data_7W4O # _model_server_result.job_id za_VUp60rsA07zFviJFRPw _model_server_result.datetime_utc '2024-11-04 23:21:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7w4o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":1604}' # _entry.id 7W4O # _exptl.entry_id 7W4O _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 291.778 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-chloranyl-~{N}-(1-methylcyclopropyl)-1,1-bis(oxidanylidene)-4~{H}-thieno[3,2-e][1,2,4]thiadiazin-3-amine _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7W4O _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7W4O _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 L N N ? 5 Q N N ? 5 V N N ? 5 AA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 110 A CYS 110 1_555 A SG CYS 142 A CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 B SG CYS 6 B CYS 6 1_555 B SG CYS 26 B CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf3 C SG CYS 110 C CYS 110 1_555 C SG CYS 142 C CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 D SG CYS 6 D CYS 6 1_555 D SG CYS 26 D CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf5 E SG CYS 110 E CYS 110 1_555 E SG CYS 142 E CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf6 F SG CYS 6 F CYS 6 1_555 F SG CYS 26 F CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf7 G SG CYS 110 G CYS 110 1_555 G SG CYS 142 G CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf8 H SG CYS 6 H CYS 6 1_555 H SG CYS 26 H CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc1 B OE1 GLN 775 B GLN 775 1_555 J MG MG . B MG 1602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? metalc ? metalc2 B OD2 ASP 854 B ASP 854 1_555 J MG MG . B MG 1602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.894 ? metalc ? metalc3 I O2B ADP . B ADP 1601 1_555 K MG MG . B MG 1603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc4 I O3B ADP . B ADP 1601 1_555 K MG MG . B MG 1603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.922 ? metalc ? metalc5 J MG MG . B MG 1602 1_555 M O1B ATP . B ATP 1605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc6 D OE1 GLN 775 D GLN 775 1_555 O MG MG . D MG 1602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? metalc ? metalc7 D OD2 ASP 854 D ASP 854 1_555 O MG MG . D MG 1602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.894 ? metalc ? metalc8 N O2B ADP . D ADP 1601 1_555 P MG MG . D MG 1603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc9 N O3B ADP . D ADP 1601 1_555 P MG MG . D MG 1603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.922 ? metalc ? metalc10 O MG MG . D MG 1602 1_555 R O1B ATP . D ATP 1605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc11 F OE1 GLN 775 F GLN 775 1_555 T MG MG . F MG 1602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? metalc ? metalc12 F OD2 ASP 854 F ASP 854 1_555 T MG MG . F MG 1602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.894 ? metalc ? metalc13 S O2B ADP . F ADP 1601 1_555 U MG MG . F MG 1603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc14 S O3B ADP . F ADP 1601 1_555 U MG MG . F MG 1603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.922 ? metalc ? metalc15 T MG MG . F MG 1602 1_555 W O1B ATP . F ATP 1605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc16 H OE1 GLN 775 H GLN 775 1_555 Y MG MG . H MG 1602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? metalc ? metalc17 H OD2 ASP 854 H ASP 854 1_555 Y MG MG . H MG 1602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.894 ? metalc ? metalc18 X O2B ADP . H ADP 1601 1_555 Z MG MG . H MG 1603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc19 X O3B ADP . H ADP 1601 1_555 Z MG MG . H MG 1603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.922 ? metalc ? metalc20 Y MG MG . H MG 1602 1_555 BA O1B ATP . H ATP 1605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? # _chem_comp.formula 'C9 H10 Cl N3 O2 S2' _chem_comp.formula_weight 291.778 _chem_comp.id E2H _chem_comp.mon_nstd_flag . _chem_comp.name 6-chloranyl-~{N}-(1-methylcyclopropyl)-1,1-bis(oxidanylidene)-4~{H}-thieno[3,2-e][1,2,4]thiadiazin-3-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C12 C09 E2H sing 176 n n O05 S02 E2H doub 177 n n C09 C11 E2H sing 178 n n C09 C10 E2H sing 179 n n C09 N06 E2H sing 180 n n N08 S02 E2H sing 181 n n N08 C13 E2H doub 182 n n S02 O04 E2H doub 183 n n S02 C15 E2H sing 184 n n C11 C10 E2H sing 185 n n N06 C13 E2H sing 186 n n C13 N07 E2H sing 187 n n C15 S03 E2H sing 188 n y C15 C14 E2H doub 189 n y S03 C17 E2H sing 190 n y N07 C14 E2H sing 191 n n C14 C16 E2H sing 192 n y C17 C16 E2H doub 193 n y C17 CL1 E2H sing 194 n n C10 H1 E2H sing 195 n n C10 H2 E2H sing 196 n n C11 H3 E2H sing 197 n n C11 H4 E2H sing 198 n n C12 H5 E2H sing 199 n n C12 H6 E2H sing 200 n n C12 H7 E2H sing 201 n n C16 H8 E2H sing 202 n n N06 H9 E2H sing 203 n n N07 H10 E2H sing 204 n n # _atom_sites.entry_id 7W4O _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 ADP B 1 1601 2002 ADP ADP . J 4 MG B 1 1602 2003 MG MG . K 4 MG B 1 1603 2004 MG MG . L 5 E2H B 1 1604 2005 E2H LIG . M 6 ATP B 1 1605 3004 ATP ATP . N 3 ADP D 1 1601 2002 ADP ADP . O 4 MG D 1 1602 2003 MG MG . P 4 MG D 1 1603 2004 MG MG . Q 5 E2H D 1 1604 2005 E2H LIG . R 6 ATP D 1 1605 3004 ATP ATP . S 3 ADP F 1 1601 2002 ADP ADP . T 4 MG F 1 1602 2003 MG MG . U 4 MG F 1 1603 2004 MG MG . V 5 E2H F 1 1604 2005 E2H LIG . W 6 ATP F 1 1605 3004 ATP ATP . X 3 ADP H 1 1601 2002 ADP ADP . Y 4 MG H 1 1602 2003 MG MG . Z 4 MG H 1 1603 2004 MG MG . AA 5 E2H H 1 1604 2005 E2H LIG . BA 6 ATP H 1 1605 3004 ATP ATP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 E2H . . . Q 5 159.251 60.448 141.706 1 74.95 ? C10 E2H 1604 D 1 HETATM 2 C C13 E2H . . . Q 5 161.89 57.792 142.091 1 83.3 ? C13 E2H 1604 D 1 HETATM 3 C C15 E2H . . . Q 5 164.594 56.288 142.431 1 79.77 ? C15 E2H 1604 D 1 HETATM 4 C C17 E2H . . . Q 5 165.338 54.533 144.075 1 85.5 ? C17 E2H 1604 D 1 HETATM 5 C C09 E2H . . . Q 5 160.198 59.416 141.094 1 78.53 ? C09 E2H 1604 D 1 HETATM 6 C C11 E2H . . . Q 5 160.694 60.842 141.361 1 75.26 ? C11 E2H 1604 D 1 HETATM 7 C C12 E2H . . . Q 5 159.967 59.035 139.615 1 78.77 ? C12 E2H 1604 D 1 HETATM 8 C C14 E2H . . . Q 5 163.512 55.996 143.329 1 77.96 ? C14 E2H 1604 D 1 HETATM 9 C C16 E2H . . . Q 5 163.975 54.88 144.382 1 81.8 ? C16 E2H 1604 D 1 HETATM 10 N N06 E2H . . . Q 5 160.566 58.401 142.073 1 79.38 ? N06 E2H 1604 D 1 HETATM 11 N N07 E2H . . . Q 5 162.141 56.717 143.205 1 81.73 ? N07 E2H 1604 D 1 HETATM 12 N N08 E2H . . . Q 5 162.94 58.161 141.123 1 83.83 ? N08 E2H 1604 D 1 HETATM 13 O O04 E2H . . . Q 5 165.345 58.507 141.484 1 85.49 ? O04 E2H 1604 D 1 HETATM 14 O O05 E2H . . . Q 5 164.528 56.716 139.94 1 88.58 ? O05 E2H 1604 D 1 HETATM 15 S S02 E2H . . . Q 5 164.375 57.443 141.207 1 90.71 ? S02 E2H 1604 D 1 HETATM 16 S S03 E2H . . . Q 5 165.796 55.382 142.856 1 88.42 ? S03 E2H 1604 D 1 HETATM 17 CL CL1 E2H . . . Q 5 166.286 53.327 144.982 1 107.16 ? CL1 E2H 1604 D 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 92 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 17 #