data_7VY1
#
_model_server_result.job_id            zKUAIDPOv4BDK2VC0njX0Q 
_model_server_result.datetime_utc      '2024-12-21 16:58:21' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7vy1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"QA","auth_seq_id":701}' 
#
_entry.id    7VY1 
#
_exptl.entry_id    7VY1 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              744.034 
_entity.id                          30 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-dioleoyl-sn-glycero-3-phosphoethanolamine 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7VY1 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7VY1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    29-meric 
_pdbx_struct_assembly.oligomeric_count      29 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 30 DA N N 
? 30 FA N N 
? 30 JA N N 
? 30 NA N N 
? 30 OA N N 
? 30 QA N N 
? 30 SA N N 
? 30 UA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 D SG CYS 95 V CYS 95 1_555 D SG CYS 115 V CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf2 L SG CYS 113 d CYS 113 1_555 L SG CYS 125 d CYS 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf3 P SG CYS 33 h CYS 33 1_555 P SG CYS 66 h CYS 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf4 P SG CYS 43 h CYS 43 1_555 P SG CYS 56 h CYS 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf5 AA SG CYS 88 u CYS 88 1_555 AA SG CYS 100 u CYS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf6 BA SG CYS 68 v CYS 69 1_555 BA SG CYS 79 v CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
#
_chem_comp.formula           'C41 H78 N O8 P' 
_chem_comp.formula_weight    744.034 
_chem_comp.id                PEE 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              1,2-dioleoyl-sn-glycero-3-phosphoethanolamine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     DOPE 
#
_atom_sites.entry_id                     7VY1 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
DA 30 PEE U 1 401 401 PEE PEE . 
EA 31 CDL V 1 201 201 CDL CDL . 
FA 30 PEE W 1 201 202 PEE PEE . 
GA 32 8Q1 X 1 201 201 8Q1 8Q1 . 
HA 31 CDL a 1 201 201 CDL CDL . 
IA 33 PLX a 1 202 101 PLX PLX . 
JA 30 PEE b 1 201 720 PEE PEE . 
KA 33 PLX g 1 201 705 PLX PLX . 
LA 31 CDL g 1 202 714 CDL CDL . 
MA 31 CDL i 1 401 401 CDL CDL . 
NA 30 PEE i 1 402 718 PEE PEE . 
OA 30 PEE j 1 201 101 PEE PEE . 
PA 33 PLX j 1 202 203 PLX PLX . 
QA 30 PEE l 1 701 207 PEE PEE . 
RA 31 CDL l 1 702 713 CDL CDL . 
SA 30 PEE l 1 703 719 PEE PEE . 
TA 31 CDL o 1 201 203 CDL CDL . 
UA 30 PEE r 1 501 202 PEE PEE . 
VA 33 PLX r 1 502 205 PLX PLX . 
WA 33 PLX r 1 503 201 PLX PLX . 
XA 31 CDL r 1 504 712 CDL CDL . 
YA 34 UQ s 1 401 403 UQ UQ . 
ZA 31 CDL u 1 201 102 CDL CDL . 
AB 35 ADP w 1 401 401 ADP ADP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C21 PEE . . . QA 30 180.477 187.044 137.952 1 108.59 ? C21 PEE 701 l 1 
HETATM 2 C C20 PEE . . . QA 30 180.425 188.16 138.997 1 109.98 ? C20 PEE 701 l 1 
HETATM 3 C C19 PEE . . . QA 30 180.654 189.54 138.38 1 109.13 ? C19 PEE 701 l 1 
HETATM 4 C C18 PEE . . . QA 30 180.459 190.67 139.391 1 108.25 ? C18 PEE 701 l 1 
HETATM 5 C C17 PEE . . . QA 30 181.53 190.668 140.484 1 107.11 ? C17 PEE 701 l 1 
HETATM 6 C C16 PEE . . . QA 30 181.208 191.653 141.608 1 107.39 ? C16 PEE 701 l 1 
HETATM 7 C C15 PEE . . . QA 30 181.873 191.261 142.927 1 106.98 ? C15 PEE 701 l 1 
HETATM 8 C C14 PEE . . . QA 30 181.626 192.289 144.034 1 107.73 ? C14 PEE 701 l 1 
HETATM 9 C C13 PEE . . . QA 30 181.54 191.638 145.418 1 105.75 ? C13 PEE 701 l 1 
HETATM 10 C C12 PEE . . . QA 30 181.691 192.653 146.559 1 106.94 ? C12 PEE 701 l 1 
HETATM 11 C C11 PEE . . . QA 30 181.106 194.028 146.214 1 109.63 ? C11 PEE 701 l 1 
HETATM 12 C C10 PEE . . . QA 30 180.625 194.784 147.46 1 111.47 ? C10 PEE 701 l 1 
HETATM 13 O O4 PEE . . . QA 30 179.466 194.86 147.681 1 109.02 ? O4 PEE 701 l 1 
HETATM 14 O O2 PEE . . . QA 30 181.554 195.376 148.333 1 116.88 ? O2 PEE 701 l 1 
HETATM 15 C C2 PEE . . . QA 30 181.239 196.69 148.714 1 115.6 ? C2 PEE 701 l 1 
HETATM 16 C C1 PEE . . . QA 30 180.534 196.673 150.069 1 112 ? C1 PEE 701 l 1 
HETATM 17 O O3P PEE . . . QA 30 180.612 195.372 150.59 1 115.93 ? O3P PEE 701 l 1 
HETATM 18 P P PEE . . . QA 30 179.242 194.685 151.212 1 128.18 ? P PEE 701 l 1 
HETATM 19 O O2P PEE . . . QA 30 179.605 193.854 152.42 1 114.5 ? O2P PEE 701 l 1 
HETATM 20 O O1P PEE . . . QA 30 178.599 193.8 150.172 1 114.87 ? O1P PEE 701 l 1 
HETATM 21 O O4P PEE . . . QA 30 178.185 195.877 151.657 1 115.54 ? O4P PEE 701 l 1 
HETATM 22 C C4 PEE . . . QA 30 177.053 196.11 150.857 1 111.41 ? C4 PEE 701 l 1 
HETATM 23 C C5 PEE . . . QA 30 176.326 197.337 151.409 1 112.23 ? C5 PEE 701 l 1 
HETATM 24 N N PEE . . . QA 30 177.132 198.529 151.215 1 108.82 ? N PEE 701 l 1 
HETATM 25 C C3 PEE . . . QA 30 182.508 197.53 148.84 1 112.18 ? C3 PEE 701 l 1 
HETATM 26 O O3 PEE . . . QA 30 183.5 197.004 148.005 1 113.17 ? O3 PEE 701 l 1 
HETATM 27 C C30 PEE . . . QA 30 183.598 197.652 146.769 1 110.34 ? C30 PEE 701 l 1 
HETATM 28 O O5 PEE . . . QA 30 183.774 198.822 146.725 1 109.15 ? O5 PEE 701 l 1 
HETATM 29 C C31 PEE . . . QA 30 183.475 196.848 145.474 1 108.9 ? C31 PEE 701 l 1 
HETATM 30 C C32 PEE . . . QA 30 184.824 196.517 144.835 1 109.24 ? C32 PEE 701 l 1 
HETATM 31 C C33 PEE . . . QA 30 184.711 196.425 143.31 1 109.81 ? C33 PEE 701 l 1 
HETATM 32 C C34 PEE . . . QA 30 183.555 195.531 142.853 1 108.92 ? C34 PEE 701 l 1 
HETATM 33 C C35 PEE . . . QA 30 182.688 196.201 141.78 1 106.96 ? C35 PEE 701 l 1 
HETATM 34 C C36 PEE . . . QA 30 182.159 195.203 140.746 1 107.25 ? C36 PEE 701 l 1 
HETATM 35 C C37 PEE . . . QA 30 180.958 195.754 139.974 1 107.55 ? C37 PEE 701 l 1 
HETATM 36 C C38 PEE . . . QA 30 181.191 195.773 138.464 1 109.2 ? C38 PEE 701 l 1 
HETATM 37 C C39 PEE . . . QA 30 180.844 194.446 137.799 1 110.7 ? C39 PEE 701 l 1 
HETATM 38 C C40 PEE . . . QA 30 181.584 194.252 136.48 1 109.04 ? C40 PEE 701 l 1 
HETATM 39 C C41 PEE . . . QA 30 181.252 192.92 135.819 1 109.32 ? C41 PEE 701 l 1 
HETATM 40 C C42 PEE . . . QA 30 182.381 192.424 134.924 1 107.89 ? C42 PEE 701 l 1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    63 
_model_server_stats.query_time_ms           286 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           40 
#