data_7W5O
#
_model_server_result.job_id            uJlIqCX2WGkChVIgid2ymA 
_model_server_result.datetime_utc      '2024-12-03 20:28:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7w5o 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":405}' 
#
_entry.id    7W5O 
#
_exptl.entry_id    7W5O 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              118.088 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SUCCINIC ACID' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7W5O 
_cell.length_a            82.812 
_cell.length_b            82.812 
_cell.length_c            274.44 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7W5O 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    'P 4abw 2nw' 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,J,Q 1 1 
B,K,L,M,N,O,P,R 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ASP 132 A ASP 124 1_555 A N NEP 133 A NEP 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? 
covale ? covale2 A C NEP 133 A NEP 125 1_555 A N ILE 134 A ILE 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale3 B C ASP 132 B ASP 124 1_555 B N NEP 133 B NEP 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? 
covale ? covale4 B C NEP 133 B NEP 125 1_555 B N ILE 134 B ILE 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? 
#
_chem_comp.formula           'C4 H6 O4' 
_chem_comp.formula_weight    118.088 
_chem_comp.id                SIN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SUCCINIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 SIN doub 458 n n 
C1 O2 SIN sing 459 n n 
C1 C2 SIN sing 460 n n 
O2 HO2 SIN sing 461 n n 
C2 C3 SIN sing 462 n n 
C2 H21 SIN sing 463 n n 
C2 H22 SIN sing 464 n n 
C3 C4 SIN sing 465 n n 
C3 H31 SIN sing 466 n n 
C3 H32 SIN sing 467 n n 
C4 O3 SIN doub 468 n n 
C4 O4 SIN sing 469 n n 
O4 HO4 SIN sing 470 n n 
#
_atom_sites.entry_id                     7W5O 
_atom_sites.fract_transf_matrix[1][1]    0.012076 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012076 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003644 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 5ID A 1 401 401 5ID 5ID . 
D 3 MLA A 1 402 501 MLA MLA . 
E 4 SIN A 1 403 701 SIN SIN . 
F 5 NA A 1 404 901 NA NA . 
G 4 SIN A 1 405 1001 SIN SIN . 
H 3 MLA A 1 406 1101 MLA MLA . 
I 3 MLA A 1 407 1201 MLA MLA . 
J 6 EPE A 1 408 1301 EPE EPE . 
K 3 MLA B 1 601 601 MLA MLA . 
L 7 TAR B 1 602 801 TAR TAR . 
M 3 MLA B 1 603 1001 MLA MLA . 
N 3 MLA B 1 604 1101 MLA MLA . 
O 6 EPE B 1 605 1201 EPE EPE . 
P 8 6GI B 1 606 1301 6GI HT3 . 
Q 9 HOH A 1 501 71 HOH HOH . 
Q 9 HOH A 2 502 98 HOH HOH . 
Q 9 HOH A 3 503 88 HOH HOH . 
Q 9 HOH A 4 504 95 HOH HOH . 
Q 9 HOH A 5 505 26 HOH HOH . 
Q 9 HOH A 6 506 19 HOH HOH . 
Q 9 HOH A 7 507 2 HOH HOH . 
Q 9 HOH A 8 508 28 HOH HOH . 
Q 9 HOH A 9 509 18 HOH HOH . 
Q 9 HOH A 10 510 84 HOH HOH . 
Q 9 HOH A 11 511 24 HOH HOH . 
Q 9 HOH A 12 512 92 HOH HOH . 
Q 9 HOH A 13 513 110 HOH HOH . 
Q 9 HOH A 14 514 29 HOH HOH . 
Q 9 HOH A 15 515 15 HOH HOH . 
Q 9 HOH A 16 516 17 HOH HOH . 
Q 9 HOH A 17 517 5 HOH HOH . 
Q 9 HOH A 18 518 11 HOH HOH . 
Q 9 HOH A 19 519 9 HOH HOH . 
Q 9 HOH A 20 520 3 HOH HOH . 
Q 9 HOH A 21 521 25 HOH HOH . 
Q 9 HOH A 22 522 70 HOH HOH . 
Q 9 HOH A 23 523 66 HOH HOH . 
Q 9 HOH A 24 524 41 HOH HOH . 
Q 9 HOH A 25 525 30 HOH HOH . 
Q 9 HOH A 26 526 115 HOH HOH . 
Q 9 HOH A 27 527 56 HOH HOH . 
Q 9 HOH A 28 528 22 HOH HOH . 
Q 9 HOH A 29 529 6 HOH HOH . 
Q 9 HOH A 30 530 52 HOH HOH . 
Q 9 HOH A 31 531 114 HOH HOH . 
Q 9 HOH A 32 532 4 HOH HOH . 
Q 9 HOH A 33 533 16 HOH HOH . 
Q 9 HOH A 34 534 34 HOH HOH . 
Q 9 HOH A 35 535 53 HOH HOH . 
Q 9 HOH A 36 536 31 HOH HOH . 
Q 9 HOH A 37 537 1 HOH HOH . 
Q 9 HOH A 38 538 36 HOH HOH . 
Q 9 HOH A 39 539 8 HOH HOH . 
Q 9 HOH A 40 540 39 HOH HOH . 
Q 9 HOH A 41 541 118 HOH HOH . 
Q 9 HOH A 42 542 58 HOH HOH . 
Q 9 HOH A 43 543 94 HOH HOH . 
Q 9 HOH A 44 544 27 HOH HOH . 
Q 9 HOH A 45 545 99 HOH HOH . 
Q 9 HOH A 46 546 101 HOH HOH . 
Q 9 HOH A 47 547 112 HOH HOH . 
Q 9 HOH A 48 548 85 HOH HOH . 
Q 9 HOH A 49 549 57 HOH HOH . 
Q 9 HOH A 50 550 87 HOH HOH . 
Q 9 HOH A 51 551 91 HOH HOH . 
Q 9 HOH A 52 552 45 HOH HOH . 
Q 9 HOH A 53 553 48 HOH HOH . 
Q 9 HOH A 54 554 67 HOH HOH . 
Q 9 HOH A 55 555 32 HOH HOH . 
Q 9 HOH A 56 556 47 HOH HOH . 
Q 9 HOH A 57 557 43 HOH HOH . 
Q 9 HOH A 58 558 93 HOH HOH . 
Q 9 HOH A 59 559 100 HOH HOH . 
Q 9 HOH A 60 560 86 HOH HOH . 
Q 9 HOH A 61 561 50 HOH HOH . 
Q 9 HOH A 62 562 97 HOH HOH . 
Q 9 HOH A 63 563 83 HOH HOH . 
Q 9 HOH A 64 564 37 HOH HOH . 
Q 9 HOH A 65 565 33 HOH HOH . 
Q 9 HOH A 66 566 89 HOH HOH . 
Q 9 HOH A 67 567 44 HOH HOH . 
Q 9 HOH A 68 568 23 HOH HOH . 
Q 9 HOH A 69 569 103 HOH HOH . 
Q 9 HOH A 70 570 7 HOH HOH . 
Q 9 HOH A 71 571 96 HOH HOH . 
R 9 HOH B 1 701 68 HOH HOH . 
R 9 HOH B 2 702 119 HOH HOH . 
R 9 HOH B 3 703 72 HOH HOH . 
R 9 HOH B 4 704 49 HOH HOH . 
R 9 HOH B 5 705 80 HOH HOH . 
R 9 HOH B 6 706 61 HOH HOH . 
R 9 HOH B 7 707 38 HOH HOH . 
R 9 HOH B 8 708 54 HOH HOH . 
R 9 HOH B 9 709 12 HOH HOH . 
R 9 HOH B 10 710 64 HOH HOH . 
R 9 HOH B 11 711 14 HOH HOH . 
R 9 HOH B 12 712 76 HOH HOH . 
R 9 HOH B 13 713 63 HOH HOH . 
R 9 HOH B 14 714 20 HOH HOH . 
R 9 HOH B 15 715 77 HOH HOH . 
R 9 HOH B 16 716 10 HOH HOH . 
R 9 HOH B 17 717 113 HOH HOH . 
R 9 HOH B 18 718 21 HOH HOH . 
R 9 HOH B 19 719 78 HOH HOH . 
R 9 HOH B 20 720 107 HOH HOH . 
R 9 HOH B 21 721 62 HOH HOH . 
R 9 HOH B 22 722 65 HOH HOH . 
R 9 HOH B 23 723 55 HOH HOH . 
R 9 HOH B 24 724 106 HOH HOH . 
R 9 HOH B 25 725 74 HOH HOH . 
R 9 HOH B 26 726 81 HOH HOH . 
R 9 HOH B 27 727 46 HOH HOH . 
R 9 HOH B 28 728 111 HOH HOH . 
R 9 HOH B 29 729 51 HOH HOH . 
R 9 HOH B 30 730 79 HOH HOH . 
R 9 HOH B 31 731 13 HOH HOH . 
R 9 HOH B 32 732 104 HOH HOH . 
R 9 HOH B 33 733 59 HOH HOH . 
R 9 HOH B 34 734 90 HOH HOH . 
R 9 HOH B 35 735 82 HOH HOH . 
R 9 HOH B 36 736 60 HOH HOH . 
R 9 HOH B 37 737 75 HOH HOH . 
R 9 HOH B 38 738 105 HOH HOH . 
R 9 HOH B 39 739 69 HOH HOH . 
R 9 HOH B 40 740 102 HOH HOH . 
R 9 HOH B 41 741 117 HOH HOH . 
R 9 HOH B 42 742 73 HOH HOH . 
R 9 HOH B 43 743 108 HOH HOH . 
R 9 HOH B 44 744 42 HOH HOH . 
R 9 HOH B 45 745 116 HOH HOH . 
R 9 HOH B 46 746 109 HOH HOH . 
R 9 HOH B 47 747 35 HOH HOH . 
R 9 HOH B 48 748 40 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 SIN . . . G 4 14.808 -21.052 -31.186 1 74.15 ? C1 SIN 405 A 1 
HETATM 2 O O1 SIN . . . G 4 15.637 -20.166 -31.522 1 83.28 ? O1 SIN 405 A 1 
HETATM 3 O O2 SIN . . . G 4 14.248 -20.934 -30.071 1 77.92 ? O2 SIN 405 A 1 
HETATM 4 C C2 SIN . . . G 4 14.479 -22.23 -32.096 1 70.25 ? C2 SIN 405 A 1 
HETATM 5 C C3 SIN . . . G 4 15.457 -22.315 -33.274 1 73.58 ? C3 SIN 405 A 1 
HETATM 6 C C4 SIN . . . G 4 15.041 -23.364 -34.3 1 72.38 ? C4 SIN 405 A 1 
HETATM 7 O O3 SIN . . . G 4 14.987 -23.094 -35.532 1 76.48 ? O3 SIN 405 A 1 
HETATM 8 O O4 SIN . . . G 4 14.753 -24.529 -33.929 1 64.28 ? O4 SIN 405 A 1 
HETATM 9 H H21 SIN . . . G 4 13.463 -22.121 -32.476 1 84.3 ? H21 SIN 405 A 1 
HETATM 10 H H22 SIN . . . G 4 14.523 -23.155 -31.521 1 84.3 ? H22 SIN 405 A 1 
HETATM 11 H H31 SIN . . . G 4 16.45 -22.56 -32.896 1 88.3 ? H31 SIN 405 A 1 
HETATM 12 H H32 SIN . . . G 4 15.514 -21.342 -33.761 1 88.3 ? H32 SIN 405 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           29 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           559 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           12 
#