data_7VXS # _model_server_result.job_id 10d_n6NvnkqcygwhP4l0hA _model_server_result.datetime_utc '2024-12-21 16:42:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7vxs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"PA","auth_seq_id":701}' # _entry.id 7VXS # _exptl.entry_id 7VXS _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 744.034 _entity.id 31 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7VXS _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7VXS _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 29-meric _pdbx_struct_assembly.oligomeric_count 29 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 31 FA N N ? 31 IA N N ? 31 LA N N ? 31 MA N N ? 31 PA N N ? 31 SA N N ? 31 WA N N ? 31 ZA N N ? 31 BB N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 D SG CYS 17 V CYS 18 1_555 D SG CYS 74 V CYS 75 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 D SG CYS 94 V CYS 95 1_555 D SG CYS 114 V CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 L SG CYS 112 d CYS 113 1_555 L SG CYS 124 d CYS 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf4 P SG CYS 32 h CYS 33 1_555 P SG CYS 65 h CYS 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf5 P SG CYS 42 h CYS 43 1_555 P SG CYS 55 h CYS 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf6 AA SG CYS 77 u CYS 78 1_555 AA SG CYS 109 u CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf7 AA SG CYS 87 u CYS 88 1_555 AA SG CYS 99 u CYS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? # _chem_comp.formula 'C41 H78 N O8 P' _chem_comp.formula_weight 744.034 _chem_comp.id PEE _chem_comp.mon_nstd_flag n _chem_comp.name 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms DOPE # _atom_sites.entry_id 7VXS _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code DA 30 CDL V 1 201 201 CDL CDL . EA 30 CDL V 1 202 203 CDL CDL . FA 31 PEE W 1 201 202 PEE PEE . GA 32 8Q1 X 1 201 201 8Q1 8Q1 . HA 30 CDL a 1 201 201 CDL CDL . IA 31 PEE b 1 201 720 PEE PEE . JA 33 PLX g 1 201 705 PLX PLX . KA 30 CDL i 1 401 401 CDL CDL . LA 31 PEE i 1 402 718 PEE PEE . MA 31 PEE j 1 201 101 PEE PEE . NA 33 PLX j 1 202 202 PLX PLX . OA 33 PLX j 1 203 203 PLX PLX . PA 31 PEE l 1 701 207 PEE PEE . QA 30 CDL l 1 702 712 CDL CDL . RA 30 CDL l 1 703 713 CDL CDL . SA 31 PEE l 1 704 719 PEE PEE . TA 30 CDL m 1 201 101 CDL CDL . UA 33 PLX n 1 101 101 PLX PLX . VA 30 CDL n 1 102 102 CDL CDL . WA 31 PEE r 1 501 202 PEE PEE . XA 33 PLX r 1 502 201 PLX PLX . YA 30 CDL r 1 503 714 CDL CDL . ZA 31 PEE s 1 401 201 PEE PEE . AB 30 CDL s 1 402 201 CDL CDL . BB 31 PEE s 1 403 401 PEE PEE . CB 34 ADP w 1 401 401 ADP ADP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C21 PEE . . . PA 31 180.782 185.507 137.821 1 97.7 ? C21 PEE 701 l 1 HETATM 2 C C20 PEE . . . PA 31 180.988 186.807 138.6 1 100.22 ? C20 PEE 701 l 1 HETATM 3 C C19 PEE . . . PA 31 182.457 187.044 138.953 1 103.29 ? C19 PEE 701 l 1 HETATM 4 C C18 PEE . . . PA 31 182.708 188.45 139.503 1 103.94 ? C18 PEE 701 l 1 HETATM 5 C C17 PEE . . . PA 31 181.902 188.732 140.772 1 101.6 ? C17 PEE 701 l 1 HETATM 6 C C16 PEE . . . PA 31 182.668 189.621 141.752 1 100.62 ? C16 PEE 701 l 1 HETATM 7 C C15 PEE . . . PA 31 181.793 190.089 142.915 1 97.5 ? C15 PEE 701 l 1 HETATM 8 C C14 PEE . . . PA 31 182.614 190.379 144.174 1 101.13 ? C14 PEE 701 l 1 HETATM 9 C C13 PEE . . . PA 31 181.724 190.657 145.39 1 102.36 ? C13 PEE 701 l 1 HETATM 10 C C12 PEE . . . PA 31 182.546 190.955 146.651 1 98.22 ? C12 PEE 701 l 1 HETATM 11 C C11 PEE . . . PA 31 182.264 192.358 147.2 1 99.89 ? C11 PEE 701 l 1 HETATM 12 C C10 PEE . . . PA 31 181.228 192.35 148.331 1 103.34 ? C10 PEE 701 l 1 HETATM 13 O O4 PEE . . . PA 31 180.126 191.968 148.124 1 99.7 ? O4 PEE 701 l 1 HETATM 14 O O2 PEE . . . PA 31 181.587 192.802 149.609 1 110.4 ? O2 PEE 701 l 1 HETATM 15 C C2 PEE . . . PA 31 181.165 194.111 149.88 1 105.92 ? C2 PEE 701 l 1 HETATM 16 C C1 PEE . . . PA 31 180.173 194.1 151.044 1 101.9 ? C1 PEE 701 l 1 HETATM 17 O O3P PEE . . . PA 31 180.829 194.549 152.201 1 107.79 ? O3P PEE 701 l 1 HETATM 18 P P PEE . . . PA 31 181.008 193.495 153.463 1 124.64 ? P PEE 701 l 1 HETATM 19 O O2P PEE . . . PA 31 182.477 193.224 153.688 1 106.66 ? O2P PEE 701 l 1 HETATM 20 O O1P PEE . . . PA 31 180.299 192.202 153.14 1 105.6 ? O1P PEE 701 l 1 HETATM 21 O O4P PEE . . . PA 31 180.353 194.16 154.827 1 109.86 ? O4P PEE 701 l 1 HETATM 22 C C4 PEE . . . PA 31 179.724 193.311 155.754 1 104.31 ? C4 PEE 701 l 1 HETATM 23 C C5 PEE . . . PA 31 179.435 194.116 157.022 1 104.07 ? C5 PEE 701 l 1 HETATM 24 N N PEE . . . PA 31 178.26 194.948 156.834 1 103.75 ? N PEE 701 l 1 HETATM 25 C C3 PEE . . . PA 31 182.374 194.975 150.233 1 102.47 ? C3 PEE 701 l 1 HETATM 26 O O3 PEE . . . PA 31 183.409 194.673 149.34 1 105.73 ? O3 PEE 701 l 1 HETATM 27 C C30 PEE . . . PA 31 183.834 195.76 148.564 1 105.75 ? C30 PEE 701 l 1 HETATM 28 O O5 PEE . . . PA 31 184.252 196.736 149.091 1 106.08 ? O5 PEE 701 l 1 HETATM 29 C C31 PEE . . . PA 31 183.761 195.689 147.037 1 102.32 ? C31 PEE 701 l 1 HETATM 30 C C32 PEE . . . PA 31 185.031 195.121 146.399 1 101.11 ? C32 PEE 701 l 1 HETATM 31 C C33 PEE . . . PA 31 184.98 195.2 144.871 1 100.22 ? C33 PEE 701 l 1 HETATM 32 C C34 PEE . . . PA 31 184.006 194.187 144.264 1 99.78 ? C34 PEE 701 l 1 HETATM 33 C C35 PEE . . . PA 31 183.071 194.823 143.23 1 99.19 ? C35 PEE 701 l 1 HETATM 34 C C36 PEE . . . PA 31 182.59 193.816 142.18 1 99.97 ? C36 PEE 701 l 1 HETATM 35 C C37 PEE . . . PA 31 181.812 194.488 141.048 1 99.62 ? C37 PEE 701 l 1 HETATM 36 C C38 PEE . . . PA 31 182.372 194.136 139.67 1 102.2 ? C38 PEE 701 l 1 HETATM 37 C C39 PEE . . . PA 31 181.347 193.44 138.78 1 101.68 ? C39 PEE 701 l 1 HETATM 38 C C40 PEE . . . PA 31 182.004 192.691 137.625 1 99.98 ? C40 PEE 701 l 1 HETATM 39 C C41 PEE . . . PA 31 180.991 192.21 136.594 1 99.9 ? C41 PEE 701 l 1 HETATM 40 C C42 PEE . . . PA 31 181.547 191.094 135.718 1 100.95 ? C42 PEE 701 l 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 41 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 40 #