data_7WC8 # _model_server_result.job_id RFnKMk4F0Fp1GbZ-OmeVjQ _model_server_result.datetime_utc '2024-11-08 13:55:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wc8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":1207}' # _entry.id 7WC8 # _exptl.entry_id 7WC8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 393.497 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-(4-fluorophenyl)-4-[(10~{R},15~{S})-4-methyl-1,4,12-triazatetracyclo[7.6.1.0^{5,16}.0^{10,15}]hexadeca-5,7,9(16)-trien-12-yl]butan-1-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7WC8 _cell.length_a 49.47 _cell.length_b 55.33 _cell.length_c 179.97 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WC8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 82 A CYS 148 1_555 A SG CYS 161 A CYS 227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? disulf ? disulf2 A SG CYS 322 A CYS 349 1_555 A SG CYS 326 A CYS 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc1 A OE2 GLU 207 A GLU 1008 1_555 B MG MG . A MG 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.873 ? metalc ? metalc2 A OE2 GLU 207 A GLU 1008 1_555 B MG MG . A MG 1201 2_356 ? ? ? ? ? ? ? ? ? ? ? ? 1.862 ? metalc ? metalc3 A OD2 ASP 211 A ASP 1012 1_555 B MG MG . A MG 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.849 ? metalc ? metalc4 A OD2 ASP 211 A ASP 1012 1_555 B MG MG . A MG 1201 2_356 ? ? ? ? ? ? ? ? ? ? ? ? 1.844 ? # _chem_comp.formula 'C24 H28 F N3 O' _chem_comp.formula_weight 393.497 _chem_comp.id 92S _chem_comp.mon_nstd_flag . _chem_comp.name 1-(4-fluorophenyl)-4-[(10~{R},15~{S})-4-methyl-1,4,12-triazatetracyclo[7.6.1.0^{5,16}.0^{10,15}]hexadeca-5,7,9(16)-trien-12-yl]butan-1-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms lumateperone # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F1 C11 92S sing 38 n n C11 C10 92S doub 39 n y C11 C12 92S sing 40 n y C10 C9 92S sing 41 n y C12 C13 92S doub 42 n y C9 C8 92S doub 43 n y C13 C8 92S sing 44 n y C8 C7 92S sing 45 n n C7 C6 92S sing 46 n n C7 O1 92S doub 47 n n C6 C5 92S sing 48 n n C5 C4 92S sing 49 n n C4 N1 92S sing 50 n n N1 C3 92S sing 51 n n N1 C14 92S sing 52 n n C3 C2 92S sing 53 n n C14 C15 92S sing 54 n n C2 C1 92S sing 55 n n C15 C1 92S sing 56 n n C15 C16 92S sing 57 n n C1 N2 92S sing 58 n n N2 C21 92S sing 59 n n N2 C22 92S sing 60 n n C16 C17 92S sing 61 n y C16 C21 92S doub 62 n y C17 C18 92S doub 63 n y C21 C20 92S sing 64 n y C22 C23 92S sing 65 n n C18 C19 92S sing 66 n y C23 N3 92S sing 67 n n C20 C19 92S doub 68 n y C20 N3 92S sing 69 n n N3 C24 92S sing 70 n n C4 H2 92S sing 71 n n C4 H3 92S sing 72 n n C5 H4 92S sing 73 n n C5 H5 92S sing 74 n n C6 H6 92S sing 75 n n C6 H7 92S sing 76 n n C10 H8 92S sing 77 n n C13 H9 92S sing 78 n n C15 H10 92S sing 79 n n C17 H11 92S sing 80 n n C22 H12 92S sing 81 n n C22 H13 92S sing 82 n n C24 H14 92S sing 83 n n C24 H15 92S sing 84 n n C24 H16 92S sing 85 n n C1 H17 92S sing 86 n n C2 H18 92S sing 87 n n C2 H19 92S sing 88 n n C3 H20 92S sing 89 n n C3 H21 92S sing 90 n n C9 H22 92S sing 91 n n C12 H23 92S sing 92 n n C14 H24 92S sing 93 n n C14 H25 92S sing 94 n n C18 H26 92S sing 95 n n C19 H27 92S sing 96 n n C23 H28 92S sing 97 n n C23 H29 92S sing 98 n n # _atom_sites.entry_id 7WC8 _atom_sites.fract_transf_matrix[1][1] 0.020214 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018073 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005556 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 1201 901 MG MG . C 3 CLR A 1 1202 1401 CLR CLR . D 4 1PE A 1 1203 1801 1PE 1PE . E 5 OLC A 1 1204 2001 OLC OLC . F 5 OLC A 1 1205 2101 OLC OLC . G 5 OLC A 1 1206 2401 OLC OLC . H 6 92S A 1 1207 2501 92S LIG . I 5 OLC A 1 1208 2502 OLC OLC . J 5 OLC A 1 1209 2503 OLC OLC . K 5 OLC A 1 1210 2504 OLC OLC . L 3 CLR A 1 1211 2506 CLR CLR . M 5 OLC A 1 1212 2507 OLC OLC . N 3 CLR A 1 1213 2509 CLR CLR . O 5 OLC A 1 1214 2511 OLC OLC . P 5 OLC A 1 1215 2512 OLC OLC . Q 5 OLC A 1 1216 2513 OLC OLC . R 3 CLR A 1 1217 2514 CLR CLR . S 5 OLC A 1 1218 2515 OLC OLC . T 7 PEG A 1 1219 2516 PEG PEG . U 8 HOH A 1 1301 2 HOH HOH . U 8 HOH A 2 1302 1 HOH HOH . U 8 HOH A 3 1303 9 HOH HOH . U 8 HOH A 4 1304 6 HOH HOH . U 8 HOH A 5 1305 4 HOH HOH . U 8 HOH A 6 1306 5 HOH HOH . U 8 HOH A 7 1307 10 HOH HOH . U 8 HOH A 8 1308 3 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 92S . . . H 6 -26.404 -13.423 143.244 1 67.17 ? N1 92S 1207 A 1 HETATM 2 N N3 92S . . . H 6 -28.862 -16.062 148.325 1 68.37 ? N3 92S 1207 A 1 HETATM 3 C C4 92S . . . H 6 -26.978 -13.517 141.891 1 65.12 ? C4 92S 1207 A 1 HETATM 4 C C5 92S . . . H 6 -27.349 -12.158 141.372 1 71.43 ? C5 92S 1207 A 1 HETATM 5 C C6 92S . . . H 6 -28.05 -12.146 140.013 1 66.37 ? C6 92S 1207 A 1 HETATM 6 C C7 92S . . . H 6 -28.237 -10.716 139.549 1 62.96 ? C7 92S 1207 A 1 HETATM 7 C C8 92S . . . H 6 -28.914 -10.441 138.25 1 54.21 ? C8 92S 1207 A 1 HETATM 8 C C10 92S . . . H 6 -30.009 -11.273 136.275 1 60.92 ? C10 92S 1207 A 1 HETATM 9 C C13 92S . . . H 6 -29.095 -9.15 137.768 1 60.35 ? C13 92S 1207 A 1 HETATM 10 C C15 92S . . . H 6 -26.808 -12.811 145.652 1 64.15 ? C15 92S 1207 A 1 HETATM 11 C C17 92S . . . H 6 -29.017 -12.085 146.946 1 79.96 ? C17 92S 1207 A 1 HETATM 12 C C20 92S . . . H 6 -28.987 -14.736 147.926 1 67.05 ? C20 92S 1207 A 1 HETATM 13 C C21 92S . . . H 6 -27.97 -14.238 147.102 1 60.44 ? C21 92S 1207 A 1 HETATM 14 C C22 92S . . . H 6 -26.547 -16.089 147.508 1 61.51 ? C22 92S 1207 A 1 HETATM 15 C C24 92S . . . H 6 -29.783 -16.678 149.27 1 77.53 ? C24 92S 1207 A 1 HETATM 16 C C1 92S . . . H 6 -25.919 -14.043 146.069 1 64.84 ? C1 92S 1207 A 1 HETATM 17 C C2 92S . . . H 6 -25.081 -14.6 144.952 1 62.91 ? C2 92S 1207 A 1 HETATM 18 C C3 92S . . . H 6 -25.867 -14.722 143.66 1 66.29 ? C3 92S 1207 A 1 HETATM 19 O O1 92S . . . H 6 -27.815 -9.779 140.225 1 57.12 ? O1 92S 1207 A 1 HETATM 20 C C9 92S . . . H 6 -29.357 -11.497 137.471 1 66.95 ? C9 92S 1207 A 1 HETATM 21 C C11 92S . . . H 6 -30.161 -9.985 135.845 1 55.24 ? C11 92S 1207 A 1 HETATM 22 F F1 92S . . . H 6 -30.797 -9.758 134.662 1 57.97 ? F1 92S 1207 A 1 HETATM 23 C C12 92S . . . H 6 -29.715 -8.914 136.548 1 56.49 ? C12 92S 1207 A 1 HETATM 24 C C14 92S . . . H 6 -27.351 -12.881 144.224 1 64.43 ? C14 92S 1207 A 1 HETATM 25 C C16 92S . . . H 6 -27.975 -12.937 146.608 1 68.49 ? C16 92S 1207 A 1 HETATM 26 C C18 92S . . . H 6 -30.054 -12.572 147.782 1 64.6 ? C18 92S 1207 A 1 HETATM 27 C C19 92S . . . H 6 -30.043 -13.875 148.269 1 57.87 ? C19 92S 1207 A 1 HETATM 28 N N2 92S . . . H 6 -26.907 -15.013 146.577 1 67.1 ? N2 92S 1207 A 1 HETATM 29 C C23 92S . . . H 6 -27.787 -16.918 147.792 1 58.55 ? C23 92S 1207 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 37 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 345 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 29 #