data_7WB9 # _model_server_result.job_id GEow1kYHsO0WWpScI-WYBQ _model_server_result.datetime_utc '2024-11-17 19:33:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wb9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 7WB9 # _exptl.entry_id 7WB9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7WB9 _cell.length_a 54.58 _cell.length_b 58.22 _cell.length_c 67.26 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WB9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 30 1_555 A SG CYS 137 A CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? disulf ? disulf2 A SG CYS 25 A CYS 48 1_555 A SG CYS 41 A CYS 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? disulf ? disulf3 A SG CYS 109 A CYS 132 1_555 A SG CYS 210 A CYS 233 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? disulf ? disulf4 A SG CYS 116 A CYS 139 1_555 A SG CYS 183 A CYS 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? disulf ? disulf5 A SG CYS 148 A CYS 171 1_555 A SG CYS 162 A CYS 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? disulf ? disulf6 A SG CYS 173 A CYS 196 1_555 A SG CYS 197 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? metalc ? metalc1 A OE1 GLU 52 A GLU 75 1_555 D CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? metalc ? metalc2 A O ASN 54 A ASN 77 1_555 D CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc3 A O VAL 57 A VAL 80 1_555 D CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc4 A OE2 GLU 62 A GLU 85 1_555 D CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc5 D CA CA . A CA 303 1_555 E O HOH . A HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? metalc ? metalc6 D CA CA . A CA 303 1_555 E O HOH . A HOH 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7WB9 _atom_sites.fract_transf_matrix[1][1] 0.018322 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017176 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014868 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 6SO A 1 301 324 6SO 6SO . C 3 DMS A 1 302 325 DMS DMS . D 4 CA A 1 303 1 CA CA . E 5 HOH A 1 401 4 HOH HOH . E 5 HOH A 2 402 42 HOH HOH . E 5 HOH A 3 403 18 HOH HOH . E 5 HOH A 4 404 55 HOH HOH . E 5 HOH A 5 405 90 HOH HOH . E 5 HOH A 6 406 92 HOH HOH . E 5 HOH A 7 407 88 HOH HOH . E 5 HOH A 8 408 116 HOH HOH . E 5 HOH A 9 409 110 HOH HOH . E 5 HOH A 10 410 80 HOH HOH . E 5 HOH A 11 411 26 HOH HOH . E 5 HOH A 12 412 30 HOH HOH . E 5 HOH A 13 413 46 HOH HOH . E 5 HOH A 14 414 24 HOH HOH . E 5 HOH A 15 415 12 HOH HOH . E 5 HOH A 16 416 73 HOH HOH . E 5 HOH A 17 417 32 HOH HOH . E 5 HOH A 18 418 89 HOH HOH . E 5 HOH A 19 419 14 HOH HOH . E 5 HOH A 20 420 48 HOH HOH . E 5 HOH A 21 421 56 HOH HOH . E 5 HOH A 22 422 33 HOH HOH . E 5 HOH A 23 423 35 HOH HOH . E 5 HOH A 24 424 41 HOH HOH . E 5 HOH A 25 425 58 HOH HOH . E 5 HOH A 26 426 112 HOH HOH . E 5 HOH A 27 427 38 HOH HOH . E 5 HOH A 28 428 68 HOH HOH . E 5 HOH A 29 429 82 HOH HOH . E 5 HOH A 30 430 72 HOH HOH . E 5 HOH A 31 431 69 HOH HOH . E 5 HOH A 32 432 103 HOH HOH . E 5 HOH A 33 433 60 HOH HOH . E 5 HOH A 34 434 20 HOH HOH . E 5 HOH A 35 435 10 HOH HOH . E 5 HOH A 36 436 17 HOH HOH . E 5 HOH A 37 437 2 HOH HOH . E 5 HOH A 38 438 1 HOH HOH . E 5 HOH A 39 439 9 HOH HOH . E 5 HOH A 40 440 13 HOH HOH . E 5 HOH A 41 441 105 HOH HOH . E 5 HOH A 42 442 57 HOH HOH . E 5 HOH A 43 443 3 HOH HOH . E 5 HOH A 44 444 6 HOH HOH . E 5 HOH A 45 445 52 HOH HOH . E 5 HOH A 46 446 75 HOH HOH . E 5 HOH A 47 447 77 HOH HOH . E 5 HOH A 48 448 5 HOH HOH . E 5 HOH A 49 449 15 HOH HOH . E 5 HOH A 50 450 53 HOH HOH . E 5 HOH A 51 451 65 HOH HOH . E 5 HOH A 52 452 22 HOH HOH . E 5 HOH A 53 453 27 HOH HOH . E 5 HOH A 54 454 8 HOH HOH . E 5 HOH A 55 455 95 HOH HOH . E 5 HOH A 56 456 98 HOH HOH . E 5 HOH A 57 457 114 HOH HOH . E 5 HOH A 58 458 100 HOH HOH . E 5 HOH A 59 459 81 HOH HOH . E 5 HOH A 60 460 31 HOH HOH . E 5 HOH A 61 461 99 HOH HOH . E 5 HOH A 62 462 34 HOH HOH . E 5 HOH A 63 463 23 HOH HOH . E 5 HOH A 64 464 49 HOH HOH . E 5 HOH A 65 465 19 HOH HOH . E 5 HOH A 66 466 86 HOH HOH . E 5 HOH A 67 467 91 HOH HOH . E 5 HOH A 68 468 54 HOH HOH . E 5 HOH A 69 469 109 HOH HOH . E 5 HOH A 70 470 36 HOH HOH . E 5 HOH A 71 471 76 HOH HOH . E 5 HOH A 72 472 102 HOH HOH . E 5 HOH A 73 473 44 HOH HOH . E 5 HOH A 74 474 97 HOH HOH . E 5 HOH A 75 475 59 HOH HOH . E 5 HOH A 76 476 113 HOH HOH . E 5 HOH A 77 477 106 HOH HOH . E 5 HOH A 78 478 70 HOH HOH . E 5 HOH A 79 479 50 HOH HOH . E 5 HOH A 80 480 25 HOH HOH . E 5 HOH A 81 481 67 HOH HOH . E 5 HOH A 82 482 16 HOH HOH . E 5 HOH A 83 483 28 HOH HOH . E 5 HOH A 84 484 21 HOH HOH . E 5 HOH A 85 485 85 HOH HOH . E 5 HOH A 86 486 104 HOH HOH . E 5 HOH A 87 487 7 HOH HOH . E 5 HOH A 88 488 111 HOH HOH . E 5 HOH A 89 489 11 HOH HOH . E 5 HOH A 90 490 96 HOH HOH . E 5 HOH A 91 491 71 HOH HOH . E 5 HOH A 92 492 39 HOH HOH . E 5 HOH A 93 493 83 HOH HOH . E 5 HOH A 94 494 47 HOH HOH . E 5 HOH A 95 495 51 HOH HOH . E 5 HOH A 96 496 62 HOH HOH . E 5 HOH A 97 497 45 HOH HOH . E 5 HOH A 98 498 40 HOH HOH . E 5 HOH A 99 499 43 HOH HOH . E 5 HOH A 100 500 61 HOH HOH . E 5 HOH A 101 501 94 HOH HOH . E 5 HOH A 102 502 79 HOH HOH . E 5 HOH A 103 503 66 HOH HOH . E 5 HOH A 104 504 84 HOH HOH . E 5 HOH A 105 505 37 HOH HOH . E 5 HOH A 106 506 87 HOH HOH . E 5 HOH A 107 507 93 HOH HOH . E 5 HOH A 108 508 64 HOH HOH . E 5 HOH A 109 509 29 HOH HOH . E 5 HOH A 110 510 108 HOH HOH . E 5 HOH A 111 511 101 HOH HOH . E 5 HOH A 112 512 74 HOH HOH . E 5 HOH A 113 513 78 HOH HOH . E 5 HOH A 114 514 107 HOH HOH . E 5 HOH A 115 515 63 HOH HOH . E 5 HOH A 116 516 115 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 17.194 _atom_site.Cartn_y 33.481 _atom_site.Cartn_z 36.677 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 11.75 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 303 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 45 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #