data_7W37
#
_model_server_result.job_id            mM9wd7YK0_LO3qd1K7p0Zg 
_model_server_result.datetime_utc      '2024-11-25 16:28:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7w37 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"DB","auth_seq_id":501}' 
#
_entry.id    7W37 
#
_exptl.entry_id    7W37 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          34 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7W37 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7W37 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    47-meric 
_pdbx_struct_assembly.oligomeric_count      47 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 34 VA N N 
? 34 XA N N 
? 34 BB N N 
? 34 DB N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 236 A CYS 236 1_555 A SG CYS 270 A CYS 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf2 U SG CYS 633 U CYS 633 1_555 U SG CYS 659 U CYS 659 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
metalc ? metalc1 A OG1 THR 223 A THR 223 1_555 WA MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.785 ? 
metalc ? metalc2 VA O3G ATP . A ATP 501 1_555 WA MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.712 ? 
metalc ? metalc3 VA O2B ATP . A ATP 501 1_555 WA MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.8 ? 
metalc ? metalc4 B OG1 THR 233 B THR 233 1_555 YA MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? 
metalc ? metalc5 XA O1G ATP . B ATP 501 1_555 YA MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? 
metalc ? metalc6 XA O1B ATP . B ATP 501 1_555 YA MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.151 ? 
metalc ? metalc7 ZA O2B ADP . C ADP 501 1_555 AB MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? 
metalc ? metalc8 ZA O3B ADP . C ADP 501 1_555 AB MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? 
metalc ? metalc9 D OG1 THR 213 D THR 213 1_555 CB MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? 
metalc ? metalc10 BB O3G ATP . D ATP 501 1_555 CB MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? 
metalc ? metalc11 BB O2B ATP . D ATP 501 1_555 CB MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? 
metalc ? metalc12 E OG1 THR 195 E THR 181 1_555 EB MG MG . E MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? 
metalc ? metalc13 DB O2G ATP . E ATP 501 1_555 EB MG MG . E MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.745 ? 
metalc ? metalc14 DB O2B ATP . E ATP 501 1_555 EB MG MG . E MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? 
metalc ? metalc15 F OG1 THR 234 F THR 234 1_555 GB MG MG . F MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.522 ? 
metalc ? metalc16 FB O1B ADP . F ADP 501 1_555 GB MG MG . F MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? 
metalc ? metalc17 FB O2B ADP . F ADP 501 1_555 GB MG MG . F MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.768 ? 
metalc ? metalc18 CA NE2 HIS 113 c HIS 113 1_555 HB ZN ZN . c ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? 
metalc ? metalc19 CA NE2 HIS 115 c HIS 115 1_555 HB ZN ZN . c ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? 
metalc ? metalc20 CA OD2 ASP 126 c ASP 126 1_555 HB ZN ZN . c ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ATP doub 114 n n 
PG O2G ATP sing 115 n n 
PG O3G ATP sing 116 n n 
PG O3B ATP sing 117 n n 
O2G HOG2 ATP sing 118 n n 
O3G HOG3 ATP sing 119 n n 
PB O1B ATP doub 120 n n 
PB O2B ATP sing 121 n n 
PB O3B ATP sing 122 n n 
PB O3A ATP sing 123 n n 
O2B HOB2 ATP sing 124 n n 
PA O1A ATP doub 125 n n 
PA O2A ATP sing 126 n n 
PA O3A ATP sing 127 n n 
PA O5' ATP sing 128 n n 
O2A HOA2 ATP sing 129 n n 
O5' C5' ATP sing 130 n n 
C5' C4' ATP sing 131 n n 
C5' "H5'1" ATP sing 132 n n 
C5' "H5'2" ATP sing 133 n n 
C4' O4' ATP sing 134 n n 
C4' C3' ATP sing 135 n n 
C4' H4' ATP sing 136 n n 
O4' C1' ATP sing 137 n n 
C3' O3' ATP sing 138 n n 
C3' C2' ATP sing 139 n n 
C3' H3' ATP sing 140 n n 
O3' HO3' ATP sing 141 n n 
C2' O2' ATP sing 142 n n 
C2' C1' ATP sing 143 n n 
C2' H2' ATP sing 144 n n 
O2' HO2' ATP sing 145 n n 
C1' N9 ATP sing 146 n n 
C1' H1' ATP sing 147 n n 
N9 C8 ATP sing 148 n y 
N9 C4 ATP sing 149 n y 
C8 N7 ATP doub 150 n y 
C8 H8 ATP sing 151 n n 
N7 C5 ATP sing 152 n y 
C5 C6 ATP sing 153 n y 
C5 C4 ATP doub 154 n y 
C6 N6 ATP sing 155 n n 
C6 N1 ATP doub 156 n y 
N6 HN61 ATP sing 157 n n 
N6 HN62 ATP sing 158 n n 
N1 C2 ATP sing 159 n y 
C2 N3 ATP doub 160 n y 
C2 H2 ATP sing 161 n n 
N3 C4 ATP sing 162 n y 
#
_atom_sites.entry_id                     7W37 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
VA 34 ATP A 1 501 501 ATP ATP . 
WA 35 MG A 1 502 502 MG MG . 
XA 34 ATP B 1 501 501 ATP ATP . 
YA 35 MG B 1 502 502 MG MG . 
ZA 36 ADP C 1 501 501 ADP ADP . 
AB 35 MG C 1 502 502 MG MG . 
BB 34 ATP D 1 501 501 ATP ATP . 
CB 35 MG D 1 502 502 MG MG . 
DB 34 ATP E 1 501 501 ATP ATP . 
EB 35 MG E 1 502 502 MG MG . 
FB 36 ADP F 1 501 501 ADP ADP . 
GB 35 MG F 1 502 502 MG MG . 
HB 37 ZN c 1 401 401 ZN ZN . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . DB 34 242.648 249.185 234.001 1 93.28 ? PG ATP 501 E 1 
HETATM 2 O O1G ATP . . . DB 34 241.64 249.509 232.928 1 93.28 ? O1G ATP 501 E 1 
HETATM 3 O O2G ATP . . . DB 34 244.043 249.69 233.724 1 93.28 ? O2G ATP 501 E 1 
HETATM 4 O O3G ATP . . . DB 34 242.586 247.753 234.458 1 93.28 ? O3G ATP 501 E 1 
HETATM 5 P PB ATP . . . DB 34 242.596 249.793 236.777 1 93.28 ? PB ATP 501 E 1 
HETATM 6 O O1B ATP . . . DB 34 241.48 249.036 237.443 1 93.28 ? O1B ATP 501 E 1 
HETATM 7 O O2B ATP . . . DB 34 243.999 249.241 236.831 1 93.28 ? O2B ATP 501 E 1 
HETATM 8 O O3B ATP . . . DB 34 242.156 250.072 235.252 1 93.28 ? O3B ATP 501 E 1 
HETATM 9 P PA ATP . . . DB 34 243.837 252.265 237.271 1 93.28 ? PA ATP 501 E 1 
HETATM 10 O O1A ATP . . . DB 34 244.686 252.095 238.504 1 93.28 ? O1A ATP 501 E 1 
HETATM 11 O O2A ATP . . . DB 34 244.452 252.129 235.899 1 93.28 ? O2A ATP 501 E 1 
HETATM 12 O O3A ATP . . . DB 34 242.579 251.274 237.403 1 93.28 ? O3A ATP 501 E 1 
HETATM 13 O O5' ATP . . . DB 34 243.161 253.72 237.341 1 93.28 ? O5' ATP 501 E 1 
HETATM 14 C C5' ATP . . . DB 34 244.006 254.864 237.23 1 93.28 ? C5' ATP 501 E 1 
HETATM 15 C C4' ATP . . . DB 34 243.328 256.171 237.633 1 93.28 ? C4' ATP 501 E 1 
HETATM 16 O O4' ATP . . . DB 34 242.157 255.968 238.431 1 93.28 ? O4' ATP 501 E 1 
HETATM 17 C C3' ATP . . . DB 34 244.279 257.011 238.462 1 93.28 ? C3' ATP 501 E 1 
HETATM 18 O O3' ATP . . . DB 34 244.286 258.351 237.962 1 93.28 ? O3' ATP 501 E 1 
HETATM 19 C C2' ATP . . . DB 34 243.75 256.907 239.88 1 93.28 ? C2' ATP 501 E 1 
HETATM 20 O O2' ATP . . . DB 34 243.922 258.109 240.64 1 93.28 ? O2' ATP 501 E 1 
HETATM 21 C C1' ATP . . . DB 34 242.279 256.571 239.719 1 93.28 ? C1' ATP 501 E 1 
HETATM 22 N N9 ATP . . . DB 34 241.819 255.624 240.764 1 93.28 ? N9 ATP 501 E 1 
HETATM 23 C C8 ATP . . . DB 34 241.434 254.352 240.551 1 93.28 ? C8 ATP 501 E 1 
HETATM 24 N N7 ATP . . . DB 34 241.065 253.753 241.706 1 93.28 ? N7 ATP 501 E 1 
HETATM 25 C C5 ATP . . . DB 34 241.21 254.648 242.692 1 93.28 ? C5 ATP 501 E 1 
HETATM 26 C C6 ATP . . . DB 34 240.999 254.655 244.155 1 93.28 ? C6 ATP 501 E 1 
HETATM 27 N N6 ATP . . . DB 34 240.544 253.554 244.797 1 93.28 ? N6 ATP 501 E 1 
HETATM 28 N N1 ATP . . . DB 34 241.269 255.797 244.825 1 93.28 ? N1 ATP 501 E 1 
HETATM 29 C C2 ATP . . . DB 34 241.716 256.897 244.192 1 93.28 ? C2 ATP 501 E 1 
HETATM 30 N N3 ATP . . . DB 34 241.931 256.958 242.866 1 93.28 ? N3 ATP 501 E 1 
HETATM 31 C C4 ATP . . . DB 34 241.701 255.885 242.07 1 93.28 ? C4 ATP 501 E 1 
#
_model_server_stats.io_time_ms              185 
_model_server_stats.parse_time_ms           32 
_model_server_stats.create_model_time_ms    157 
_model_server_stats.query_time_ms           310 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           31 
#