data_7W5N # _model_server_result.job_id av7ScUi9X2kNHszichX2bA _model_server_result.datetime_utc '2024-10-19 14:47:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7w5n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 7W5N # _exptl.entry_id 7W5N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 745.421 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.32 _cell.angle_gamma 90 _cell.entry_id 7W5N _cell.length_a 80.242 _cell.length_b 118.817 _cell.length_c 109.02 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7W5N _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C21 H30 N7 O17 P3' _chem_comp.formula_weight 745.421 _chem_comp.id NDP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NDP doub 237 n n PA O2A NDP sing 238 n n PA O5B NDP sing 239 n n PA O3 NDP sing 240 n n O2A HOA2 NDP sing 241 n n O5B C5B NDP sing 242 n n C5B C4B NDP sing 243 n n C5B H51A NDP sing 244 n n C5B H52A NDP sing 245 n n C4B O4B NDP sing 246 n n C4B C3B NDP sing 247 n n C4B H4B NDP sing 248 n n O4B C1B NDP sing 249 n n C3B O3B NDP sing 250 n n C3B C2B NDP sing 251 n n C3B H3B NDP sing 252 n n O3B HO3A NDP sing 253 n n C2B O2B NDP sing 254 n n C2B C1B NDP sing 255 n n C2B H2B NDP sing 256 n n O2B P2B NDP sing 257 n n C1B N9A NDP sing 258 n n C1B H1B NDP sing 259 n n N9A C8A NDP sing 260 n y N9A C4A NDP sing 261 n y C8A N7A NDP doub 262 n y C8A H8A NDP sing 263 n n N7A C5A NDP sing 264 n y C5A C6A NDP sing 265 n y C5A C4A NDP doub 266 n y C6A N6A NDP sing 267 n n C6A N1A NDP doub 268 n y N6A H61A NDP sing 269 n n N6A H62A NDP sing 270 n n N1A C2A NDP sing 271 n y C2A N3A NDP doub 272 n y C2A H2A NDP sing 273 n n N3A C4A NDP sing 274 n y O3 PN NDP sing 275 n n PN O1N NDP doub 276 n n PN O2N NDP sing 277 n n PN O5D NDP sing 278 n n O2N H21N NDP sing 279 n n O5D C5D NDP sing 280 n n C5D C4D NDP sing 281 n n C5D H51N NDP sing 282 n n C5D H52N NDP sing 283 n n C4D O4D NDP sing 284 n n C4D C3D NDP sing 285 n n C4D H4D NDP sing 286 n n O4D C1D NDP sing 287 n n C3D O3D NDP sing 288 n n C3D C2D NDP sing 289 n n C3D H3D NDP sing 290 n n O3D HO3N NDP sing 291 n n C2D O2D NDP sing 292 n n C2D C1D NDP sing 293 n n C2D H2D NDP sing 294 n n O2D HO2N NDP sing 295 n n C1D N1N NDP sing 296 n n C1D H1D NDP sing 297 n n N1N C2N NDP sing 298 n n N1N C6N NDP sing 299 n n C2N C3N NDP doub 300 n n C2N H2N NDP sing 301 n n C3N C7N NDP sing 302 n n C3N C4N NDP sing 303 n n C7N O7N NDP doub 304 n n C7N N7N NDP sing 305 n n N7N H71N NDP sing 306 n n N7N H72N NDP sing 307 n n C4N C5N NDP sing 308 n n C4N H41N NDP sing 309 n n C4N H42N NDP sing 310 n n C5N C6N NDP doub 311 n n C5N H5N NDP sing 312 n n C6N H6N NDP sing 313 n n P2B O1X NDP doub 314 n n P2B O2X NDP sing 315 n n P2B O3X NDP sing 316 n n O2X HOP2 NDP sing 317 n n O3X HOP3 NDP sing 318 n n # _atom_sites.entry_id 7W5N _atom_sites.fract_transf_matrix[1][1] 0.012462 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000723 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008416 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009188 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 NDP A 1 601 1 NDP NDP . F 2 NDP B 1 601 4 NDP NDP . G 2 NDP C 1 601 5 NDP NDP . H 2 NDP D 1 601 2 NDP NDP . I 3 HOH A 1 701 34 HOH HOH . I 3 HOH A 2 702 22 HOH HOH . I 3 HOH A 3 703 29 HOH HOH . I 3 HOH A 4 704 10 HOH HOH . I 3 HOH A 5 705 13 HOH HOH . I 3 HOH A 6 706 5 HOH HOH . I 3 HOH A 7 707 20 HOH HOH . I 3 HOH A 8 708 58 HOH HOH . I 3 HOH A 9 709 19 HOH HOH . I 3 HOH A 10 710 8 HOH HOH . I 3 HOH A 11 711 4 HOH HOH . I 3 HOH A 12 712 44 HOH HOH . I 3 HOH A 13 713 47 HOH HOH . I 3 HOH A 14 714 21 HOH HOH . I 3 HOH A 15 715 25 HOH HOH . I 3 HOH A 16 716 42 HOH HOH . J 3 HOH B 1 701 24 HOH HOH . J 3 HOH B 2 702 26 HOH HOH . J 3 HOH B 3 703 23 HOH HOH . J 3 HOH B 4 704 48 HOH HOH . J 3 HOH B 5 705 27 HOH HOH . J 3 HOH B 6 706 39 HOH HOH . J 3 HOH B 7 707 1 HOH HOH . J 3 HOH B 8 708 40 HOH HOH . J 3 HOH B 9 709 56 HOH HOH . J 3 HOH B 10 710 45 HOH HOH . K 3 HOH C 1 701 57 HOH HOH . K 3 HOH C 2 702 61 HOH HOH . K 3 HOH C 3 703 55 HOH HOH . K 3 HOH C 4 704 32 HOH HOH . K 3 HOH C 5 705 18 HOH HOH . K 3 HOH C 6 706 41 HOH HOH . K 3 HOH C 7 707 46 HOH HOH . K 3 HOH C 8 708 15 HOH HOH . K 3 HOH C 9 709 3 HOH HOH . K 3 HOH C 10 710 49 HOH HOH . K 3 HOH C 11 711 11 HOH HOH . K 3 HOH C 12 712 9 HOH HOH . K 3 HOH C 13 713 31 HOH HOH . K 3 HOH C 14 714 30 HOH HOH . K 3 HOH C 15 715 35 HOH HOH . K 3 HOH C 16 716 7 HOH HOH . L 3 HOH D 1 701 53 HOH HOH . L 3 HOH D 2 702 2 HOH HOH . L 3 HOH D 3 703 54 HOH HOH . L 3 HOH D 4 704 16 HOH HOH . L 3 HOH D 5 705 50 HOH HOH . L 3 HOH D 6 706 52 HOH HOH . L 3 HOH D 7 707 33 HOH HOH . L 3 HOH D 8 708 38 HOH HOH . L 3 HOH D 9 709 60 HOH HOH . L 3 HOH D 10 710 6 HOH HOH . L 3 HOH D 11 711 12 HOH HOH . L 3 HOH D 12 712 51 HOH HOH . L 3 HOH D 13 713 28 HOH HOH . L 3 HOH D 14 714 37 HOH HOH . L 3 HOH D 15 715 36 HOH HOH . L 3 HOH D 16 716 43 HOH HOH . L 3 HOH D 17 717 59 HOH HOH . L 3 HOH D 18 718 17 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NDP . . . E 2 7.502 -1.235 25.823 1 54.43 ? PA NDP 601 A 1 HETATM 2 O O1A NDP . . . E 2 6.378 -0.434 25.271 1 62.36 ? O1A NDP 601 A 1 HETATM 3 O O2A NDP . . . E 2 7.57 -2.66 25.406 1 48 ? O2A NDP 601 A 1 HETATM 4 O O5B NDP . . . E 2 7.451 -1.136 27.414 1 48.4 ? O5B NDP 601 A 1 HETATM 5 C C5B NDP . . . E 2 6.15 -0.773 27.933 1 47.27 ? C5B NDP 601 A 1 HETATM 6 C C4B NDP . . . E 2 6.122 -0.961 29.427 1 45.83 ? C4B NDP 601 A 1 HETATM 7 O O4B NDP . . . E 2 7.047 -2.012 29.802 1 46.01 ? O4B NDP 601 A 1 HETATM 8 C C3B NDP . . . E 2 6.524 0.259 30.264 1 43.56 ? C3B NDP 601 A 1 HETATM 9 O O3B NDP . . . E 2 5.699 0.334 31.417 1 38.05 ? O3B NDP 601 A 1 HETATM 10 C C2B NDP . . . E 2 7.974 -0.049 30.603 1 46.63 ? C2B NDP 601 A 1 HETATM 11 O O2B NDP . . . E 2 8.368 0.668 31.769 1 53.66 ? O2B NDP 601 A 1 HETATM 12 C C1B NDP . . . E 2 7.854 -1.545 30.854 1 44.59 ? C1B NDP 601 A 1 HETATM 13 N N9A NDP . . . E 2 9.115 -2.274 30.84 1 40.55 ? N9A NDP 601 A 1 HETATM 14 C C8A NDP . . . E 2 10.325 -1.805 30.403 1 40.3 ? C8A NDP 601 A 1 HETATM 15 N N7A NDP . . . E 2 11.291 -2.68 30.516 1 38.79 ? N7A NDP 601 A 1 HETATM 16 C C5A NDP . . . E 2 10.682 -3.797 31.063 1 35.27 ? C5A NDP 601 A 1 HETATM 17 C C6A NDP . . . E 2 11.179 -5.062 31.423 1 31.93 ? C6A NDP 601 A 1 HETATM 18 N N6A NDP . . . E 2 12.452 -5.418 31.284 1 31.36 ? N6A NDP 601 A 1 HETATM 19 N N1A NDP . . . E 2 10.304 -5.953 31.943 1 28.9 ? N1A NDP 601 A 1 HETATM 20 C C2A NDP . . . E 2 9.027 -5.582 32.083 1 28.46 ? C2A NDP 601 A 1 HETATM 21 N N3A NDP . . . E 2 8.45 -4.425 31.782 1 31.58 ? N3A NDP 601 A 1 HETATM 22 C C4A NDP . . . E 2 9.338 -3.56 31.269 1 36.01 ? C4A NDP 601 A 1 HETATM 23 O O3 NDP . . . E 2 8.88 -0.495 25.494 1 55.96 ? O3 NDP 601 A 1 HETATM 24 P PN NDP . . . E 2 9.146 0.908 24.767 1 56.22 ? PN NDP 601 A 1 HETATM 25 O O1N NDP . . . E 2 8.719 1.986 25.701 1 62 ? O1N NDP 601 A 1 HETATM 26 O O2N NDP . . . E 2 10.531 0.937 24.218 1 52.9 ? O2N NDP 601 A 1 HETATM 27 O O5D NDP . . . E 2 8.117 0.83 23.554 1 51.66 ? O5D NDP 601 A 1 HETATM 28 C C5D NDP . . . E 2 7.073 1.821 23.492 1 55.92 ? C5D NDP 601 A 1 HETATM 29 C C4D NDP . . . E 2 6.134 1.439 22.381 1 57.36 ? C4D NDP 601 A 1 HETATM 30 O O4D NDP . . . E 2 6.848 1.54 21.13 1 59.36 ? O4D NDP 601 A 1 HETATM 31 C C3D NDP . . . E 2 5.593 0.004 22.432 1 57.01 ? C3D NDP 601 A 1 HETATM 32 O O3D NDP . . . E 2 4.21 -0.004 22.761 1 52.04 ? O3D NDP 601 A 1 HETATM 33 C C2D NDP . . . E 2 5.87 -0.538 21.029 1 58.41 ? C2D NDP 601 A 1 HETATM 34 O O2D NDP . . . E 2 4.725 -1.183 20.501 1 56.79 ? O2D NDP 601 A 1 HETATM 35 C C1D NDP . . . E 2 6.242 0.686 20.206 1 62.73 ? C1D NDP 601 A 1 HETATM 36 N N1N NDP . . . E 2 7.217 0.402 19.116 1 62.93 ? N1N NDP 601 A 1 HETATM 37 C C2N NDP . . . E 2 7.687 -0.861 18.894 1 60.74 ? C2N NDP 601 A 1 HETATM 38 C C3N NDP . . . E 2 8.826 -1.059 18.176 1 66.23 ? C3N NDP 601 A 1 HETATM 39 C C7N NDP . . . E 2 9.219 -2.44 17.836 1 65.2 ? C7N NDP 601 A 1 HETATM 40 O O7N NDP . . . E 2 9.707 -2.681 16.727 1 61.2 ? O7N NDP 601 A 1 HETATM 41 N N7N NDP . . . E 2 9.043 -3.383 18.749 1 62.44 ? N7N NDP 601 A 1 HETATM 42 C C4N NDP . . . E 2 9.614 0.137 17.772 1 66.75 ? C4N NDP 601 A 1 HETATM 43 C C5N NDP . . . E 2 8.824 1.369 17.725 1 60.1 ? C5N NDP 601 A 1 HETATM 44 C C6N NDP . . . E 2 7.653 1.417 18.306 1 58.65 ? C6N NDP 601 A 1 HETATM 45 P P2B NDP . . . E 2 9.282 1.944 31.402 1 54.45 ? P2B NDP 601 A 1 HETATM 46 O O1X NDP . . . E 2 10.597 1.749 32.116 1 53.49 ? O1X NDP 601 A 1 HETATM 47 O O2X NDP . . . E 2 9.446 1.945 29.903 1 50.36 ? O2X NDP 601 A 1 HETATM 48 O O3X NDP . . . E 2 8.548 3.167 31.898 1 52.98 ? O3X NDP 601 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 345 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 48 #