data_7WAS # _model_server_result.job_id 2iLizBhyQfgRf9KqSMa8ng _model_server_result.datetime_utc '2024-11-13 13:38:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7was # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":405}' # _entry.id 7WAS # _exptl.entry_id 7WAS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7WAS _cell.length_a 96.469 _cell.length_b 96.469 _cell.length_c 169.43 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WAS _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 I N N ? 7 J N N ? 7 O N N ? 7 P N N ? 7 U N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 113 A CYS 114 1_555 A SG CYS 114 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? disulf ? disulf2 B SG CYS 113 B CYS 114 1_555 B SG CYS 114 B CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 119 n n C1 C2 EDO sing 120 n n C1 H11 EDO sing 121 n n C1 H12 EDO sing 122 n n O1 HO1 EDO sing 123 n n C2 O2 EDO sing 124 n n C2 H21 EDO sing 125 n n C2 H22 EDO sing 126 n n O2 HO2 EDO sing 127 n n # _atom_sites.entry_id 7WAS _atom_sites.fract_transf_matrix[1][1] 0.010366 _atom_sites.fract_transf_matrix[1][2] 0.005985 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01197 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005902 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 3RL A 1 401 401 3RL 3RL . D 3 NAD A 1 402 402 NAD NAD . E 4 GOL A 1 403 403 GOL GOL . F 4 GOL A 1 404 405 GOL GOL . G 5 PG4 A 1 405 406 PG4 PG4 . H 6 PEG A 1 406 407 PEG PEG . I 7 EDO A 1 407 408 EDO EDO . J 7 EDO A 1 408 409 EDO EDO . K 4 GOL B 1 401 404 GOL GOL . L 2 3RL B 1 402 401 3RL 3RL . M 3 NAD B 1 403 402 NAD NAD . N 4 GOL B 1 404 403 GOL GOL . O 7 EDO B 1 405 404 EDO EDO . P 7 EDO B 1 406 405 EDO EDO . Q 4 GOL B 1 407 406 GOL GOL . R 4 GOL B 1 408 408 GOL GOL . S 4 GOL B 1 409 409 GOL GOL . T 4 GOL B 1 410 410 GOL GOL . U 7 EDO B 1 411 411 EDO EDO . V 8 HOH A 1 501 73 HOH HOH . V 8 HOH A 2 502 84 HOH HOH . V 8 HOH A 3 503 81 HOH HOH . V 8 HOH A 4 504 47 HOH HOH . V 8 HOH A 5 505 31 HOH HOH . V 8 HOH A 6 506 122 HOH HOH . V 8 HOH A 7 507 55 HOH HOH . V 8 HOH A 8 508 40 HOH HOH . V 8 HOH A 9 509 68 HOH HOH . V 8 HOH A 10 510 23 HOH HOH . V 8 HOH A 11 511 83 HOH HOH . V 8 HOH A 12 512 94 HOH HOH . V 8 HOH A 13 513 17 HOH HOH . V 8 HOH A 14 514 136 HOH HOH . V 8 HOH A 15 515 125 HOH HOH . V 8 HOH A 16 516 148 HOH HOH . V 8 HOH A 17 517 77 HOH HOH . V 8 HOH A 18 518 60 HOH HOH . V 8 HOH A 19 519 172 HOH HOH . V 8 HOH A 20 520 37 HOH HOH . V 8 HOH A 21 521 153 HOH HOH . V 8 HOH A 22 522 70 HOH HOH . V 8 HOH A 23 523 152 HOH HOH . V 8 HOH A 24 524 26 HOH HOH . V 8 HOH A 25 525 156 HOH HOH . V 8 HOH A 26 526 170 HOH HOH . V 8 HOH A 27 527 14 HOH HOH . V 8 HOH A 28 528 177 HOH HOH . V 8 HOH A 29 529 141 HOH HOH . V 8 HOH A 30 530 86 HOH HOH . V 8 HOH A 31 531 159 HOH HOH . V 8 HOH A 32 532 90 HOH HOH . V 8 HOH A 33 533 92 HOH HOH . V 8 HOH A 34 534 59 HOH HOH . V 8 HOH A 35 535 50 HOH HOH . V 8 HOH A 36 536 176 HOH HOH . V 8 HOH A 37 537 34 HOH HOH . V 8 HOH A 38 538 43 HOH HOH . V 8 HOH A 39 539 140 HOH HOH . V 8 HOH A 40 540 112 HOH HOH . V 8 HOH A 41 541 147 HOH HOH . V 8 HOH A 42 542 57 HOH HOH . V 8 HOH A 43 543 154 HOH HOH . V 8 HOH A 44 544 7 HOH HOH . V 8 HOH A 45 545 151 HOH HOH . V 8 HOH A 46 546 118 HOH HOH . V 8 HOH A 47 547 16 HOH HOH . V 8 HOH A 48 548 36 HOH HOH . V 8 HOH A 49 549 91 HOH HOH . V 8 HOH A 50 550 78 HOH HOH . V 8 HOH A 51 551 51 HOH HOH . V 8 HOH A 52 552 161 HOH HOH . V 8 HOH A 53 553 146 HOH HOH . V 8 HOH A 54 554 120 HOH HOH . V 8 HOH A 55 555 8 HOH HOH . V 8 HOH A 56 556 110 HOH HOH . V 8 HOH A 57 557 149 HOH HOH . V 8 HOH A 58 558 85 HOH HOH . V 8 HOH A 59 559 157 HOH HOH . V 8 HOH A 60 560 15 HOH HOH . V 8 HOH A 61 561 114 HOH HOH . V 8 HOH A 62 562 18 HOH HOH . V 8 HOH A 63 563 126 HOH HOH . V 8 HOH A 64 564 63 HOH HOH . V 8 HOH A 65 565 108 HOH HOH . V 8 HOH A 66 566 29 HOH HOH . V 8 HOH A 67 567 1 HOH HOH . V 8 HOH A 68 568 167 HOH HOH . V 8 HOH A 69 569 129 HOH HOH . V 8 HOH A 70 570 79 HOH HOH . V 8 HOH A 71 571 160 HOH HOH . V 8 HOH A 72 572 111 HOH HOH . V 8 HOH A 73 573 158 HOH HOH . V 8 HOH A 74 574 128 HOH HOH . V 8 HOH A 75 575 41 HOH HOH . V 8 HOH A 76 576 95 HOH HOH . V 8 HOH A 77 577 12 HOH HOH . V 8 HOH A 78 578 105 HOH HOH . V 8 HOH A 79 579 139 HOH HOH . W 8 HOH B 1 501 87 HOH HOH . W 8 HOH B 2 502 119 HOH HOH . W 8 HOH B 3 503 142 HOH HOH . W 8 HOH B 4 504 30 HOH HOH . W 8 HOH B 5 505 103 HOH HOH . W 8 HOH B 6 506 28 HOH HOH . W 8 HOH B 7 507 61 HOH HOH . W 8 HOH B 8 508 132 HOH HOH . W 8 HOH B 9 509 124 HOH HOH . W 8 HOH B 10 510 174 HOH HOH . W 8 HOH B 11 511 49 HOH HOH . W 8 HOH B 12 512 80 HOH HOH . W 8 HOH B 13 513 72 HOH HOH . W 8 HOH B 14 514 171 HOH HOH . W 8 HOH B 15 515 38 HOH HOH . W 8 HOH B 16 516 69 HOH HOH . W 8 HOH B 17 517 150 HOH HOH . W 8 HOH B 18 518 127 HOH HOH . W 8 HOH B 19 519 134 HOH HOH . W 8 HOH B 20 520 162 HOH HOH . W 8 HOH B 21 521 39 HOH HOH . W 8 HOH B 22 522 168 HOH HOH . W 8 HOH B 23 523 21 HOH HOH . W 8 HOH B 24 524 88 HOH HOH . W 8 HOH B 25 525 164 HOH HOH . W 8 HOH B 26 526 54 HOH HOH . W 8 HOH B 27 527 135 HOH HOH . W 8 HOH B 28 528 144 HOH HOH . W 8 HOH B 29 529 44 HOH HOH . W 8 HOH B 30 530 123 HOH HOH . W 8 HOH B 31 531 75 HOH HOH . W 8 HOH B 32 532 65 HOH HOH . W 8 HOH B 33 533 137 HOH HOH . W 8 HOH B 34 534 67 HOH HOH . W 8 HOH B 35 535 25 HOH HOH . W 8 HOH B 36 536 133 HOH HOH . W 8 HOH B 37 537 179 HOH HOH . W 8 HOH B 38 538 99 HOH HOH . W 8 HOH B 39 539 145 HOH HOH . W 8 HOH B 40 540 45 HOH HOH . W 8 HOH B 41 541 117 HOH HOH . W 8 HOH B 42 542 180 HOH HOH . W 8 HOH B 43 543 33 HOH HOH . W 8 HOH B 44 544 48 HOH HOH . W 8 HOH B 45 545 173 HOH HOH . W 8 HOH B 46 546 71 HOH HOH . W 8 HOH B 47 547 52 HOH HOH . W 8 HOH B 48 548 93 HOH HOH . W 8 HOH B 49 549 115 HOH HOH . W 8 HOH B 50 550 6 HOH HOH . W 8 HOH B 51 551 2 HOH HOH . W 8 HOH B 52 552 22 HOH HOH . W 8 HOH B 53 553 64 HOH HOH . W 8 HOH B 54 554 166 HOH HOH . W 8 HOH B 55 555 82 HOH HOH . W 8 HOH B 56 556 24 HOH HOH . W 8 HOH B 57 557 76 HOH HOH . W 8 HOH B 58 558 143 HOH HOH . W 8 HOH B 59 559 35 HOH HOH . W 8 HOH B 60 560 58 HOH HOH . W 8 HOH B 61 561 74 HOH HOH . W 8 HOH B 62 562 3 HOH HOH . W 8 HOH B 63 563 97 HOH HOH . W 8 HOH B 64 564 10 HOH HOH . W 8 HOH B 65 565 27 HOH HOH . W 8 HOH B 66 566 163 HOH HOH . W 8 HOH B 67 567 89 HOH HOH . W 8 HOH B 68 568 46 HOH HOH . W 8 HOH B 69 569 178 HOH HOH . W 8 HOH B 70 570 32 HOH HOH . W 8 HOH B 71 571 113 HOH HOH . W 8 HOH B 72 572 11 HOH HOH . W 8 HOH B 73 573 116 HOH HOH . W 8 HOH B 74 574 20 HOH HOH . W 8 HOH B 75 575 66 HOH HOH . W 8 HOH B 76 576 13 HOH HOH . W 8 HOH B 77 577 96 HOH HOH . W 8 HOH B 78 578 109 HOH HOH . W 8 HOH B 79 579 100 HOH HOH . W 8 HOH B 80 580 5 HOH HOH . W 8 HOH B 81 581 53 HOH HOH . W 8 HOH B 82 582 62 HOH HOH . W 8 HOH B 83 583 42 HOH HOH . W 8 HOH B 84 584 106 HOH HOH . W 8 HOH B 85 585 175 HOH HOH . W 8 HOH B 86 586 169 HOH HOH . W 8 HOH B 87 587 130 HOH HOH . W 8 HOH B 88 588 9 HOH HOH . W 8 HOH B 89 589 165 HOH HOH . W 8 HOH B 90 590 131 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . O 7 -41.961 -23.994 12.087 1 69.26 0 C1 EDO 405 B 1 HETATM 2 O O1 EDO . . . O 7 -41.005 -23.659 11.078 1 68.42 0 O1 EDO 405 B 1 HETATM 3 C C2 EDO . . . O 7 -42.266 -25.442 12.084 1 80.4 0 C2 EDO 405 B 1 HETATM 4 O O2 EDO . . . O 7 -42.636 -25.903 10.797 1 93.02 0 O2 EDO 405 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #