data_7W54 # _model_server_result.job_id 4uZkgenR_fehBQeAEV1egw _model_server_result.datetime_utc '2024-10-13 16:31:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7w54 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":101}' # _entry.id 7W54 # _exptl.entry_id 7W54 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 57.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description prop-2-en-1-amine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7W54 _cell.length_a 73.65 _cell.length_b 126.09 _cell.length_c 207.09 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7W54 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 13 A CYS 13 1_555 G C2 AYE . A AYE 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.985 ? covale ? covale2 A C GLY 205 A GLY 205 1_555 A N MSE 206 A MSE 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 A C MSE 206 A MSE 206 1_555 A N THR 207 A THR 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale4 A C LYS 259 A LYS 259 1_555 A N MSE 260 A MSE 260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale5 A C MSE 260 A MSE 260 1_555 A N THR 261 A THR 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale6 A C THR 326 A THR 326 1_555 A N MSE 327 A MSE 327 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale7 A C MSE 327 A MSE 327 1_555 A N PHE 328 A PHE 328 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale8 A C LYS 427 A LYS 427 1_555 A N MSE 428 A MSE 428 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale9 A C MSE 428 A MSE 428 1_555 A N ALA 429 A ALA 429 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale10 A C ALA 478 A ALA 478 1_555 A N MSE 479 A MSE 479 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale11 A C MSE 479 A MSE 479 1_555 A N ASN 480 A ASN 480 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale12 G N1 AYE . A AYE 601 1_555 C C GLY 75 C GLY 75 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.028 ? covale ? covale13 B SG CYS 13 B CYS 13 1_555 H C2 AYE . E AYE 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.832 ? covale ? covale14 B C GLY 205 B GLY 205 1_555 B N MSE 206 B MSE 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale15 B C MSE 206 B MSE 206 1_555 B N THR 207 B THR 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale16 B C LYS 259 B LYS 259 1_555 B N MSE 260 B MSE 260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale17 B C MSE 260 B MSE 260 1_555 B N THR 261 B THR 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale18 B C THR 326 B THR 326 1_555 B N MSE 327 B MSE 327 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale19 B C MSE 327 B MSE 327 1_555 B N PHE 328 B PHE 328 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale20 B C LYS 427 B LYS 427 1_555 B N MSE 428 B MSE 428 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale21 B C MSE 428 B MSE 428 1_555 B N ALA 429 B ALA 429 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale22 B C ALA 478 B ALA 478 1_555 B N MSE 479 B MSE 479 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale23 B C MSE 479 B MSE 479 1_555 B N ASN 480 B ASN 480 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? # _chem_comp.formula 'C3 H7 N' _chem_comp.formula_weight 57.094 _chem_comp.id AYE _chem_comp.mon_nstd_flag . _chem_comp.name prop-2-en-1-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ALLYLAMINE # _atom_sites.entry_id 7W54 _atom_sites.fract_transf_matrix[1][1] 0.013578 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007931 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004829 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 AYE A 1 601 1 AYE AYE . H 3 AYE E 1 101 2 AYE AYE . I 4 HOH A 1 701 5 HOH HOH . I 4 HOH A 2 702 28 HOH HOH . I 4 HOH A 3 703 9 HOH HOH . I 4 HOH A 4 704 8 HOH HOH . I 4 HOH A 5 705 10 HOH HOH . I 4 HOH A 6 706 23 HOH HOH . I 4 HOH A 7 707 24 HOH HOH . J 4 HOH B 1 601 31 HOH HOH . J 4 HOH B 2 602 21 HOH HOH . J 4 HOH B 3 603 13 HOH HOH . J 4 HOH B 4 604 12 HOH HOH . J 4 HOH B 5 605 33 HOH HOH . J 4 HOH B 6 606 2 HOH HOH . J 4 HOH B 7 607 32 HOH HOH . J 4 HOH B 8 608 26 HOH HOH . J 4 HOH B 9 609 19 HOH HOH . J 4 HOH B 10 610 27 HOH HOH . J 4 HOH B 11 611 25 HOH HOH . J 4 HOH B 12 612 3 HOH HOH . J 4 HOH B 13 613 4 HOH HOH . J 4 HOH B 14 614 30 HOH HOH . J 4 HOH B 15 615 1 HOH HOH . J 4 HOH B 16 616 6 HOH HOH . J 4 HOH B 17 617 15 HOH HOH . J 4 HOH B 18 618 17 HOH HOH . J 4 HOH B 19 619 29 HOH HOH . J 4 HOH B 20 620 16 HOH HOH . K 4 HOH C 1 101 20 HOH HOH . K 4 HOH C 2 102 18 HOH HOH . K 4 HOH C 3 103 22 HOH HOH . K 4 HOH C 4 104 14 HOH HOH . L 4 HOH D 1 101 11 HOH HOH . M 4 HOH E 1 201 7 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 AYE . . . H 3 -7.508 36.799 40.185 1 20 ? C2 AYE 101 E 1 HETATM 2 C C3 AYE . . . H 3 -7.122 36.075 41.206 1 20 ? C3 AYE 101 E 1 HETATM 3 C C1 AYE . . . H 3 -7.36 36.263 38.783 1 20 ? C1 AYE 101 E 1 HETATM 4 N N1 AYE . . . H 3 -8.662 36.301 38.105 1 20 ? N1 AYE 101 E 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 4 #