data_7WC6 # _model_server_result.job_id wY37WXudrjD9eiCWtMx_3w _model_server_result.datetime_utc '2024-11-24 03:49:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wc6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1205}' # _entry.id 7WC6 # _exptl.entry_id 7WC6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 323.432 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (8alpha)-N,N-diethyl-6-methyl-9,10-didehydroergoline-8-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7WC6 _cell.length_a 49.58 _cell.length_b 54.45 _cell.length_c 178.94 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WC6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 82 A CYS 148 1_555 A SG CYS 161 A CYS 227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 A SG CYS 322 A CYS 349 1_555 A SG CYS 326 A CYS 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc1 A OE1 GLU 207 A GLU 1008 1_555 B MG MG . A MG 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? metalc ? metalc2 A OE1 GLU 207 A GLU 1008 1_555 B MG MG . A MG 1201 2_356 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? metalc ? metalc3 A OD2 ASP 211 A ASP 1012 1_555 B MG MG . A MG 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? metalc ? metalc4 A OD1 ASP 211 A ASP 1012 1_555 B MG MG . A MG 1201 2_356 ? ? ? ? ? ? ? ? ? ? ? ? 2.98 ? metalc ? metalc5 A OD2 ASP 211 A ASP 1012 1_555 B MG MG . A MG 1201 2_356 ? ? ? ? ? ? ? ? ? ? ? ? 1.977 ? # _chem_comp.formula 'C20 H25 N3 O' _chem_comp.formula_weight 323.432 _chem_comp.id 7LD _chem_comp.mon_nstd_flag . _chem_comp.name (8alpha)-N,N-diethyl-6-methyl-9,10-didehydroergoline-8-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'Lysergic acid diethylamide' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C12 N2 7LD sing 38 n n C8 C7 7LD doub 39 n y C8 N1 7LD sing 40 n y C15 C7 7LD sing 41 n n C15 C11 7LD sing 42 n n C7 C3 7LD sing 43 n y N1 C1 7LD sing 44 n y N2 C11 7LD sing 45 n n N2 C13 7LD sing 46 n n C11 C9 7LD sing 47 n n C3 C1 7LD doub 48 n y C3 C6 7LD sing 49 n y C13 C14 7LD sing 50 n n C1 C4 7LD sing 51 n y C9 C6 7LD sing 52 n n C9 C10 7LD doub 53 n n C6 C2 7LD doub 54 n y C4 C5 7LD doub 55 n y C14 C10 7LD sing 56 n n C14 C16 7LD sing 57 n n C17 N3 7LD sing 58 n n C17 C18 7LD sing 59 n n C2 C5 7LD sing 60 n y C16 N3 7LD sing 61 n n C16 O1 7LD doub 62 n n N3 C19 7LD sing 63 n n C20 C19 7LD sing 64 n n N1 H1 7LD sing 65 n n C4 H2 7LD sing 66 n n C5 H3 7LD sing 67 n n C8 H4 7LD sing 68 n n C10 H5 7LD sing 69 n n C13 H6 7LD sing 70 n n C13 H7 7LD sing 71 n n C15 H8 7LD sing 72 n n C15 H9 7LD sing 73 n n C17 H10 7LD sing 74 n n C17 H11 7LD sing 75 n n C20 H12 7LD sing 76 n n C20 H13 7LD sing 77 n n C20 H14 7LD sing 78 n n C12 H16 7LD sing 79 n n C12 H17 7LD sing 80 n n C12 H18 7LD sing 81 n n C11 H19 7LD sing 82 n n C2 H20 7LD sing 83 n n C14 H21 7LD sing 84 n n C19 H22 7LD sing 85 n n C19 H23 7LD sing 86 n n C18 H24 7LD sing 87 n n C18 H25 7LD sing 88 n n C18 H26 7LD sing 89 n n # _atom_sites.entry_id 7WC6 _atom_sites.fract_transf_matrix[1][1] 0.020169 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018365 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005588 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 1201 901 MG MG . C 3 CLR A 1 1202 1401 CLR CLR . D 4 OLC A 1 1203 2101 OLC OLC . E 4 OLC A 1 1204 2201 OLC OLC . F 5 7LD A 1 1205 2302 7LD 7LD . G 6 1PE A 1 1206 2303 1PE 1PE . H 4 OLC A 1 1207 2305 OLC OLC . I 4 OLC A 1 1208 2306 OLC OLC . J 7 PEG A 1 1209 2308 PEG PEG . K 7 PEG A 1 1210 2309 PEG PEG . L 7 PEG A 1 1211 2310 PEG PEG . M 8 HOH A 1 1301 1 HOH HOH . M 8 HOH A 2 1302 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 7LD . . . F 5 -30.064 -7.583 140.193 1 76.9 ? N1 7LD 1205 A 1 HETATM 2 N N3 7LD . . . F 5 -24.729 -14.004 144.853 1 88.91 ? N3 7LD 1205 A 1 HETATM 3 C C4 7LD . . . F 5 -30.859 -7.828 142.583 1 72.8 ? C4 7LD 1205 A 1 HETATM 4 C C5 7LD . . . F 5 -30.631 -8.618 143.701 1 78.29 ? C5 7LD 1205 A 1 HETATM 5 C C6 7LD . . . F 5 -28.917 -9.934 142.622 1 88.4 ? C6 7LD 1205 A 1 HETATM 6 C C7 7LD . . . F 5 -28.54 -9.244 140.215 1 78.33 ? C7 7LD 1205 A 1 HETATM 7 C C8 7LD . . . F 5 -29.107 -8.27 139.441 1 86.71 ? C8 7LD 1205 A 1 HETATM 8 C C10 7LD . . . F 5 -27.263 -11.539 143.543 1 81.71 ? C10 7LD 1205 A 1 HETATM 9 C C13 7LD . . . F 5 -26.355 -13.359 142.059 1 75.77 ? C13 7LD 1205 A 1 HETATM 10 C C15 7LD . . . F 5 -27.473 -10.29 140.033 1 78.86 ? C15 7LD 1205 A 1 HETATM 11 C C17 7LD . . . F 5 -23.48 -13.474 144.253 1 92.13 ? C17 7LD 1205 A 1 HETATM 12 C C20 7LD . . . F 5 -23.961 -16.381 144.929 1 81.2 ? C20 7LD 1205 A 1 HETATM 13 N N2 7LD . . . F 5 -26.484 -12.41 140.937 1 72.19 ? N2 7LD 1205 A 1 HETATM 14 C C12 7LD . . . F 5 -26.485 -13.139 139.651 1 68.57 ? C12 7LD 1205 A 1 HETATM 15 C C11 7LD . . . F 5 -27.634 -11.476 141.043 1 81 ? C11 7LD 1205 A 1 HETATM 16 C C3 7LD . . . F 5 -29.168 -9.148 141.475 1 92.17 ? C3 7LD 1205 A 1 HETATM 17 C C1 7LD . . . F 5 -30.106 -8.113 141.451 1 77.4 ? C1 7LD 1205 A 1 HETATM 18 C C2 7LD . . . F 5 -29.668 -9.649 143.755 1 75.07 ? C2 7LD 1205 A 1 HETATM 19 C C9 7LD . . . F 5 -27.89 -11.001 142.491 1 82.02 ? C9 7LD 1205 A 1 HETATM 20 C C14 7LD . . . F 5 -26.145 -12.573 143.38 1 84.52 ? C14 7LD 1205 A 1 HETATM 21 C C16 7LD . . . F 5 -25.939 -13.44 144.633 1 85.26 ? C16 7LD 1205 A 1 HETATM 22 O O1 7LD . . . F 5 -26.848 -13.567 145.455 1 97.51 ? O1 7LD 1205 A 1 HETATM 23 C C19 7LD . . . F 5 -24.595 -15.21 145.692 1 79.02 ? C19 7LD 1205 A 1 HETATM 24 C C18 7LD . . . F 5 -23.009 -12.173 144.877 1 90.98 ? C18 7LD 1205 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 46 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 366 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 24 #