data_7W1A # _model_server_result.job_id KJvD6lGib2c6hXYq6FnAPg _model_server_result.datetime_utc '2024-10-19 13:36:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7w1a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":402}' # _entry.id 7W1A # _exptl.entry_id 7W1A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 748.984 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description AZITHROMYCIN _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.71 _cell.angle_gamma 90 _cell.entry_id 7W1A _cell.length_a 81.014 _cell.length_b 45.852 _cell.length_c 89.677 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7W1A _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C38 H72 N2 O12' _chem_comp.formula_weight 748.984 _chem_comp.id ZIT _chem_comp.mon_nstd_flag . _chem_comp.name AZITHROMYCIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 ZIT sing 398 n n C1 O1 ZIT doub 399 n n C1 O14 ZIT sing 400 n n C2 C3 ZIT sing 401 n n C2 C17 ZIT sing 402 n n C2 H2 ZIT sing 403 n n C3 C4 ZIT sing 404 n n C3 O1B ZIT sing 405 n n C3 H3 ZIT sing 406 n n C4 C5 ZIT sing 407 n n C4 C18 ZIT sing 408 n n C4 H4 ZIT sing 409 n n C5 C6 ZIT sing 410 n n C5 O1A ZIT sing 411 n n C5 H5 ZIT sing 412 n n C6 C7 ZIT sing 413 n n C6 C19 ZIT sing 414 n n C6 O6 ZIT sing 415 n n C7 C8 ZIT sing 416 n n C7 H71 ZIT sing 417 n n C7 H72 ZIT sing 418 n n C8 C9 ZIT sing 419 n n C8 C20 ZIT sing 420 n n C8 H8 ZIT sing 421 n n C9 N10 ZIT sing 422 n n C9 H91 ZIT sing 423 n n C9 H92 ZIT sing 424 n n N10 C11 ZIT sing 425 n n N10 C21 ZIT sing 426 n n C11 C12 ZIT sing 427 n n C11 C22 ZIT sing 428 n n C11 H11 ZIT sing 429 n n C12 C13 ZIT sing 430 n n C12 O12 ZIT sing 431 n n C12 H12 ZIT sing 432 n n C13 C14 ZIT sing 433 n n C13 C23 ZIT sing 434 n n C13 O13 ZIT sing 435 n n C14 C15 ZIT sing 436 n n C14 O14 ZIT sing 437 n n C14 H14 ZIT sing 438 n n C15 C16 ZIT sing 439 n n C15 H151 ZIT sing 440 n n C15 H152 ZIT sing 441 n n C16 H161 ZIT sing 442 n n C16 H162 ZIT sing 443 n n C16 H163 ZIT sing 444 n n C17 H171 ZIT sing 445 n n C17 H172 ZIT sing 446 n n C17 H173 ZIT sing 447 n n C18 H181 ZIT sing 448 n n C18 H182 ZIT sing 449 n n C18 H183 ZIT sing 450 n n C19 H191 ZIT sing 451 n n C19 H192 ZIT sing 452 n n C19 H193 ZIT sing 453 n n C20 H201 ZIT sing 454 n n C20 H202 ZIT sing 455 n n C20 H203 ZIT sing 456 n n C21 H211 ZIT sing 457 n n C21 H212 ZIT sing 458 n n C21 H213 ZIT sing 459 n n C22 H221 ZIT sing 460 n n C22 H222 ZIT sing 461 n n C22 H223 ZIT sing 462 n n C23 H231 ZIT sing 463 n n C23 H232 ZIT sing 464 n n C23 H233 ZIT sing 465 n n O6 HO6 ZIT sing 466 n n O12 HO12 ZIT sing 467 n n O13 HO13 ZIT sing 468 n n C1A C2A ZIT sing 469 n n C1A O1A ZIT sing 470 n n C1A O5A ZIT sing 471 n n C1A H1A1 ZIT sing 472 n n C2A C3A ZIT sing 473 n n C2A O2A ZIT sing 474 n n C2A H2A1 ZIT sing 475 n n C3A C4A ZIT sing 476 n n C3A N3A ZIT sing 477 n n C3A H3A1 ZIT sing 478 n n C4A C5A ZIT sing 479 n n C4A H4A1 ZIT sing 480 n n C4A H4A2 ZIT sing 481 n n C5A C6A ZIT sing 482 n n C5A O5A ZIT sing 483 n n C5A H5A1 ZIT sing 484 n n C6A H6A1 ZIT sing 485 n n C6A H6A2 ZIT sing 486 n n C6A H6A3 ZIT sing 487 n n C7A N3A ZIT sing 488 n n C7A H7A1 ZIT sing 489 n n C7A H7A2 ZIT sing 490 n n C7A H7A3 ZIT sing 491 n n C8A N3A ZIT sing 492 n n C8A H8A1 ZIT sing 493 n n C8A H8A2 ZIT sing 494 n n C8A H8A3 ZIT sing 495 n n O2A HO2A ZIT sing 496 n n C1B C2B ZIT sing 497 n n C1B O1B ZIT sing 498 n n C1B O5B ZIT sing 499 n n C1B H1B1 ZIT sing 500 n n C2B C3B ZIT sing 501 n n C2B H2B1 ZIT sing 502 n n C2B H2B2 ZIT sing 503 n n C3B C4B ZIT sing 504 n n C3B C7B ZIT sing 505 n n C3B O3B ZIT sing 506 n n C4B C5B ZIT sing 507 n n C4B O4B ZIT sing 508 n n C4B H4B1 ZIT sing 509 n n C5B C6B ZIT sing 510 n n C5B O5B ZIT sing 511 n n C5B H5B1 ZIT sing 512 n n C6B H6B1 ZIT sing 513 n n C6B H6B2 ZIT sing 514 n n C6B H6B3 ZIT sing 515 n n C7B H7B1 ZIT sing 516 n n C7B H7B2 ZIT sing 517 n n C7B H7B3 ZIT sing 518 n n C8B O3B ZIT sing 519 n n C8B H8B1 ZIT sing 520 n n C8B H8B2 ZIT sing 521 n n C8B H8B3 ZIT sing 522 n n O4B HO4B ZIT sing 523 n n # _atom_sites.entry_id 7W1A _atom_sites.fract_transf_matrix[1][1] 0.012344 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003472 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021809 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011584 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GMP B 1 401 301 GMP GMP . D 3 ZIT B 1 402 302 ZIT ZIT . E 2 GMP A 1 401 301 GMP GMP . F 3 ZIT A 1 402 302 ZIT ZIT . G 4 HOH B 1 501 31 HOH HOH . G 4 HOH B 2 502 61 HOH HOH . G 4 HOH B 3 503 24 HOH HOH . G 4 HOH B 4 504 118 HOH HOH . G 4 HOH B 5 505 50 HOH HOH . G 4 HOH B 6 506 114 HOH HOH . G 4 HOH B 7 507 113 HOH HOH . G 4 HOH B 8 508 51 HOH HOH . G 4 HOH B 9 509 44 HOH HOH . G 4 HOH B 10 510 1 HOH HOH . G 4 HOH B 11 511 94 HOH HOH . G 4 HOH B 12 512 5 HOH HOH . G 4 HOH B 13 513 27 HOH HOH . G 4 HOH B 14 514 107 HOH HOH . G 4 HOH B 15 515 112 HOH HOH . G 4 HOH B 16 516 124 HOH HOH . G 4 HOH B 17 517 105 HOH HOH . G 4 HOH B 18 518 12 HOH HOH . G 4 HOH B 19 519 6 HOH HOH . G 4 HOH B 20 520 78 HOH HOH . G 4 HOH B 21 521 2 HOH HOH . G 4 HOH B 22 522 95 HOH HOH . G 4 HOH B 23 523 70 HOH HOH . G 4 HOH B 24 524 84 HOH HOH . G 4 HOH B 25 525 19 HOH HOH . G 4 HOH B 26 526 43 HOH HOH . G 4 HOH B 27 527 4 HOH HOH . G 4 HOH B 28 528 53 HOH HOH . G 4 HOH B 29 529 3 HOH HOH . G 4 HOH B 30 530 15 HOH HOH . G 4 HOH B 31 531 45 HOH HOH . G 4 HOH B 32 532 63 HOH HOH . G 4 HOH B 33 533 29 HOH HOH . G 4 HOH B 34 534 122 HOH HOH . G 4 HOH B 35 535 68 HOH HOH . G 4 HOH B 36 536 120 HOH HOH . G 4 HOH B 37 537 121 HOH HOH . H 4 HOH A 1 501 38 HOH HOH . H 4 HOH A 2 502 46 HOH HOH . H 4 HOH A 3 503 25 HOH HOH . H 4 HOH A 4 504 23 HOH HOH . H 4 HOH A 5 505 14 HOH HOH . H 4 HOH A 6 506 119 HOH HOH . H 4 HOH A 7 507 48 HOH HOH . H 4 HOH A 8 508 42 HOH HOH . H 4 HOH A 9 509 67 HOH HOH . H 4 HOH A 10 510 75 HOH HOH . H 4 HOH A 11 511 117 HOH HOH . H 4 HOH A 12 512 33 HOH HOH . H 4 HOH A 13 513 34 HOH HOH . H 4 HOH A 14 514 62 HOH HOH . H 4 HOH A 15 515 59 HOH HOH . H 4 HOH A 16 516 18 HOH HOH . H 4 HOH A 17 517 10 HOH HOH . H 4 HOH A 18 518 65 HOH HOH . H 4 HOH A 19 519 20 HOH HOH . H 4 HOH A 20 520 66 HOH HOH . H 4 HOH A 21 521 89 HOH HOH . H 4 HOH A 22 522 72 HOH HOH . H 4 HOH A 23 523 99 HOH HOH . H 4 HOH A 24 524 85 HOH HOH . H 4 HOH A 25 525 30 HOH HOH . H 4 HOH A 26 526 57 HOH HOH . H 4 HOH A 27 527 39 HOH HOH . H 4 HOH A 28 528 40 HOH HOH . H 4 HOH A 29 529 123 HOH HOH . H 4 HOH A 30 530 86 HOH HOH . H 4 HOH A 31 531 125 HOH HOH . H 4 HOH A 32 532 91 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 ZIT . . . D 3 8.072 3.113 39.594 1 81.35 ? C1 ZIT 402 B 1 HETATM 2 C C2 ZIT . . . D 3 8.118 1.989 38.611 1 75.66 ? C2 ZIT 402 B 1 HETATM 3 C C3 ZIT . . . D 3 9.522 1.537 38.272 1 76.96 ? C3 ZIT 402 B 1 HETATM 4 C C4 ZIT . . . D 3 10.123 2.276 37.141 1 73.47 ? C4 ZIT 402 B 1 HETATM 5 C C5 ZIT . . . D 3 11.627 2.298 36.948 1 76.47 ? C5 ZIT 402 B 1 HETATM 6 C C6 ZIT . . . D 3 12.5 3.279 37.718 1 77.3 ? C6 ZIT 402 B 1 HETATM 7 C C7 ZIT . . . D 3 12.693 4.519 36.859 1 77.67 ? C7 ZIT 402 B 1 HETATM 8 C C8 ZIT . . . D 3 13.518 5.625 37.513 1 79.27 ? C8 ZIT 402 B 1 HETATM 9 C C9 ZIT . . . D 3 12.63 6.751 37.956 1 78.74 ? C9 ZIT 402 B 1 HETATM 10 N N10 ZIT . . . D 3 11.852 6.39 39.157 1 81.68 ? N10 ZIT 402 B 1 HETATM 11 C C11 ZIT . . . D 3 10.494 7.043 39.187 1 83.17 ? C11 ZIT 402 B 1 HETATM 12 C C12 ZIT . . . D 3 9.472 6.141 39.81 1 83.91 ? C12 ZIT 402 B 1 HETATM 13 C C13 ZIT . . . D 3 7.977 6.462 39.654 1 86.85 ? C13 ZIT 402 B 1 HETATM 14 C C14 ZIT . . . D 3 7.104 5.274 40.059 1 82.25 ? C14 ZIT 402 B 1 HETATM 15 C C15 ZIT . . . D 3 5.594 5.524 39.949 1 81.11 ? C15 ZIT 402 B 1 HETATM 16 C C16 ZIT . . . D 3 4.773 4.388 40.559 1 76.2 ? C16 ZIT 402 B 1 HETATM 17 C C17 ZIT . . . D 3 7.191 0.881 39.083 1 69.96 ? C17 ZIT 402 B 1 HETATM 18 C C18 ZIT . . . D 3 9.426 1.986 35.804 1 69.04 ? C18 ZIT 402 B 1 HETATM 19 C C19 ZIT . . . D 3 13.821 2.622 38.096 1 76.38 ? C19 ZIT 402 B 1 HETATM 20 C C20 ZIT . . . D 3 14.579 6.1 36.528 1 77.16 ? C20 ZIT 402 B 1 HETATM 21 C C21 ZIT . . . D 3 12.683 6.43 40.418 1 80.2 ? C21 ZIT 402 B 1 HETATM 22 C C22 ZIT . . . D 3 10.553 8.457 39.805 1 79.47 ? C22 ZIT 402 B 1 HETATM 23 C C23 ZIT . . . D 3 7.76 6.833 38.191 1 87.24 ? C23 ZIT 402 B 1 HETATM 24 O O1 ZIT . . . D 3 8.657 3.051 40.648 1 78.92 ? O1 ZIT 402 B 1 HETATM 25 O O6 ZIT . . . D 3 11.807 3.624 38.938 1 84.94 ? O6 ZIT 402 B 1 HETATM 26 O O12 ZIT . . . D 3 9.756 5.917 41.21 1 81.55 ? O12 ZIT 402 B 1 HETATM 27 O O13 ZIT . . . D 3 7.651 7.605 40.457 1 83.38 ? O13 ZIT 402 B 1 HETATM 28 O O14 ZIT . . . D 3 7.348 4.146 39.193 1 89.21 ? O14 ZIT 402 B 1 HETATM 29 C C1A ZIT . . . D 3 12.486 0.992 35.046 1 67.19 ? C1A ZIT 402 B 1 HETATM 30 C C2A ZIT . . . D 3 12.501 1.211 33.555 1 65.56 ? C2A ZIT 402 B 1 HETATM 31 C C3A ZIT . . . D 3 13.193 0.053 32.856 1 67.18 ? C3A ZIT 402 B 1 HETATM 32 C C4A ZIT . . . D 3 14.605 -0.12 33.424 1 69.34 ? C4A ZIT 402 B 1 HETATM 33 C C5A ZIT . . . D 3 14.442 -0.385 34.905 1 69.75 ? C5A ZIT 402 B 1 HETATM 34 C C6A ZIT . . . D 3 15.793 -0.567 35.593 1 77.43 ? C6A ZIT 402 B 1 HETATM 35 C C7A ZIT . . . D 3 13.682 -0.895 30.66 1 59.42 ? C7A ZIT 402 B 1 HETATM 36 C C8A ZIT . . . D 3 13.773 1.514 30.95 1 68.95 ? C8A ZIT 402 B 1 HETATM 37 O O1A ZIT . . . D 3 12.046 2.176 35.629 1 70.92 ? O1A ZIT 402 B 1 HETATM 38 O O2A ZIT . . . D 3 11.162 1.341 33.087 1 64.83 ? O2A ZIT 402 B 1 HETATM 39 N N3A ZIT . . . D 3 13.132 0.261 31.403 1 67.24 ? N3A ZIT 402 B 1 HETATM 40 O O5A ZIT . . . D 3 13.797 0.719 35.518 1 73.28 ? O5A ZIT 402 B 1 HETATM 41 C C1B ZIT . . . D 3 9.865 -0.75 38.94 1 74.83 ? C1B ZIT 402 B 1 HETATM 42 C C2B ZIT . . . D 3 9.283 -2.096 38.577 1 69.25 ? C2B ZIT 402 B 1 HETATM 43 C C3B ZIT . . . D 3 9.858 -2.927 37.443 1 63.59 ? C3B ZIT 402 B 1 HETATM 44 C C4B ZIT . . . D 3 11.33 -3.065 37.742 1 70.41 ? C4B ZIT 402 B 1 HETATM 45 C C5B ZIT . . . D 3 11.964 -1.758 38.156 1 71.49 ? C5B ZIT 402 B 1 HETATM 46 C C6B ZIT . . . D 3 13.488 -1.733 38.207 1 70.56 ? C6B ZIT 402 B 1 HETATM 47 C C7B ZIT . . . D 3 9.187 -4.29 37.348 1 56.61 ? C7B ZIT 402 B 1 HETATM 48 C C8B ZIT . . . D 3 8.484 -1.929 35.628 1 59.94 ? C8B ZIT 402 B 1 HETATM 49 O O1B ZIT . . . D 3 9.574 0.158 37.894 1 72.61 ? O1B ZIT 402 B 1 HETATM 50 O O3B ZIT . . . D 3 9.773 -2.209 36.203 1 66.09 ? O3B ZIT 402 B 1 HETATM 51 O O4B ZIT . . . D 3 12.049 -3.637 36.651 1 63.29 ? O4B ZIT 402 B 1 HETATM 52 O O5B ZIT . . . D 3 11.267 -0.945 39.049 1 80.08 ? O5B ZIT 402 B 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 52 #