data_7VXS
#
_model_server_result.job_id            nC3BM-dccjmmV9niV85ZNw 
_model_server_result.datetime_utc      '2024-12-21 16:56:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7vxs 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"SA","auth_seq_id":704}' 
#
_entry.id    7VXS 
#
_exptl.entry_id    7VXS 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              744.034 
_entity.id                          31 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-dioleoyl-sn-glycero-3-phosphoethanolamine 
_entity.pdbx_number_of_molecules    9 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7VXS 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7VXS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    29-meric 
_pdbx_struct_assembly.oligomeric_count      29 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 31 FA N N 
? 31 IA N N 
? 31 LA N N 
? 31 MA N N 
? 31 PA N N 
? 31 SA N N 
? 31 WA N N 
? 31 ZA N N 
? 31 BB N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 D SG CYS 17 V CYS 18 1_555 D SG CYS 74 V CYS 75 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf2 D SG CYS 94 V CYS 95 1_555 D SG CYS 114 V CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf3 L SG CYS 112 d CYS 113 1_555 L SG CYS 124 d CYS 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf4 P SG CYS 32 h CYS 33 1_555 P SG CYS 65 h CYS 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf5 P SG CYS 42 h CYS 43 1_555 P SG CYS 55 h CYS 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf6 AA SG CYS 77 u CYS 78 1_555 AA SG CYS 109 u CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf7 AA SG CYS 87 u CYS 88 1_555 AA SG CYS 99 u CYS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
#
_chem_comp.formula           'C41 H78 N O8 P' 
_chem_comp.formula_weight    744.034 
_chem_comp.id                PEE 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              1,2-dioleoyl-sn-glycero-3-phosphoethanolamine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     DOPE 
#
_atom_sites.entry_id                     7VXS 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
DA 30 CDL V 1 201 201 CDL CDL . 
EA 30 CDL V 1 202 203 CDL CDL . 
FA 31 PEE W 1 201 202 PEE PEE . 
GA 32 8Q1 X 1 201 201 8Q1 8Q1 . 
HA 30 CDL a 1 201 201 CDL CDL . 
IA 31 PEE b 1 201 720 PEE PEE . 
JA 33 PLX g 1 201 705 PLX PLX . 
KA 30 CDL i 1 401 401 CDL CDL . 
LA 31 PEE i 1 402 718 PEE PEE . 
MA 31 PEE j 1 201 101 PEE PEE . 
NA 33 PLX j 1 202 202 PLX PLX . 
OA 33 PLX j 1 203 203 PLX PLX . 
PA 31 PEE l 1 701 207 PEE PEE . 
QA 30 CDL l 1 702 712 CDL CDL . 
RA 30 CDL l 1 703 713 CDL CDL . 
SA 31 PEE l 1 704 719 PEE PEE . 
TA 30 CDL m 1 201 101 CDL CDL . 
UA 33 PLX n 1 101 101 PLX PLX . 
VA 30 CDL n 1 102 102 CDL CDL . 
WA 31 PEE r 1 501 202 PEE PEE . 
XA 33 PLX r 1 502 201 PLX PLX . 
YA 30 CDL r 1 503 714 CDL CDL . 
ZA 31 PEE s 1 401 201 PEE PEE . 
AB 30 CDL s 1 402 201 CDL CDL . 
BB 31 PEE s 1 403 401 PEE PEE . 
CB 34 ADP w 1 401 401 ADP ADP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C27 PEE . . . SA 31 222.206 227.836 130.673 1 66.01 ? C27 PEE 704 l 1 
HETATM 2 C C26 PEE . . . SA 31 222.38 228.619 131.975 1 73.68 ? C26 PEE 704 l 1 
HETATM 3 C C25 PEE . . . SA 31 222.653 227.714 133.171 1 70.24 ? C25 PEE 704 l 1 
HETATM 4 C C24 PEE . . . SA 31 221.421 227.513 134.055 1 68.32 ? C24 PEE 704 l 1 
HETATM 5 C C23 PEE . . . SA 31 221.782 226.922 135.417 1 70.18 ? C23 PEE 704 l 1 
HETATM 6 C C22 PEE . . . SA 31 220.615 226.181 136.069 1 70.98 ? C22 PEE 704 l 1 
HETATM 7 C C21 PEE . . . SA 31 220.147 226.853 137.364 1 71.51 ? C21 PEE 704 l 1 
HETATM 8 C C20 PEE . . . SA 31 219.299 225.926 138.237 1 68.39 ? C20 PEE 704 l 1 
HETATM 9 C C19 PEE . . . SA 31 220.152 225.103 139.205 1 71.92 ? C19 PEE 704 l 1 
HETATM 10 C C18 PEE . . . SA 31 219.354 224.566 140.394 1 70.22 ? C18 PEE 704 l 1 
HETATM 11 C C17 PEE . . . SA 31 220.201 223.68 141.31 1 68.51 ? C17 PEE 704 l 1 
HETATM 12 C C16 PEE . . . SA 31 219.756 223.77 142.77 1 67.51 ? C16 PEE 704 l 1 
HETATM 13 C C15 PEE . . . SA 31 219.68 222.402 143.45 1 68.7 ? C15 PEE 704 l 1 
HETATM 14 C C14 PEE . . . SA 31 221.055 221.861 143.851 1 69.32 ? C14 PEE 704 l 1 
HETATM 15 C C13 PEE . . . SA 31 220.971 220.937 145.07 1 62.24 ? C13 PEE 704 l 1 
HETATM 16 C C12 PEE . . . SA 31 222.333 220.716 145.741 1 61.55 ? C12 PEE 704 l 1 
HETATM 17 C C11 PEE . . . SA 31 222.205 220.682 147.267 1 63.15 ? C11 PEE 704 l 1 
HETATM 18 C C10 PEE . . . SA 31 223.435 220.094 147.973 1 67.92 ? C10 PEE 704 l 1 
HETATM 19 O O4 PEE . . . SA 31 224.095 219.274 147.434 1 69.3 ? O4 PEE 704 l 1 
HETATM 20 O O2 PEE . . . SA 31 223.773 220.537 149.262 1 70.15 ? O2 PEE 704 l 1 
HETATM 21 C C2 PEE . . . SA 31 223.72 219.562 150.267 1 58.16 ? C2 PEE 704 l 1 
HETATM 22 C C1 PEE . . . SA 31 224.11 220.196 151.6 1 62.81 ? C1 PEE 704 l 1 
HETATM 23 O O3P PEE . . . SA 31 224.221 221.584 151.425 1 73.44 ? O3P PEE 704 l 1 
HETATM 24 P P PEE . . . SA 31 225.597 222.338 151.946 1 89.27 ? P PEE 704 l 1 
HETATM 25 O O2P PEE . . . SA 31 225.502 223.816 151.651 1 73.34 ? O2P PEE 704 l 1 
HETATM 26 O O1P PEE . . . SA 31 226.792 221.762 151.227 1 70.98 ? O1P PEE 704 l 1 
HETATM 27 O O4P PEE . . . SA 31 225.771 222.109 153.573 1 76.24 ? O4P PEE 704 l 1 
HETATM 28 C C4 PEE . . . SA 31 227.062 222.166 154.124 1 69.59 ? C4 PEE 704 l 1 
HETATM 29 C C5 PEE . . . SA 31 226.945 222.519 155.608 1 67.64 ? C5 PEE 704 l 1 
HETATM 30 N N PEE . . . SA 31 226.559 221.349 156.377 1 63.4 ? N PEE 704 l 1 
HETATM 31 C C3 PEE . . . SA 31 222.303 219.011 150.386 1 61.93 ? C3 PEE 704 l 1 
HETATM 32 O O3 PEE . . . SA 31 222.383 217.622 150.518 1 66.54 ? O3 PEE 704 l 1 
HETATM 33 C C30 PEE . . . SA 31 221.997 216.922 149.369 1 71 ? C30 PEE 704 l 1 
HETATM 34 O O5 PEE . . . SA 31 222.728 216.862 148.441 1 78.04 ? O5 PEE 704 l 1 
HETATM 35 C C31 PEE . . . SA 31 220.637 216.226 149.315 1 69.22 ? C31 PEE 704 l 1 
HETATM 36 C C32 PEE . . . SA 31 220.729 214.84 148.674 1 68.25 ? C32 PEE 704 l 1 
HETATM 37 C C33 PEE . . . SA 31 220.471 214.87 147.165 1 60.54 ? C33 PEE 704 l 1 
HETATM 38 C C34 PEE . . . SA 31 219.022 214.526 146.815 1 68.06 ? C34 PEE 704 l 1 
HETATM 39 C C35 PEE . . . SA 31 218.114 215.759 146.793 1 69.16 ? C35 PEE 704 l 1 
HETATM 40 C C36 PEE . . . SA 31 218.625 216.838 145.834 1 69.19 ? C36 PEE 704 l 1 
HETATM 41 C C37 PEE . . . SA 31 217.969 216.737 144.457 1 64.1 ? C37 PEE 704 l 1 
HETATM 42 C C38 PEE . . . SA 31 218.039 218.051 143.678 1 69.04 ? C38 PEE 704 l 1 
HETATM 43 C C39 PEE . . . SA 31 216.788 218.275 142.836 1 72.58 ? C39 PEE 704 l 1 
HETATM 44 C C40 PEE . . . SA 31 217.111 218.697 141.407 1 67.79 ? C40 PEE 704 l 1 
HETATM 45 C C41 PEE . . . SA 31 217.183 220.21 141.245 1 67.78 ? C41 PEE 704 l 1 
HETATM 46 C C42 PEE . . . SA 31 216.904 220.649 139.813 1 70.39 ? C42 PEE 704 l 1 
HETATM 47 C C43 PEE . . . SA 31 217.916 220.077 138.825 1 69.95 ? C43 PEE 704 l 1 
HETATM 48 C C44 PEE . . . SA 31 217.431 220.142 137.382 1 68.86 ? C44 PEE 704 l 1 
HETATM 49 C C45 PEE . . . SA 31 216.622 218.907 136.987 1 72.29 ? C45 PEE 704 l 1 
HETATM 50 C C46 PEE . . . SA 31 217.139 218.26 135.703 1 70.7 ? C46 PEE 704 l 1 
HETATM 51 C C47 PEE . . . SA 31 216.967 219.165 134.484 1 67.7 ? C47 PEE 704 l 1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    55 
_model_server_stats.query_time_ms           402 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           51 
#