data_7W39
#
_model_server_result.job_id            Hb-WAj1rb7owAjWyNWazTQ 
_model_server_result.datetime_utc      '2024-10-20 08:17:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7w39 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"CB","auth_seq_id":501}' 
#
_entry.id    7W39 
#
_exptl.entry_id    7W39 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          36 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7W39 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7W39 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    49-meric 
_pdbx_struct_assembly.oligomeric_count      49 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 36 XA N N 
? 36 ZA N N 
? 36 CB N N 
? 36 EB N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 236 A CYS 236 1_555 A SG CYS 270 A CYS 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
metalc ? metalc1 A OG1 THR 223 A THR 223 1_555 YA MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? 
metalc ? metalc2 XA O1G ATP . A ATP 501 1_555 YA MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? 
metalc ? metalc3 XA O3G ATP . A ATP 501 1_555 YA MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? 
metalc ? metalc4 XA O2B ATP . A ATP 501 1_555 YA MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? 
metalc ? metalc5 XA O3B ATP . A ATP 501 1_555 YA MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.729 ? 
metalc ? metalc6 B OG1 THR 233 B THR 233 1_555 AB MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? 
metalc ? metalc7 ZA O2G ATP . B ATP 501 1_555 AB MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? 
metalc ? metalc8 ZA O1B ATP . B ATP 501 1_555 AB MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? 
metalc ? metalc9 ZA O3B ATP . B ATP 501 1_555 AB MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? 
metalc ? metalc10 D OG1 THR 213 D THR 213 1_555 DB MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.193 ? 
metalc ? metalc11 CB O1G ATP . D ATP 501 1_555 DB MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.889 ? 
metalc ? metalc12 CB O1B ATP . D ATP 501 1_555 DB MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.568 ? 
metalc ? metalc13 CB O2B ATP . D ATP 501 1_555 DB MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.762 ? 
metalc ? metalc14 CB O3B ATP . D ATP 501 1_555 DB MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.927 ? 
metalc ? metalc15 E OG1 THR 195 E THR 181 1_555 FB MG MG . E MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? 
metalc ? metalc16 EB O2G ATP . E ATP 501 1_555 FB MG MG . E MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? 
metalc ? metalc17 EB O2B ATP . E ATP 501 1_555 FB MG MG . E MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? 
metalc ? metalc18 F OG1 THR 234 F THR 234 1_555 HB MG MG . F MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.665 ? 
metalc ? metalc19 GB O1B ADP . F ADP 501 1_555 HB MG MG . F MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? 
metalc ? metalc20 GB O3B ADP . F ADP 501 1_555 HB MG MG . F MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? 
metalc ? metalc21 CA NE2 HIS 113 c HIS 113 1_555 IB ZN ZN . c ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? 
metalc ? metalc22 CA NE2 HIS 115 c HIS 115 1_555 IB ZN ZN . c ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? 
metalc ? metalc23 CA OD2 ASP 126 c ASP 126 1_555 IB ZN ZN . c ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     7W39 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
XA 36 ATP A 1 501 501 ATP ATP . 
YA 37 MG A 1 502 502 MG MG . 
ZA 36 ATP B 1 501 501 ATP ATP . 
AB 37 MG B 1 502 502 MG MG . 
BB 38 ADP C 1 501 501 ADP ADP . 
CB 36 ATP D 1 501 501 ATP ATP . 
DB 37 MG D 1 502 502 MG MG . 
EB 36 ATP E 1 501 501 ATP ATP . 
FB 37 MG E 1 502 502 MG MG . 
GB 38 ADP F 1 501 501 ADP ADP . 
HB 37 MG F 1 502 502 MG MG . 
IB 39 ZN c 1 401 401 ZN ZN . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . CB 36 250.631 219.175 232.829 1 116.73 ? PG ATP 501 D 1 
HETATM 2 O O1G ATP . . . CB 36 251.997 218.693 232.402 1 116.73 ? O1G ATP 501 D 1 
HETATM 3 O O2G ATP . . . CB 36 250.516 220.657 233.057 1 116.73 ? O2G ATP 501 D 1 
HETATM 4 O O3G ATP . . . CB 36 249.52 218.602 231.99 1 116.73 ? O3G ATP 501 D 1 
HETATM 5 P PB ATP . . . CB 36 251.548 218.129 235.307 1 116.73 ? PB ATP 501 D 1 
HETATM 6 O O1B ATP . . . CB 36 251.784 216.648 235.12 1 116.73 ? O1B ATP 501 D 1 
HETATM 7 O O2B ATP . . . CB 36 252.696 219.108 235.227 1 116.73 ? O2B ATP 501 D 1 
HETATM 8 O O3B ATP . . . CB 36 250.369 218.558 234.295 1 116.73 ? O3B ATP 501 D 1 
HETATM 9 P PA ATP . . . CB 36 251.364 217.729 238.094 1 116.73 ? PA ATP 501 D 1 
HETATM 10 O O1A ATP . . . CB 36 250.218 216.919 238.633 1 116.73 ? O1A ATP 501 D 1 
HETATM 11 O O2A ATP . . . CB 36 252.726 217.103 237.894 1 116.73 ? O2A ATP 501 D 1 
HETATM 12 O O3A ATP . . . CB 36 250.839 218.39 236.726 1 116.73 ? O3A ATP 501 D 1 
HETATM 13 O O5' ATP . . . CB 36 251.552 218.974 239.089 1 116.73 ? O5' ATP 501 D 1 
HETATM 14 C C5' ATP . . . CB 36 252.371 218.799 240.242 1 116.73 ? C5' ATP 501 D 1 
HETATM 15 C C4' ATP . . . CB 36 251.585 218.991 241.532 1 116.73 ? C4' ATP 501 D 1 
HETATM 16 O O4' ATP . . . CB 36 250.439 218.137 241.601 1 116.73 ? O4' ATP 501 D 1 
HETATM 17 C C3' ATP . . . CB 36 252.472 218.653 242.713 1 116.73 ? C3' ATP 501 D 1 
HETATM 18 O O3' ATP . . . CB 36 252.52 219.777 243.597 1 116.73 ? O3' ATP 501 D 1 
HETATM 19 C C2' ATP . . . CB 36 251.855 217.411 243.336 1 116.73 ? C2' ATP 501 D 1 
HETATM 20 O O2' ATP . . . CB 36 251.847 217.429 244.77 1 116.73 ? O2' ATP 501 D 1 
HETATM 21 C C1' ATP . . . CB 36 250.434 217.355 242.799 1 116.73 ? C1' ATP 501 D 1 
HETATM 22 N N9 ATP . . . CB 36 250.011 215.956 242.518 1 116.73 ? N9 ATP 501 D 1 
HETATM 23 C C8 ATP . . . CB 36 249.582 215.497 241.327 1 116.73 ? C8 ATP 501 D 1 
HETATM 24 N N7 ATP . . . CB 36 249.264 214.183 241.376 1 116.73 ? N7 ATP 501 D 1 
HETATM 25 C C5 ATP . . . CB 36 249.483 213.777 242.636 1 116.73 ? C5 ATP 501 D 1 
HETATM 26 C C6 ATP . . . CB 36 249.361 212.5 243.368 1 116.73 ? C6 ATP 501 D 1 
HETATM 27 N N6 ATP . . . CB 36 248.921 211.395 242.739 1 116.73 ? N6 ATP 501 D 1 
HETATM 28 N N1 ATP . . . CB 36 249.693 212.47 244.675 1 116.73 ? N1 ATP 501 D 1 
HETATM 29 C C2 ATP . . . CB 36 250.133 213.572 245.302 1 116.73 ? C2 ATP 501 D 1 
HETATM 30 N N3 ATP . . . CB 36 250.273 214.767 244.701 1 116.73 ? N3 ATP 501 D 1 
HETATM 31 C C4 ATP . . . CB 36 249.974 214.94 243.389 1 116.73 ? C4 ATP 501 D 1 
#
_model_server_stats.io_time_ms              45 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    142 
_model_server_stats.query_time_ms           305 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           31 
#