data_7W47
#
_model_server_result.job_id            DsRvc5VP-Vrq70doY9MJ-w 
_model_server_result.datetime_utc      '2024-11-15 03:06:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7w47 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1102}' 
#
_entry.id    7W47 
#
_exptl.entry_id    7W47 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              85.468 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'RUBIDIUM ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7W47 
_cell.length_a            104.99 
_cell.length_b            104.99 
_cell.length_c            367.79 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7W47 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    'P 31 2"' 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
? 4 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 B SG CYS 131 B CYS 131 1_555 B SG CYS 152 B CYS 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf2 B SG CYS 162 B CYS 162 1_555 B SG CYS 178 B CYS 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf3 B SG CYS 201 B CYS 201 1_555 B SG CYS 262 B CYS 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? 
covale ? covale1 A C SER 385 A SER 384 1_555 A N BFD 386 A BFD 385 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? 
covale ? covale2 A C BFD 386 A BFD 385 1_555 A N LYS 387 A LYS 386 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale3 B ND2 ASN 99 B ASN 99 1_555 H C1 NAG . B NAG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.451 ? 
covale ? covale4 B ND2 ASN 130 B ASN 130 1_555 I C1 NAG . B NAG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.457 ? 
covale ? covale5 B ND2 ASN 161 B ASN 161 1_555 J C1 NAG . B NAG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.459 ? 
metalc ? metalc1 A O ASP 184 A ASP 183 1_555 F RB RB . A RB 1104 4_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.995 ? 
metalc ? metalc2 A O ALA 340 A ALA 339 1_555 D RB RB . A RB 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.565 ? 
metalc ? metalc3 A O VAL 342 A VAL 341 1_555 D RB RB . A RB 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.032 ? 
metalc ? metalc4 A OE2 GLU 344 A GLU 343 1_555 D RB RB . A RB 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.756 ? 
metalc ? metalc5 A OD1 BFD 386 A BFD 385 1_555 C MG MG . A MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.606 ? 
metalc ? metalc6 A OD2 BFD 386 A BFD 385 1_555 C MG MG . A MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.71 ? 
metalc ? metalc7 A O THR 388 A THR 387 1_555 C MG MG . A MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.483 ? 
metalc ? metalc8 A O SER 409 A SER 408 1_555 F RB RB . A RB 1104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.639 ? 
metalc ? metalc9 A O THR 420 A THR 419 1_555 F RB RB . A RB 1104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.642 ? 
metalc ? metalc10 A OD1 ASP 727 A ASP 726 1_555 C MG MG . A MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? 
metalc ? metalc11 A O LEU 735 A LEU 734 1_555 E RB RB . A RB 1103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.157 ? 
metalc ? metalc12 A O LYS 736 A LYS 735 1_555 E RB RB . A RB 1103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.653 ? 
metalc ? metalc13 A O ALA 738 A ALA 737 1_555 E RB RB . A RB 1103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.841 ? 
metalc ? metalc14 A OD1 ASP 757 A ASP 756 1_555 E RB RB . A RB 1103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.8 ? 
metalc ? metalc15 A OE1 GLU 821 A GLU 820 1_555 D RB RB . A RB 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.574 ? 
metalc ? metalc16 E RB RB . A RB 1103 1_555 K O HOH . A HOH 1248 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.174 ? 
#
_chem_comp.formula           'Rb 1' 
_chem_comp.formula_weight    85.468 
_chem_comp.id                RB 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'RUBIDIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     7W47 
_atom_sites.fract_transf_matrix[1][1]    0.009525 
_atom_sites.fract_transf_matrix[1][2]    0.005499 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010998 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.002719 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 MG A 1 1101 1102 MG MG . 
D 4 RB A 1 1102 1104 RB RB . 
E 4 RB A 1 1103 1105 RB RB . 
F 4 RB A 1 1104 1106 RB RB . 
G 5 8BN A 1 1105 1201 8BN TGM . 
H 6 NAG B 1 301 301 NAG NAG . 
I 6 NAG B 1 302 302 NAG NAG . 
J 6 NAG B 1 303 303 NAG NAG . 
K 7 HOH A 1 1201 88 HOH HOH . 
K 7 HOH A 2 1202 1 HOH HOH . 
K 7 HOH A 3 1203 17 HOH HOH . 
K 7 HOH A 4 1204 32 HOH HOH . 
K 7 HOH A 5 1205 10 HOH HOH . 
K 7 HOH A 6 1206 87 HOH HOH . 
K 7 HOH A 7 1207 92 HOH HOH . 
K 7 HOH A 8 1208 45 HOH HOH . 
K 7 HOH A 9 1209 68 HOH HOH . 
K 7 HOH A 10 1210 72 HOH HOH . 
K 7 HOH A 11 1211 9 HOH HOH . 
K 7 HOH A 12 1212 21 HOH HOH . 
K 7 HOH A 13 1213 40 HOH HOH . 
K 7 HOH A 14 1214 13 HOH HOH . 
K 7 HOH A 15 1215 38 HOH HOH . 
K 7 HOH A 16 1216 30 HOH HOH . 
K 7 HOH A 17 1217 15 HOH HOH . 
K 7 HOH A 18 1218 49 HOH HOH . 
K 7 HOH A 19 1219 19 HOH HOH . 
K 7 HOH A 20 1220 79 HOH HOH . 
K 7 HOH A 21 1221 74 HOH HOH . 
K 7 HOH A 22 1222 48 HOH HOH . 
K 7 HOH A 23 1223 66 HOH HOH . 
K 7 HOH A 24 1224 11 HOH HOH . 
K 7 HOH A 25 1225 93 HOH HOH . 
K 7 HOH A 26 1226 34 HOH HOH . 
K 7 HOH A 27 1227 76 HOH HOH . 
K 7 HOH A 28 1228 82 HOH HOH . 
K 7 HOH A 29 1229 42 HOH HOH . 
K 7 HOH A 30 1230 35 HOH HOH . 
K 7 HOH A 31 1231 31 HOH HOH . 
K 7 HOH A 32 1232 44 HOH HOH . 
K 7 HOH A 33 1233 67 HOH HOH . 
K 7 HOH A 34 1234 23 HOH HOH . 
K 7 HOH A 35 1235 85 HOH HOH . 
K 7 HOH A 36 1236 81 HOH HOH . 
K 7 HOH A 37 1237 47 HOH HOH . 
K 7 HOH A 38 1238 90 HOH HOH . 
K 7 HOH A 39 1239 62 HOH HOH . 
K 7 HOH A 40 1240 24 HOH HOH . 
K 7 HOH A 41 1241 64 HOH HOH . 
K 7 HOH A 42 1242 75 HOH HOH . 
K 7 HOH A 43 1243 78 HOH HOH . 
K 7 HOH A 44 1244 36 HOH HOH . 
K 7 HOH A 45 1245 2 HOH HOH . 
K 7 HOH A 46 1246 80 HOH HOH . 
K 7 HOH A 47 1247 91 HOH HOH . 
K 7 HOH A 48 1248 71 HOH HOH . 
K 7 HOH A 49 1249 53 HOH HOH . 
K 7 HOH A 50 1250 56 HOH HOH . 
K 7 HOH A 51 1251 37 HOH HOH . 
K 7 HOH A 52 1252 5 HOH HOH . 
K 7 HOH A 53 1253 94 HOH HOH . 
K 7 HOH A 54 1254 58 HOH HOH . 
K 7 HOH A 55 1255 33 HOH HOH . 
K 7 HOH A 56 1256 70 HOH HOH . 
K 7 HOH A 57 1257 54 HOH HOH . 
K 7 HOH A 58 1258 73 HOH HOH . 
K 7 HOH A 59 1259 65 HOH HOH . 
K 7 HOH A 60 1260 60 HOH HOH . 
K 7 HOH A 61 1261 61 HOH HOH . 
K 7 HOH A 62 1262 63 HOH HOH . 
K 7 HOH A 63 1263 59 HOH HOH . 
L 7 HOH B 1 401 26 HOH HOH . 
L 7 HOH B 2 402 16 HOH HOH . 
L 7 HOH B 3 403 69 HOH HOH . 
L 7 HOH B 4 404 14 HOH HOH . 
L 7 HOH B 5 405 7 HOH HOH . 
L 7 HOH B 6 406 89 HOH HOH . 
L 7 HOH B 7 407 86 HOH HOH . 
L 7 HOH B 8 408 55 HOH HOH . 
L 7 HOH B 9 409 6 HOH HOH . 
L 7 HOH B 10 410 3 HOH HOH . 
L 7 HOH B 11 411 77 HOH HOH . 
L 7 HOH B 12 412 52 HOH HOH . 
L 7 HOH B 13 413 57 HOH HOH . 
L 7 HOH B 14 414 18 HOH HOH . 
L 7 HOH B 15 415 27 HOH HOH . 
L 7 HOH B 16 416 84 HOH HOH . 
L 7 HOH B 17 417 83 HOH HOH . 
L 7 HOH B 18 418 12 HOH HOH . 
L 7 HOH B 19 419 22 HOH HOH . 
L 7 HOH B 20 420 39 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           RB 
_atom_site.label_atom_id         RB 
_atom_site.label_comp_id         RB 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               39.004 
_atom_site.Cartn_y               -39.791 
_atom_site.Cartn_z               -59.502 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        95.75 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          RB 
_atom_site.auth_comp_id          RB 
_atom_site.auth_seq_id           1102 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              45 
_model_server_stats.parse_time_ms           23 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           257 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           1 
#