data_7W9S # _model_server_result.job_id H9qavl7R2QIuat7ImPstFw _model_server_result.datetime_utc '2024-10-19 11:24:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7w9s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":506}' # _entry.id 7W9S # _exptl.entry_id 7W9S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7W9S _cell.length_a 63.992 _cell.length_b 77.663 _cell.length_c 150.831 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7W9S _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 I N N ? 7 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 233 A ASP 233 1_555 I MG MG . A MG 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.436 ? metalc ? metalc2 A OD2 ASP 233 A ASP 233 1_555 J MG MG . A MG 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? metalc ? metalc3 A O TYR 234 A TYR 234 1_555 J MG MG . A MG 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc4 A NE2 HIS 271 A HIS 271 1_555 H ZN ZN . A ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? metalc ? metalc5 A NE2 HIS 273 A HIS 273 1_555 H ZN ZN . A ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? metalc ? metalc6 A SG CYS 282 A CYS 282 1_555 H ZN ZN . A ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? metalc ? metalc7 A OD1 ASP 329 A ASP 329 1_555 I MG MG . A MG 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? metalc ? metalc8 A OD2 ASP 329 A ASP 329 1_555 J MG MG . A MG 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc9 A OD2 ASP 330 A ASP 330 1_555 I MG MG . A MG 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc10 A OE2 GLU 343 A GLU 343 1_555 H ZN ZN . A ZN 505 4_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc11 D O1A CTP . A CTP 501 1_555 I MG MG . A MG 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.515 ? metalc ? metalc12 D O1A CTP . A CTP 501 1_555 J MG MG . A MG 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc13 D O2B CTP . A CTP 501 1_555 J MG MG . A MG 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.962 ? metalc ? metalc14 D O2G CTP . A CTP 501 1_555 J MG MG . A MG 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.569 ? metalc ? metalc15 I MG MG . A MG 506 1_555 C O3' A 16 C A 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.617 ? hydrog WATSON-CRICK hydrog1 B N3 U 21 B U 601 1_555 C N1 A 16 C A 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 B O4 U 21 B U 601 1_555 C N6 A 16 C A 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 B N3 C 22 B C 602 1_555 C N1 G 15 C G 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 B N4 C 22 B C 602 1_555 C O6 G 15 C G 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 B O2 C 22 B C 602 1_555 C N2 G 15 C G 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 B N3 U 23 B U 603 1_555 C N1 A 14 C A 699 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 B O4 U 23 B U 603 1_555 C N6 A 14 C A 699 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 B N3 C 24 B C 604 1_555 C N1 G 13 C G 698 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 B N4 C 24 B C 604 1_555 C O6 G 13 C G 698 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 B O2 C 24 B C 604 1_555 C N2 G 13 C G 698 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 B N3 U 25 B U 605 1_555 C N1 A 12 C A 697 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 B O4 U 25 B U 605 1_555 C N6 A 12 C A 697 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 B N3 C 26 B C 606 1_555 C N1 G 11 C G 696 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 B N4 C 26 B C 606 1_555 C O6 G 11 C G 696 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 B O2 C 26 B C 606 1_555 C N2 G 11 C G 696 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 B N3 U 27 B U 607 1_555 C N1 A 10 C A 695 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 B O4 U 27 B U 607 1_555 C N6 A 10 C A 695 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 B N3 C 28 B C 608 1_555 C N1 G 9 C G 694 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 B N4 C 28 B C 608 1_555 C O6 G 9 C G 694 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 B O2 C 28 B C 608 1_555 C N2 G 9 C G 694 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 B N1 G 29 B G 609 1_555 C N3 C 8 C C 693 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 B N2 G 29 B G 609 1_555 C O2 C 8 C C 693 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 B O6 G 29 B G 609 1_555 C N4 C 8 C C 693 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'U-A PAIR' hydrog24 B N3 U 30 B U 610 1_555 C N1 A 7 C A 692 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7W9S _atom_sites.fract_transf_matrix[1][1] 0.015627 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012876 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00663 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 CTP A 1 501 702 CTP CTP . E 5 SO4 A 1 502 7 SO4 SO4 . F 5 SO4 A 1 503 9 SO4 SO4 . G 5 SO4 A 1 504 10 SO4 SO4 . H 6 ZN A 1 505 2 ZN ZN . I 7 MG A 1 506 1 MG MG . J 7 MG A 1 507 2 MG MG . K 8 HOH A 1 601 3 HOH HOH . K 8 HOH A 2 602 11 HOH HOH . K 8 HOH A 3 603 18 HOH HOH . K 8 HOH A 4 604 24 HOH HOH . K 8 HOH A 5 605 28 HOH HOH . K 8 HOH A 6 606 4 HOH HOH . K 8 HOH A 7 607 27 HOH HOH . K 8 HOH A 8 608 15 HOH HOH . K 8 HOH A 9 609 25 HOH HOH . K 8 HOH A 10 610 16 HOH HOH . K 8 HOH A 11 611 20 HOH HOH . K 8 HOH A 12 612 14 HOH HOH . K 8 HOH A 13 613 13 HOH HOH . K 8 HOH A 14 614 21 HOH HOH . K 8 HOH A 15 615 26 HOH HOH . L 8 HOH B 1 701 12 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 7 _atom_site.Cartn_x -6.694 _atom_site.Cartn_y -13.215 _atom_site.Cartn_z 14.912 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 65.96 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 506 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #