data_7W01
#
_model_server_result.job_id            6NFWps26kf29dkCBt9Gd2g 
_model_server_result.datetime_utc      '2025-06-20 01:59:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7w01 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1803}' 
#
_entry.id    7W01 
#
_exptl.entry_id    7W01 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              678.94 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7W01 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7W01 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 1295 A CYS 1274 1_555 A SG CYS 1305 A CYS 1284 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
covale ? covale1 A ND2 ASN 145 A ASN 124 1_555 B C1 NAG . A NAG 1801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? 
covale ? covale2 A ND2 ASN 161 A ASN 140 1_555 C C1 NAG . A NAG 1802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? 
#
_chem_comp.formula           'C36 H73 N O8 P 1' 
_chem_comp.formula_weight    678.94 
_chem_comp.id                PX4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 P1 PX4 sing 438 n n 
O1 H1P PX4 sing 439 n n 
O2 P1 PX4 doub 440 n n 
P1 O3 PX4 sing 441 n n 
P1 O4 PX4 sing 442 n n 
O3 C1 PX4 sing 443 n n 
C1 C2 PX4 sing 444 n n 
C1 H1 PX4 sing 445 n n 
C1 H2 PX4 sing 446 n n 
C2 N1 PX4 sing 447 n n 
C2 H3 PX4 sing 448 n n 
C2 H4 PX4 sing 449 n n 
N1 C3 PX4 sing 450 n n 
N1 C4 PX4 sing 451 n n 
N1 C5 PX4 sing 452 n n 
C3 H5 PX4 sing 453 n n 
C3 H6 PX4 sing 454 n n 
C3 H7 PX4 sing 455 n n 
C4 H8 PX4 sing 456 n n 
C4 H9 PX4 sing 457 n n 
C4 H10 PX4 sing 458 n n 
C5 H11 PX4 sing 459 n n 
C5 H12 PX4 sing 460 n n 
C5 H13 PX4 sing 461 n n 
O4 C6 PX4 sing 462 n n 
C6 C7 PX4 sing 463 n n 
C6 H14 PX4 sing 464 n n 
C6 H15 PX4 sing 465 n n 
C7 C8 PX4 sing 466 n n 
C7 O7 PX4 sing 467 n n 
C7 H16 PX4 sing 468 n n 
C8 O5 PX4 sing 469 n n 
C8 H17 PX4 sing 470 n n 
C8 H18 PX4 sing 471 n n 
O5 C9 PX4 sing 472 n n 
C9 O6 PX4 doub 473 n n 
C9 C10 PX4 sing 474 n n 
C10 C11 PX4 sing 475 n n 
C10 H19 PX4 sing 476 n n 
C10 H20 PX4 sing 477 n n 
C11 C12 PX4 sing 478 n n 
C11 H21 PX4 sing 479 n n 
C11 H22 PX4 sing 480 n n 
C12 C13 PX4 sing 481 n n 
C12 H23 PX4 sing 482 n n 
C12 H24 PX4 sing 483 n n 
C13 C14 PX4 sing 484 n n 
C13 H25 PX4 sing 485 n n 
C13 H26 PX4 sing 486 n n 
C14 C15 PX4 sing 487 n n 
C14 H27 PX4 sing 488 n n 
C14 H28 PX4 sing 489 n n 
C15 C16 PX4 sing 490 n n 
C15 H29 PX4 sing 491 n n 
C15 H30 PX4 sing 492 n n 
C16 C17 PX4 sing 493 n n 
C16 H31 PX4 sing 494 n n 
C16 H32 PX4 sing 495 n n 
C17 C18 PX4 sing 496 n n 
C17 H33 PX4 sing 497 n n 
C17 H34 PX4 sing 498 n n 
C18 C19 PX4 sing 499 n n 
C18 H35 PX4 sing 500 n n 
C18 H36 PX4 sing 501 n n 
C19 C20 PX4 sing 502 n n 
C19 H37 PX4 sing 503 n n 
C19 H38 PX4 sing 504 n n 
C20 C21 PX4 sing 505 n n 
C20 H39 PX4 sing 506 n n 
C20 H40 PX4 sing 507 n n 
C21 C22 PX4 sing 508 n n 
C21 H41 PX4 sing 509 n n 
C21 H42 PX4 sing 510 n n 
C22 H43 PX4 sing 511 n n 
C22 H44 PX4 sing 512 n n 
C22 H45 PX4 sing 513 n n 
O7 C23 PX4 sing 514 n n 
C23 O8 PX4 doub 515 n n 
C23 C24 PX4 sing 516 n n 
C24 C25 PX4 sing 517 n n 
C24 H46 PX4 sing 518 n n 
C24 H47 PX4 sing 519 n n 
C25 C26 PX4 sing 520 n n 
C25 H48 PX4 sing 521 n n 
C25 H49 PX4 sing 522 n n 
C26 C27 PX4 sing 523 n n 
C26 H50 PX4 sing 524 n n 
C26 H51 PX4 sing 525 n n 
C27 C28 PX4 sing 526 n n 
C27 H52 PX4 sing 527 n n 
C27 H53 PX4 sing 528 n n 
C28 C29 PX4 sing 529 n n 
C28 H54 PX4 sing 530 n n 
C28 H55 PX4 sing 531 n n 
C29 C30 PX4 sing 532 n n 
C29 H56 PX4 sing 533 n n 
C29 H57 PX4 sing 534 n n 
C30 C31 PX4 sing 535 n n 
C30 H58 PX4 sing 536 n n 
C30 H59 PX4 sing 537 n n 
C31 C32 PX4 sing 538 n n 
C31 H60 PX4 sing 539 n n 
C31 H61 PX4 sing 540 n n 
C32 C33 PX4 sing 541 n n 
C32 H62 PX4 sing 542 n n 
C32 H63 PX4 sing 543 n n 
C33 C34 PX4 sing 544 n n 
C33 H64 PX4 sing 545 n n 
C33 H65 PX4 sing 546 n n 
C34 C35 PX4 sing 547 n n 
C34 H66 PX4 sing 548 n n 
C34 H67 PX4 sing 549 n n 
C35 C36 PX4 sing 550 n n 
C35 H68 PX4 sing 551 n n 
C35 H69 PX4 sing 552 n n 
C36 H70 PX4 sing 553 n n 
C36 H71 PX4 sing 554 n n 
C36 H72 PX4 sing 555 n n 
#
_atom_sites.entry_id                     7W01 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NAG A 1 1801 1 NAG NAG . 
C 2 NAG A 1 1802 2 NAG NAG . 
D 3 PX4 A 1 1803 1 PX4 PX4 . 
E 3 PX4 A 1 1804 2 PX4 PX4 . 
F 4 POV A 1 1805 1 POV POV . 
G 4 POV A 1 1806 2 POV POV . 
H 4 POV A 1 1807 3 POV POV . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 PX4 . . . D 3 130.079 131.436 144.02 1 20 ? O1 PX4 1803 A 1 
HETATM 2 O O2 PX4 . . . D 3 127.991 131.145 142.515 1 20 ? O2 PX4 1803 A 1 
HETATM 3 P P1 PX4 . . . D 3 128.788 130.72 143.719 1 20 ? P1 PX4 1803 A 1 
HETATM 4 O O3 PX4 . . . D 3 127.853 130.779 145.03 1 20 ? O3 PX4 1803 A 1 
HETATM 5 C C1 PX4 . . . D 3 127.351 129.592 145.651 1 20 ? C1 PX4 1803 A 1 
HETATM 6 C C2 PX4 . . . D 3 125.828 129.665 145.742 1 20 ? C2 PX4 1803 A 1 
HETATM 7 N N1 PX4 . . . D 3 125.328 128.926 146.913 1 20 ? N1 PX4 1803 A 1 
HETATM 8 C C3 PX4 . . . D 3 125.657 129.661 148.139 1 20 ? C3 PX4 1803 A 1 
HETATM 9 C C4 PX4 . . . D 3 123.869 128.778 146.835 1 20 ? C4 PX4 1803 A 1 
HETATM 10 C C5 PX4 . . . D 3 125.948 127.597 146.948 1 20 ? C5 PX4 1803 A 1 
HETATM 11 O O4 PX4 . . . D 3 129.092 129.147 143.59 1 20 ? O4 PX4 1803 A 1 
HETATM 12 C C6 PX4 . . . D 3 128.861 128.457 142.367 1 20 ? C6 PX4 1803 A 1 
HETATM 13 C C7 PX4 . . . D 3 128.618 126.987 142.672 1 20 ? C7 PX4 1803 A 1 
HETATM 14 C C8 PX4 . . . D 3 127.198 126.811 143.189 1 20 ? C8 PX4 1803 A 1 
HETATM 15 O O5 PX4 . . . D 3 126.819 125.443 143.069 1 20 ? O5 PX4 1803 A 1 
HETATM 16 C C9 PX4 . . . D 3 126.166 124.965 141.862 1 20 ? C9 PX4 1803 A 1 
HETATM 17 O O6 PX4 . . . D 3 126.44 125.473 140.79 1 20 ? O6 PX4 1803 A 1 
HETATM 18 C C10 PX4 . . . D 3 125.158 123.846 141.942 1 20 ? C10 PX4 1803 A 1 
HETATM 19 C C11 PX4 . . . D 3 125.082 123.149 140.592 1 20 ? C11 PX4 1803 A 1 
HETATM 20 C C12 PX4 . . . D 3 124.495 124.075 139.536 1 20 ? C12 PX4 1803 A 1 
HETATM 21 C C13 PX4 . . . D 3 123.802 123.274 138.442 1 20 ? C13 PX4 1803 A 1 
HETATM 22 C C14 PX4 . . . D 3 122.606 122.512 138.998 1 20 ? C14 PX4 1803 A 1 
HETATM 23 C C15 PX4 . . . D 3 121.307 123.229 138.652 1 20 ? C15 PX4 1803 A 1 
HETATM 24 C C16 PX4 . . . D 3 120.146 122.246 138.585 1 20 ? C16 PX4 1803 A 1 
HETATM 25 C C17 PX4 . . . D 3 118.912 122.902 137.981 1 20 ? C17 PX4 1803 A 1 
HETATM 26 C C18 PX4 . . . D 3 118.924 122.783 136.462 1 20 ? C18 PX4 1803 A 1 
HETATM 27 C C19 PX4 . . . D 3 118.905 121.325 136.021 1 20 ? C19 PX4 1803 A 1 
HETATM 28 C C20 PX4 . . . D 3 117.793 121.078 135.009 1 20 ? C20 PX4 1803 A 1 
HETATM 29 C C21 PX4 . . . D 3 117.881 119.681 134.406 1 20 ? C21 PX4 1803 A 1 
HETATM 30 C C22 PX4 . . . D 3 118.992 118.875 135.043 1 20 ? C22 PX4 1803 A 1 
HETATM 31 O O7 PX4 . . . D 3 128.781 126.22 141.484 1 20 ? O7 PX4 1803 A 1 
HETATM 32 C C23 PX4 . . . D 3 130.063 126.457 140.846 1 20 ? C23 PX4 1803 A 1 
HETATM 33 O O8 PX4 . . . D 3 130.986 126.894 141.51 1 20 ? O8 PX4 1803 A 1 
HETATM 34 C C24 PX4 . . . D 3 130.239 126.165 139.376 1 20 ? C24 PX4 1803 A 1 
HETATM 35 C C25 PX4 . . . D 3 131.128 124.941 139.198 1 20 ? C25 PX4 1803 A 1 
HETATM 36 C C26 PX4 . . . D 3 132.452 125.318 138.545 1 20 ? C26 PX4 1803 A 1 
HETATM 37 C C27 PX4 . . . D 3 132.557 124.737 137.14 1 20 ? C27 PX4 1803 A 1 
HETATM 38 C C28 PX4 . . . D 3 132.704 123.223 137.185 1 20 ? C28 PX4 1803 A 1 
HETATM 39 C C29 PX4 . . . D 3 133.882 122.763 136.337 1 20 ? C29 PX4 1803 A 1 
HETATM 40 C C30 PX4 . . . D 3 134.721 121.737 137.087 1 20 ? C30 PX4 1803 A 1 
HETATM 41 C C31 PX4 . . . D 3 134.907 120.474 136.258 1 20 ? C31 PX4 1803 A 1 
HETATM 42 C C32 PX4 . . . D 3 133.846 120.379 135.169 1 20 ? C32 PX4 1803 A 1 
HETATM 43 C C33 PX4 . . . D 3 133.002 119.123 135.34 1 20 ? C33 PX4 1803 A 1 
HETATM 44 C C34 PX4 . . . D 3 133.637 117.949 134.609 1 20 ? C34 PX4 1803 A 1 
HETATM 45 C C35 PX4 . . . D 3 134.281 118.41 133.307 1 20 ? C35 PX4 1803 A 1 
HETATM 46 C C36 PX4 . . . D 3 133.691 117.68 132.12 1 20 ? C36 PX4 1803 A 1 
#
_model_server_stats.io_time_ms              71 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           449 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           46 
#