data_7VYE
#
_model_server_result.job_id            ie3WQBCGuHTF7oktPhhPcA 
_model_server_result.datetime_utc      '2024-12-21 16:55:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7vye 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"KA","auth_seq_id":201}' 
#
_entry.id    7VYE 
#
_exptl.entry_id    7VYE 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              767.132 
_entity.id                          33 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7VYE 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7VYE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    29-meric 
_pdbx_struct_assembly.oligomeric_count      29 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 33 IA N N 
? 33 KA N N 
? 33 OA N N 
? 33 UA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 L SG CYS 112 d CYS 113 1_555 L SG CYS 124 d CYS 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf2 P SG CYS 32 h CYS 33 1_555 P SG CYS 65 h CYS 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf3 P SG CYS 42 h CYS 43 1_555 P SG CYS 55 h CYS 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf4 AA SG CYS 77 u CYS 78 1_555 AA SG CYS 109 u CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.511 ? 
disulf ? disulf5 BA SG CYS 69 v CYS 69 1_555 BA SG CYS 80 v CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
#
_chem_comp.formula           'C42 H89 N O8 P 1' 
_chem_comp.formula_weight    767.132 
_chem_comp.id                PLX 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     7VYE 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
DA 30 PEE U 1 101 101 PEE PEE . 
EA 30 PEE V 1 201 207 PEE PEE . 
FA 31 CDL V 1 202 201 CDL CDL . 
GA 32 8Q1 X 1 201 201 8Q1 8Q1 . 
HA 31 CDL a 1 201 201 CDL CDL . 
IA 33 PLX a 1 202 101 PLX PLX . 
JA 30 PEE b 1 201 720 PEE PEE . 
KA 33 PLX g 1 201 705 PLX PLX . 
LA 31 CDL g 1 202 714 CDL CDL . 
MA 31 CDL i 1 401 401 CDL CDL . 
NA 30 PEE i 1 402 718 PEE PEE . 
OA 33 PLX j 1 201 203 PLX PLX . 
PA 31 CDL l 1 701 712 CDL CDL . 
QA 31 CDL l 1 702 713 CDL CDL . 
RA 30 PEE l 1 703 719 PEE PEE . 
SA 31 CDL o 1 201 203 CDL CDL . 
TA 30 PEE r 1 501 202 PEE PEE . 
UA 33 PLX r 1 502 201 PLX PLX . 
VA 30 PEE s 1 401 202 PEE PEE . 
WA 30 PEE s 1 402 401 PEE PEE . 
XA 34 UQ s 1 403 403 UQ UQ . 
YA 31 CDL u 1 201 102 CDL CDL . 
ZA 35 ADP w 1 401 401 ADP ADP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C23 PLX . . . KA 33 178.732 138.164 117.728 1 27.67 ? C23 PLX 201 g 1 
HETATM 2 C C22 PLX . . . KA 33 178.079 137.842 116.353 1 27.67 ? C22 PLX 201 g 1 
HETATM 3 C C21 PLX . . . KA 33 176.976 136.745 116.476 1 27.67 ? C21 PLX 201 g 1 
HETATM 4 C C20 PLX . . . KA 33 177.55 135.413 117.056 1 27.67 ? C20 PLX 201 g 1 
HETATM 5 C C19 PLX . . . KA 33 176.443 134.331 117.286 1 27.67 ? C19 PLX 201 g 1 
HETATM 6 C C18 PLX . . . KA 33 177.064 132.944 117.696 1 27.67 ? C18 PLX 201 g 1 
HETATM 7 C C17 PLX . . . KA 33 178.082 132.395 116.617 1 27.67 ? C17 PLX 201 g 1 
HETATM 8 C C16 PLX . . . KA 33 178.109 130.827 116.573 1 27.67 ? C16 PLX 201 g 1 
HETATM 9 C C15 PLX . . . KA 33 176.852 130.215 115.844 1 27.67 ? C15 PLX 201 g 1 
HETATM 10 C C14 PLX . . . KA 33 177.018 128.679 115.581 1 27.67 ? C14 PLX 201 g 1 
HETATM 11 C C13 PLX . . . KA 33 176.424 128.229 114.193 1 27.67 ? C13 PLX 201 g 1 
HETATM 12 C C12 PLX . . . KA 33 174.957 128.727 113.962 1 27.67 ? C12 PLX 201 g 1 
HETATM 13 C C11 PLX . . . KA 33 174.42 128.354 112.539 1 27.67 ? C11 PLX 201 g 1 
HETATM 14 C C10 PLX . . . KA 33 173.563 127.048 112.553 1 27.67 ? C10 PLX 201 g 1 
HETATM 15 C C9 PLX . . . KA 33 173.968 126.042 111.413 1 27.67 ? C9 PLX 201 g 1 
HETATM 16 C C8 PLX . . . KA 33 172.765 125.685 110.459 1 27.67 ? C8 PLX 201 g 1 
HETATM 17 C C7 PLX . . . KA 33 171.62 126.771 110.498 1 27.67 ? C7 PLX 201 g 1 
HETATM 18 C C6 PLX . . . KA 33 170.844 126.864 109.157 1 27.67 ? C6 PLX 201 g 1 
HETATM 19 O O7 PLX . . . KA 33 169.836 125.927 109.148 1 27.67 ? O7 PLX 201 g 1 
HETATM 20 O O6 PLX . . . KA 33 170.288 128.162 109.015 1 27.67 ? O6 PLX 201 g 1 
HETATM 21 C C4 PLX . . . KA 33 170.584 128.777 107.787 1 27.67 ? C4 PLX 201 g 1 
HETATM 22 C C3 PLX . . . KA 33 169.339 128.75 106.895 1 27.67 ? C3 PLX 201 g 1 
HETATM 23 O O4 PLX . . . KA 33 168.557 129.898 107.229 1 27.67 ? O4 PLX 201 g 1 
HETATM 24 P P1 PLX . . . KA 33 167.141 130.166 106.386 1 27.67 ? P1 PLX 201 g 1 
HETATM 25 O O1 PLX . . . KA 33 166.741 131.779 106.483 1 27.67 ? O1 PLX 201 g 1 
HETATM 26 C C2 PLX . . . KA 33 166.33 132.279 107.756 1 27.67 ? C2 PLX 201 g 1 
HETATM 27 C C1 PLX . . . KA 33 166.758 133.782 107.859 1 27.67 ? C1 PLX 201 g 1 
HETATM 28 N N1 PLX . . . KA 33 165.791 134.663 107.124 1 27.67 ? N1 PLX 201 g 1 
HETATM 29 C C1C PLX . . . KA 33 164.441 134.336 107.621 1 27.67 ? C1C PLX 201 g 1 
HETATM 30 C C1B PLX . . . KA 33 166.161 136.067 107.47 1 27.67 ? C1B PLX 201 g 1 
HETATM 31 C C1A PLX . . . KA 33 165.718 134.606 105.644 1 27.67 ? C1A PLX 201 g 1 
HETATM 32 O O2 PLX . . . KA 33 166.023 129.374 107.019 1 27.67 ? O2 PLX 201 g 1 
HETATM 33 C C5 PLX . . . KA 33 170.962 130.248 108.027 1 27.67 ? C5 PLX 201 g 1 
HETATM 34 O O8 PLX . . . KA 33 172.283 130.307 108.558 1 27.67 ? O8 PLX 201 g 1 
HETATM 35 C C24 PLX . . . KA 33 172.398 131.214 109.631 1 27.67 ? C24 PLX 201 g 1 
HETATM 36 O O9 PLX . . . KA 33 171.395 132.168 109.537 1 27.67 ? O9 PLX 201 g 1 
HETATM 37 C C25 PLX . . . KA 33 173.774 131.909 109.597 1 27.67 ? C25 PLX 201 g 1 
HETATM 38 C C26 PLX . . . KA 33 174.325 132.127 111.04 1 27.67 ? C26 PLX 201 g 1 
HETATM 39 C C27 PLX . . . KA 33 175.753 132.749 111.053 1 27.67 ? C27 PLX 201 g 1 
HETATM 40 C C28 PLX . . . KA 33 175.859 133.96 112.038 1 27.67 ? C28 PLX 201 g 1 
HETATM 41 C C29 PLX . . . KA 33 177.243 134.68 111.946 1 27.67 ? C29 PLX 201 g 1 
HETATM 42 C C30 PLX . . . KA 33 177.132 136.104 111.286 1 27.67 ? C30 PLX 201 g 1 
HETATM 43 C C31 PLX . . . KA 33 177.243 137.25 112.357 1 27.67 ? C31 PLX 201 g 1 
HETATM 44 C C32 PLX . . . KA 33 177.654 138.631 111.717 1 27.67 ? C32 PLX 201 g 1 
HETATM 45 C C33 PLX . . . KA 33 179.215 138.744 111.507 1 27.67 ? C33 PLX 201 g 1 
HETATM 46 C C34 PLX . . . KA 33 179.987 138.949 112.868 1 27.67 ? C34 PLX 201 g 1 
HETATM 47 C C35 PLX . . . KA 33 181.353 138.149 112.89 1 27.67 ? C35 PLX 201 g 1 
HETATM 48 C C36 PLX . . . KA 33 181.29 136.876 113.804 1 27.67 ? C36 PLX 201 g 1 
HETATM 49 C C37 PLX . . . KA 33 182.466 135.879 113.506 1 27.67 ? C37 PLX 201 g 1 
HETATM 50 C C38 PLX . . . KA 33 182.607 134.784 114.609 1 27.67 ? C38 PLX 201 g 1 
HETATM 51 C C39 PLX . . . KA 33 181.248 134.123 114.941 1 27.67 ? C39 PLX 201 g 1 
HETATM 52 O O3 PLX . . . KA 33 167.331 129.767 104.94 1 27.67 ? O3 PLX 201 g 1 
#
_model_server_stats.io_time_ms              25 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    107 
_model_server_stats.query_time_ms           518 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           52 
#