data_7WC4 # _model_server_result.job_id '_nqcRO1_4-LVrGfHhJO9SQ' _model_server_result.datetime_utc '2024-11-08 12:03:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wc4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":1407}' # _entry.id 7WC4 # _exptl.entry_id 7WC4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 386.654 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7WC4 _cell.length_a 49.9 _cell.length_b 54.73 _cell.length_c 178.02 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WC4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 82 A CYS 148 1_555 A SG CYS 161 A CYS 227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? disulf ? disulf2 A SG CYS 322 A CYS 349 1_555 A SG CYS 326 A CYS 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? metalc ? metalc1 A OE1 GLU 207 A GLU 1008 1_555 I MG MG . A MG 1408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc2 A OE2 GLU 207 A GLU 1008 1_555 I MG MG . A MG 1408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? metalc ? metalc3 A OE1 GLU 207 A GLU 1008 1_555 I MG MG . A MG 1408 2_356 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc4 A OE2 GLU 207 A GLU 1008 1_555 I MG MG . A MG 1408 2_356 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? metalc ? metalc5 A OD1 ASP 211 A ASP 1012 1_555 I MG MG . A MG 1408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.792 ? metalc ? metalc6 A OD2 ASP 211 A ASP 1012 1_555 I MG MG . A MG 1408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc7 A OD1 ASP 211 A ASP 1012 1_555 I MG MG . A MG 1408 2_356 ? ? ? ? ? ? ? ? ? ? ? ? 2.79 ? metalc ? metalc8 A OD2 ASP 211 A ASP 1012 1_555 I MG MG . A MG 1408 2_356 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 107 n n C1 C10 CLR sing 108 n n C1 H11 CLR sing 109 n n C1 H12 CLR sing 110 n n C2 C3 CLR sing 111 n n C2 H21 CLR sing 112 n n C2 H22 CLR sing 113 n n C3 C4 CLR sing 114 n n C3 O1 CLR sing 115 n n C3 H3 CLR sing 116 n n C4 C5 CLR sing 117 n n C4 H41 CLR sing 118 n n C4 H42 CLR sing 119 n n C5 C6 CLR doub 120 n n C5 C10 CLR sing 121 n n C6 C7 CLR sing 122 n n C6 H6 CLR sing 123 n n C7 C8 CLR sing 124 n n C7 H71 CLR sing 125 n n C7 H72 CLR sing 126 n n C8 C9 CLR sing 127 n n C8 C14 CLR sing 128 n n C8 H8 CLR sing 129 n n C9 C10 CLR sing 130 n n C9 C11 CLR sing 131 n n C9 H9 CLR sing 132 n n C10 C19 CLR sing 133 n n C11 C12 CLR sing 134 n n C11 H111 CLR sing 135 n n C11 H112 CLR sing 136 n n C12 C13 CLR sing 137 n n C12 H121 CLR sing 138 n n C12 H122 CLR sing 139 n n C13 C14 CLR sing 140 n n C13 C17 CLR sing 141 n n C13 C18 CLR sing 142 n n C14 C15 CLR sing 143 n n C14 H14 CLR sing 144 n n C15 C16 CLR sing 145 n n C15 H151 CLR sing 146 n n C15 H152 CLR sing 147 n n C16 C17 CLR sing 148 n n C16 H161 CLR sing 149 n n C16 H162 CLR sing 150 n n C17 C20 CLR sing 151 n n C17 H17 CLR sing 152 n n C18 H181 CLR sing 153 n n C18 H182 CLR sing 154 n n C18 H183 CLR sing 155 n n C19 H191 CLR sing 156 n n C19 H192 CLR sing 157 n n C19 H193 CLR sing 158 n n C20 C21 CLR sing 159 n n C20 C22 CLR sing 160 n n C20 H20 CLR sing 161 n n C21 H211 CLR sing 162 n n C21 H212 CLR sing 163 n n C21 H213 CLR sing 164 n n C22 C23 CLR sing 165 n n C22 H221 CLR sing 166 n n C22 H222 CLR sing 167 n n C23 C24 CLR sing 168 n n C23 H231 CLR sing 169 n n C23 H232 CLR sing 170 n n C24 C25 CLR sing 171 n n C24 H241 CLR sing 172 n n C24 H242 CLR sing 173 n n C25 C26 CLR sing 174 n n C25 C27 CLR sing 175 n n C25 H25 CLR sing 176 n n C26 H261 CLR sing 177 n n C26 H262 CLR sing 178 n n C26 H263 CLR sing 179 n n C27 H271 CLR sing 180 n n C27 H272 CLR sing 181 n n C27 H273 CLR sing 182 n n O1 H1 CLR sing 183 n n # _atom_sites.entry_id 7WC4 _atom_sites.fract_transf_matrix[1][1] 0.02004 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018272 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005617 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CLR A 1 1401 1401 CLR CLR . C 2 CLR A 1 1402 1701 CLR CLR . D 3 1PE A 1 1403 1801 1PE 1PE . E 4 OLC A 1 1404 2001 OLC OLC . F 4 OLC A 1 1405 2101 OLC OLC . G 4 OLC A 1 1406 2201 OLC OLC . H 2 CLR A 1 1407 2301 CLR CLR . I 5 MG A 1 1408 901 MG MG . J 6 SRO A 1 1409 2302 SRO SRO . K 7 HOH A 1 1501 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . H 2 -10.395 -7.186 123.426 1 120.03 ? C1 CLR 1407 A 1 HETATM 2 C C2 CLR . . . H 2 -10.103 -6.882 121.948 1 120.74 ? C2 CLR 1407 A 1 HETATM 3 C C3 CLR . . . H 2 -10.314 -5.425 121.604 1 111.35 ? C3 CLR 1407 A 1 HETATM 4 C C4 CLR . . . H 2 -9.466 -4.571 122.529 1 106.73 ? C4 CLR 1407 A 1 HETATM 5 C C5 CLR . . . H 2 -9.698 -4.878 123.999 1 111.66 ? C5 CLR 1407 A 1 HETATM 6 C C6 CLR . . . H 2 -9.96 -3.891 124.843 1 124.74 ? C6 CLR 1407 A 1 HETATM 7 C C7 CLR . . . H 2 -10.316 -4.061 126.283 1 118.84 ? C7 CLR 1407 A 1 HETATM 8 C C8 CLR . . . H 2 -9.804 -5.383 126.843 1 115.1 ? C8 CLR 1407 A 1 HETATM 9 C C9 CLR . . . H 2 -10.171 -6.537 125.886 1 112.63 ? C9 CLR 1407 A 1 HETATM 10 C C10 CLR . . . H 2 -9.584 -6.342 124.443 1 112.09 ? C10 CLR 1407 A 1 HETATM 11 C C11 CLR . . . H 2 -9.885 -7.921 126.517 1 103.91 ? C11 CLR 1407 A 1 HETATM 12 C C12 CLR . . . H 2 -10.348 -8.087 127.979 1 101.6 ? C12 CLR 1407 A 1 HETATM 13 C C13 CLR . . . H 2 -9.881 -6.941 128.892 1 105.35 ? C13 CLR 1407 A 1 HETATM 14 C C14 CLR . . . H 2 -10.401 -5.653 128.22 1 113.59 ? C14 CLR 1407 A 1 HETATM 15 C C15 CLR . . . H 2 -10.306 -4.582 129.304 1 120.87 ? C15 CLR 1407 A 1 HETATM 16 C C16 CLR . . . H 2 -10.708 -5.328 130.593 1 108.14 ? C16 CLR 1407 A 1 HETATM 17 C C17 CLR . . . H 2 -10.506 -6.846 130.326 1 103.51 ? C17 CLR 1407 A 1 HETATM 18 C C18 CLR . . . H 2 -8.349 -6.951 129.016 1 118.54 ? C18 CLR 1407 A 1 HETATM 19 C C19 CLR . . . H 2 -8.098 -6.75 124.382 1 113.63 ? C19 CLR 1407 A 1 HETATM 20 C C20 CLR . . . H 2 -9.79 -7.501 131.522 1 83.06 ? C20 CLR 1407 A 1 HETATM 21 O O1 CLR . . . H 2 -10.013 -5.185 120.219 1 101.49 ? O1 CLR 1407 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 21 #