data_7WAQ
#
_model_server_result.job_id            -0MiDvGuwJbXBtgNNTgffA 
_model_server_result.datetime_utc      '2024-11-23 01:16:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7waq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":402}' 
#
_entry.id    7WAQ 
#
_exptl.entry_id    7WAQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7WAQ 
_cell.length_a            97.485 
_cell.length_b            111.733 
_cell.length_c            131.102 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7WAQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
D,L,M,N,R 1 1 
A,E,F,O 1 2 
B,C,G,H,I,J,K,P,Q 2 1 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 3_444 -x-1,y-1/2,-z-1/2 -1 0 0 0 1 0 0 0 -1 -97.485 -55.8665 -65.551 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 H N N 
? 3 J N N 
? 3 K N N 
? 3 M N N 
? 3 N N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 113 B CYS 114 1_555 A SG CYS 114 B CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? 
disulf ? disulf2 B SG CYS 113 A CYS 114 1_555 B SG CYS 114 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? 
disulf ? disulf3 C SG CYS 113 C CYS 114 1_555 C SG CYS 114 C CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.17 ? 
disulf ? disulf4 D SG CYS 113 D CYS 114 1_555 D SG CYS 114 D CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.184 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     7WAQ 
_atom_sites.fract_transf_matrix[1][1]    0.010258 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00895 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007628 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 STL B 1 401 401 STL STL . 
F 3 EDO B 1 402 402 EDO EDO . 
G 2 STL A 1 401 401 STL STL . 
H 3 EDO A 1 402 402 EDO EDO . 
I 2 STL C 1 401 401 STL STL . 
J 3 EDO C 1 402 402 EDO EDO . 
K 3 EDO C 1 403 403 EDO EDO . 
L 2 STL D 1 401 401 STL STL . 
M 3 EDO D 1 402 402 EDO EDO . 
N 3 EDO D 1 403 403 EDO EDO . 
O 4 HOH B 1 501 36 HOH HOH . 
O 4 HOH B 2 502 58 HOH HOH . 
O 4 HOH B 3 503 43 HOH HOH . 
O 4 HOH B 4 504 66 HOH HOH . 
O 4 HOH B 5 505 18 HOH HOH . 
O 4 HOH B 6 506 71 HOH HOH . 
O 4 HOH B 7 507 16 HOH HOH . 
O 4 HOH B 8 508 34 HOH HOH . 
O 4 HOH B 9 509 8 HOH HOH . 
O 4 HOH B 10 510 17 HOH HOH . 
O 4 HOH B 11 511 11 HOH HOH . 
O 4 HOH B 12 512 70 HOH HOH . 
O 4 HOH B 13 513 72 HOH HOH . 
O 4 HOH B 14 514 59 HOH HOH . 
O 4 HOH B 15 515 76 HOH HOH . 
O 4 HOH B 16 516 10 HOH HOH . 
O 4 HOH B 17 517 19 HOH HOH . 
O 4 HOH B 18 518 13 HOH HOH . 
O 4 HOH B 19 519 5 HOH HOH . 
P 4 HOH A 1 501 42 HOH HOH . 
P 4 HOH A 2 502 63 HOH HOH . 
P 4 HOH A 3 503 38 HOH HOH . 
P 4 HOH A 4 504 28 HOH HOH . 
P 4 HOH A 5 505 27 HOH HOH . 
P 4 HOH A 6 506 41 HOH HOH . 
P 4 HOH A 7 507 14 HOH HOH . 
P 4 HOH A 8 508 30 HOH HOH . 
P 4 HOH A 9 509 50 HOH HOH . 
P 4 HOH A 10 510 73 HOH HOH . 
P 4 HOH A 11 511 44 HOH HOH . 
P 4 HOH A 12 512 51 HOH HOH . 
P 4 HOH A 13 513 77 HOH HOH . 
P 4 HOH A 14 514 64 HOH HOH . 
P 4 HOH A 15 515 45 HOH HOH . 
P 4 HOH A 16 516 22 HOH HOH . 
P 4 HOH A 17 517 65 HOH HOH . 
P 4 HOH A 18 518 15 HOH HOH . 
Q 4 HOH C 1 501 54 HOH HOH . 
Q 4 HOH C 2 502 26 HOH HOH . 
Q 4 HOH C 3 503 25 HOH HOH . 
Q 4 HOH C 4 504 32 HOH HOH . 
Q 4 HOH C 5 505 37 HOH HOH . 
Q 4 HOH C 6 506 24 HOH HOH . 
Q 4 HOH C 7 507 56 HOH HOH . 
Q 4 HOH C 8 508 35 HOH HOH . 
Q 4 HOH C 9 509 57 HOH HOH . 
Q 4 HOH C 10 510 46 HOH HOH . 
Q 4 HOH C 11 511 23 HOH HOH . 
Q 4 HOH C 12 512 6 HOH HOH . 
Q 4 HOH C 13 513 21 HOH HOH . 
Q 4 HOH C 14 514 20 HOH HOH . 
Q 4 HOH C 15 515 29 HOH HOH . 
Q 4 HOH C 16 516 31 HOH HOH . 
R 4 HOH D 1 501 33 HOH HOH . 
R 4 HOH D 2 502 47 HOH HOH . 
R 4 HOH D 3 503 49 HOH HOH . 
R 4 HOH D 4 504 62 HOH HOH . 
R 4 HOH D 5 505 40 HOH HOH . 
R 4 HOH D 6 506 69 HOH HOH . 
R 4 HOH D 7 507 75 HOH HOH . 
R 4 HOH D 8 508 74 HOH HOH . 
R 4 HOH D 9 509 48 HOH HOH . 
R 4 HOH D 10 510 67 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . J 3 -70.866 20.397 21.679 1 78.97 0 C1 EDO 402 C 1 
HETATM 2 O O1 EDO . . . J 3 -70.21 20.526 23.001 1 71.34 0 O1 EDO 402 C 1 
HETATM 3 C C2 EDO . . . J 3 -71.822 21.517 21.086 1 71.61 0 C2 EDO 402 C 1 
HETATM 4 O O2 EDO . . . J 3 -73.221 21.255 20.767 1 58.76 0 O2 EDO 402 C 1 
#
_model_server_stats.io_time_ms              57 
_model_server_stats.parse_time_ms           46 
_model_server_stats.create_model_time_ms    72 
_model_server_stats.query_time_ms           969 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           4 
#