data_7W11 # _model_server_result.job_id hN4PZRCZiBK0HrK97BTSmg _model_server_result.datetime_utc '2025-02-17 23:58:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7w11 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 7W11 # _exptl.entry_id 7W11 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.156 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description alpha-D-glucopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.194 _cell.angle_gamma 90 _cell.entry_id 7W11 _cell.length_a 50.753 _cell.length_b 76.533 _cell.length_c 63.21 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7W11 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id C _struct_conn.ptnr1_label_atom_id C1 _struct_conn.ptnr1_label_comp_id GLC _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id GLC _struct_conn.ptnr1_auth_seq_id 502 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id D _struct_conn.ptnr2_label_atom_id O32 _struct_conn.ptnr2_label_comp_id DTX _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id DTX _struct_conn.ptnr2_auth_seq_id 503 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.417 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C6 H12 O6' _chem_comp.formula_weight 180.156 _chem_comp.id GLC _chem_comp.mon_nstd_flag . _chem_comp.name alpha-D-glucopyranose _chem_comp.type 'd-saccharide, alpha linking' _chem_comp.pdbx_synonyms alpha-D-glucose;D-glucose;glucose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 GLC sing 148 n n C1 O1 GLC sing 149 n n C1 O5 GLC sing 150 n n C1 H1 GLC sing 151 n n C2 C3 GLC sing 152 n n C2 O2 GLC sing 153 n n C2 H2 GLC sing 154 n n C3 C4 GLC sing 155 n n C3 O3 GLC sing 156 n n C3 H3 GLC sing 157 n n C4 C5 GLC sing 158 n n C4 O4 GLC sing 159 n n C4 H4 GLC sing 160 n n C5 C6 GLC sing 161 n n C5 O5 GLC sing 162 n n C5 H5 GLC sing 163 n n C6 O6 GLC sing 164 n n C6 H61 GLC sing 165 n n C6 H62 GLC sing 166 n n O1 HO1 GLC sing 167 n n O2 HO2 GLC sing 168 n n O3 HO3 GLC sing 169 n n O4 HO4 GLC sing 170 n n O6 HO6 GLC sing 171 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version GLC DGlcpa 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 GLC a-D-glucopyranose 'COMMON NAME' GMML 1 GLC a-D-Glcp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 GLC Glc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 7W11 _atom_sites.fract_transf_matrix[1][1] 0.019703 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002487 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013066 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015946 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 UDP A 1 501 502 UDP UDP . C 3 GLC A 1 502 503 GLC D3G . D 4 DTX A 1 503 503 DTX D3G . E 5 HOH A 1 601 3 HOH HOH . E 5 HOH A 2 602 2 HOH HOH . E 5 HOH A 3 603 1 HOH HOH . E 5 HOH A 4 604 86 HOH HOH . E 5 HOH A 5 605 15 HOH HOH . E 5 HOH A 6 606 85 HOH HOH . E 5 HOH A 7 607 92 HOH HOH . E 5 HOH A 8 608 70 HOH HOH . E 5 HOH A 9 609 17 HOH HOH . E 5 HOH A 10 610 94 HOH HOH . E 5 HOH A 11 611 71 HOH HOH . E 5 HOH A 12 612 93 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GLC . . . C 3 -12.037 -6.333 -13.148 1 28.54 ? C1 GLC 502 A 1 HETATM 2 C C2 GLC . . . C 3 -12.663 -6.433 -14.501 1 32.93 ? C2 GLC 502 A 1 HETATM 3 C C3 GLC . . . C 3 -13.991 -7.203 -14.462 1 29.24 ? C3 GLC 502 A 1 HETATM 4 C C4 GLC . . . C 3 -13.869 -8.385 -13.575 1 28.69 ? C4 GLC 502 A 1 HETATM 5 C C5 GLC . . . C 3 -13.623 -7.899 -12.145 1 29.62 ? C5 GLC 502 A 1 HETATM 6 C C6 GLC . . . C 3 -12.907 -8.955 -11.317 1 28.57 ? C6 GLC 502 A 1 HETATM 7 O O2 GLC . . . C 3 -12.917 -5.172 -15.125 1 28.06 ? O2 GLC 502 A 1 HETATM 8 O O3 GLC . . . C 3 -14.321 -7.61 -15.787 1 29.74 ? O3 GLC 502 A 1 HETATM 9 O O4 GLC . . . C 3 -15.04 -9.189 -13.538 1 25.59 ? O4 GLC 502 A 1 HETATM 10 O O5 GLC . . . C 3 -12.889 -6.668 -12.079 1 33.88 ? O5 GLC 502 A 1 HETATM 11 O O6 GLC . . . C 3 -13.611 -9.199 -10.118 1 31.8 ? O6 GLC 502 A 1 HETATM 12 H H1 GLC . . . C 3 -11.273 -6.966 -13.149 1 34.37 ? H1 GLC 502 A 1 HETATM 13 H H2 GLC . . . C 3 -11.982 -6.918 -15.025 1 39.64 ? H2 GLC 502 A 1 HETATM 14 H H3 GLC . . . C 3 -14.709 -6.616 -14.113 1 35.21 ? H3 GLC 502 A 1 HETATM 15 H H4 GLC . . . C 3 -13.132 -8.938 -13.927 1 34.55 ? H4 GLC 502 A 1 HETATM 16 H H5 GLC . . . C 3 -14.496 -7.673 -11.741 1 35.67 ? H5 GLC 502 A 1 HETATM 17 H H61 GLC . . . C 3 -11.999 -8.649 -11.108 1 34.4 ? H61 GLC 502 A 1 HETATM 18 H H62 GLC . . . C 3 -12.838 -9.786 -11.832 1 34.4 ? H62 GLC 502 A 1 HETATM 19 H HO2 GLC . . . C 3 -13.399 -5.292 -15.803 1 33.8 ? HO2 GLC 502 A 1 HETATM 20 H HO3 GLC . . . C 3 -14.932 -8.186 -15.75 1 35.81 ? HO3 GLC 502 A 1 HETATM 21 H HO4 GLC . . . C 3 -14.833 -9.979 -13.334 1 30.84 ? HO4 GLC 502 A 1 HETATM 22 H HO6 GLC . . . C 3 -13.63 -8.491 -9.651 1 38.29 ? HO6 GLC 502 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 22 #