615 171.318 110.651 1 92.99 ? C1B PLX 101 n 1 
HETATM 31 C C1A PLX . . . UA 33 236.654 169.64 112.343 1 92.37 ? C1A PLX 101 n 1 
HETATM 32 O O2 PLX . . . UA 33 232.004 169.6 114.716 1 100.14 ? O2 PLX 101 n 1 
HETATM 33 C C5 PLX . . . UA 33 235.471 170.358 118.896 1 91.22 ? C5 PLX 101 n 1 
HETATM 34 O O8 PLX . . . UA 33 236.241 170.698 120.051 1 99.06 ? O8 PLX 101 n 1 
HETATM 35 C C24 PLX . . . UA 33 237.606 170.928 119.776 1 95.29 ? C24 PLX 101 n 1 
HETATM 36 O O9 PLX . . . UA 33 238.224 169.73 119.444 1 94.65 ? O9 PLX 101 n 1 
HETATM 37 C C25 PLX . . . UA 33 238.292 171.536 121.019 1 93.19 ? C25 PLX 101 n 1 
HETATM 38 C C26 PLX . . . UA 33 237.856 170.849 122.352 1 87.96 ? C26 PLX 101 n 1 
HETATM 39 C C27 PLX . . . UA 33 238.831 171.184 123.525 1 90.51 ? C27 PLX 101 n 1 
HETATM 40 C C28 PLX . . . UA 33 238.116 171.909 124.715 1 92.59 ? C28 PLX 101 n 1 
HETATM 41 C C29 PLX . . . UA 33 238.995 173.052 125.32 1 92.49 ? C29 PLX 101 n 1 
HETATM 42 C C30 PLX . . . UA 33 239.307 172.834 126.85 1 95.67 ? C30 PLX 101 n 1 
HETATM 43 C C31 PLX . . . UA 33 240.805 173.173 127.21 1 94.67 ? C31 PLX 101 n 1 
HETATM 44 C C32 PLX . . . UA 33 240.941 173.875 128.619 1 88.74 ? C32 PLX 101 n 1 
HETATM 45 C C33 PLX . . . UA 33 242.225 173.404 129.412 1 89.64 ? C33 PLX 101 n 1 
HETATM 46 C C34 PLX . . . UA 33 241.861 172.536 130.683 1 87.77 ? C34 PLX 101 n 1 
HETATM 47 C C35 PLX . . . UA 33 243.149 172.072 131.486 1 89.44 ? C35 PLX 101 n 1 
HETATM 48 C C36 PLX . . . UA 33 242.828 170.933 132.518 1 93.36 ? C36 PLX 101 n 1 
HETATM 49 C C37 PLX . . . UA 33 243.964 170.752 133.588 1 92.91 ? C37 PLX 101 n 1 
HETATM 50 C C38 PLX . . . UA 33 243.683 169.551 134.548 1 91.56 ? C38 PLX 101 n 1 
HETATM 51 C C39 PLX . . . UA 33 244.578 169.583 135.813 1 89.77 ? C39 PLX 101 n 1 
HETATM 52 O O3 PLX . . . UA 33 233.818 168.414 115.902 1 101.01 ? O3 PLX 101 n 1 
#
_model_server_stats.io_time_ms              29 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    49 
_model_server_stats.query_time_ms           326 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           52 
#