data_7W8M # _model_server_result.job_id BK80zuNslJTPbJ4Bep1PXQ _model_server_result.datetime_utc '2024-11-27 16:48:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7w8m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 7W8M # _exptl.entry_id 7W8M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7W8M _cell.length_a 65.517 _cell.length_b 65.517 _cell.length_c 183.754 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7W8M _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 x-y,-y,-z+1/3 1 0 0 0 -1 0 0 0 -1 0 0 61.251333 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LEU 110 A LEU 110 1_555 A N CSD 111 A CSD 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale2 A C CSD 111 A CSD 111 1_555 A N SER 112 A SER 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale3 A C SER 112 A SER 112 1_555 A N CSO 113 A CSO 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale4 A C CSO 113 A CSO 113 1_555 A N TYR 114 A TYR 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? metalc ? metalc1 A N SER 112 A SER 112 1_555 C CO CO . A CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? metalc ? metalc2 A N CSO 113 A CSO 113 1_555 C CO CO . A CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? # _chem_comp.formula 'Co 2' _chem_comp.formula_weight 58.933 _chem_comp.id CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7W8M _atom_sites.fract_transf_matrix[1][1] 0.015263 _atom_sites.fract_transf_matrix[1][2] 0.008812 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017624 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005442 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CO A 1 301 1 CO CO . D 4 HOH A 1 401 78 HOH HOH . D 4 HOH A 2 402 45 HOH HOH . D 4 HOH A 3 403 55 HOH HOH . D 4 HOH A 4 404 47 HOH HOH . D 4 HOH A 5 405 6 HOH HOH . D 4 HOH A 6 406 123 HOH HOH . D 4 HOH A 7 407 3 HOH HOH . D 4 HOH A 8 408 44 HOH HOH . D 4 HOH A 9 409 13 HOH HOH . D 4 HOH A 10 410 69 HOH HOH . D 4 HOH A 11 411 27 HOH HOH . D 4 HOH A 12 412 109 HOH HOH . D 4 HOH A 13 413 84 HOH HOH . D 4 HOH A 14 414 4 HOH HOH . D 4 HOH A 15 415 79 HOH HOH . D 4 HOH A 16 416 97 HOH HOH . D 4 HOH A 17 417 121 HOH HOH . D 4 HOH A 18 418 23 HOH HOH . D 4 HOH A 19 419 46 HOH HOH . D 4 HOH A 20 420 53 HOH HOH . D 4 HOH A 21 421 17 HOH HOH . D 4 HOH A 22 422 112 HOH HOH . D 4 HOH A 23 423 114 HOH HOH . D 4 HOH A 24 424 43 HOH HOH . D 4 HOH A 25 425 28 HOH HOH . D 4 HOH A 26 426 21 HOH HOH . D 4 HOH A 27 427 30 HOH HOH . D 4 HOH A 28 428 60 HOH HOH . D 4 HOH A 29 429 25 HOH HOH . D 4 HOH A 30 430 126 HOH HOH . D 4 HOH A 31 431 74 HOH HOH . D 4 HOH A 32 432 102 HOH HOH . D 4 HOH A 33 433 95 HOH HOH . D 4 HOH A 34 434 104 HOH HOH . D 4 HOH A 35 435 56 HOH HOH . D 4 HOH A 36 436 83 HOH HOH . D 4 HOH A 37 437 86 HOH HOH . D 4 HOH A 38 438 48 HOH HOH . D 4 HOH A 39 439 125 HOH HOH . D 4 HOH A 40 440 80 HOH HOH . D 4 HOH A 41 441 85 HOH HOH . D 4 HOH A 42 442 90 HOH HOH . D 4 HOH A 43 443 127 HOH HOH . D 4 HOH A 44 444 91 HOH HOH . D 4 HOH A 45 445 110 HOH HOH . D 4 HOH A 46 446 66 HOH HOH . D 4 HOH A 47 447 50 HOH HOH . E 4 HOH B 1 301 103 HOH HOH . E 4 HOH B 2 302 117 HOH HOH . E 4 HOH B 3 303 113 HOH HOH . E 4 HOH B 4 304 33 HOH HOH . E 4 HOH B 5 305 1 HOH HOH . E 4 HOH B 6 306 115 HOH HOH . E 4 HOH B 7 307 10 HOH HOH . E 4 HOH B 8 308 26 HOH HOH . E 4 HOH B 9 309 39 HOH HOH . E 4 HOH B 10 310 5 HOH HOH . E 4 HOH B 11 311 59 HOH HOH . E 4 HOH B 12 312 18 HOH HOH . E 4 HOH B 13 313 64 HOH HOH . E 4 HOH B 14 314 40 HOH HOH . E 4 HOH B 15 315 65 HOH HOH . E 4 HOH B 16 316 89 HOH HOH . E 4 HOH B 17 317 11 HOH HOH . E 4 HOH B 18 318 35 HOH HOH . E 4 HOH B 19 319 19 HOH HOH . E 4 HOH B 20 320 12 HOH HOH . E 4 HOH B 21 321 41 HOH HOH . E 4 HOH B 22 322 2 HOH HOH . E 4 HOH B 23 323 31 HOH HOH . E 4 HOH B 24 324 93 HOH HOH . E 4 HOH B 25 325 106 HOH HOH . E 4 HOH B 26 326 72 HOH HOH . E 4 HOH B 27 327 42 HOH HOH . E 4 HOH B 28 328 61 HOH HOH . E 4 HOH B 29 329 62 HOH HOH . E 4 HOH B 30 330 108 HOH HOH . E 4 HOH B 31 331 34 HOH HOH . E 4 HOH B 32 332 22 HOH HOH . E 4 HOH B 33 333 116 HOH HOH . E 4 HOH B 34 334 99 HOH HOH . E 4 HOH B 35 335 63 HOH HOH . E 4 HOH B 36 336 58 HOH HOH . E 4 HOH B 37 337 57 HOH HOH . E 4 HOH B 38 338 75 HOH HOH . E 4 HOH B 39 339 107 HOH HOH . E 4 HOH B 40 340 51 HOH HOH . E 4 HOH B 41 341 29 HOH HOH . E 4 HOH B 42 342 88 HOH HOH . E 4 HOH B 43 343 101 HOH HOH . E 4 HOH B 44 344 119 HOH HOH . E 4 HOH B 45 345 87 HOH HOH . E 4 HOH B 46 346 15 HOH HOH . E 4 HOH B 47 347 81 HOH HOH . E 4 HOH B 48 348 96 HOH HOH . E 4 HOH B 49 349 36 HOH HOH . E 4 HOH B 50 350 52 HOH HOH . E 4 HOH B 51 351 82 HOH HOH . E 4 HOH B 52 352 120 HOH HOH . E 4 HOH B 53 353 67 HOH HOH . E 4 HOH B 54 354 92 HOH HOH . E 4 HOH B 55 355 98 HOH HOH . E 4 HOH B 56 356 124 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id CO _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 36.765 _atom_site.Cartn_y -10.402 _atom_site.Cartn_z 16.893 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 24.76 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id CO _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 455 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #