data_7WC8 # _model_server_result.job_id 3wma10ojoeRjKC_RnBiW3Q _model_server_result.datetime_utc '2024-11-08 13:32:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wc8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"R","auth_seq_id":1217}' # _entry.id 7WC8 # _exptl.entry_id 7WC8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 386.654 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7WC8 _cell.length_a 49.47 _cell.length_b 55.33 _cell.length_c 179.97 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WC8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 L N N ? 3 N N N ? 3 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 82 A CYS 148 1_555 A SG CYS 161 A CYS 227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? disulf ? disulf2 A SG CYS 322 A CYS 349 1_555 A SG CYS 326 A CYS 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc1 A OE2 GLU 207 A GLU 1008 1_555 B MG MG . A MG 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.873 ? metalc ? metalc2 A OE2 GLU 207 A GLU 1008 1_555 B MG MG . A MG 1201 2_356 ? ? ? ? ? ? ? ? ? ? ? ? 1.862 ? metalc ? metalc3 A OD2 ASP 211 A ASP 1012 1_555 B MG MG . A MG 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.849 ? metalc ? metalc4 A OD2 ASP 211 A ASP 1012 1_555 B MG MG . A MG 1201 2_356 ? ? ? ? ? ? ? ? ? ? ? ? 1.844 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 168 n n C1 C10 CLR sing 169 n n C1 H11 CLR sing 170 n n C1 H12 CLR sing 171 n n C2 C3 CLR sing 172 n n C2 H21 CLR sing 173 n n C2 H22 CLR sing 174 n n C3 C4 CLR sing 175 n n C3 O1 CLR sing 176 n n C3 H3 CLR sing 177 n n C4 C5 CLR sing 178 n n C4 H41 CLR sing 179 n n C4 H42 CLR sing 180 n n C5 C6 CLR doub 181 n n C5 C10 CLR sing 182 n n C6 C7 CLR sing 183 n n C6 H6 CLR sing 184 n n C7 C8 CLR sing 185 n n C7 H71 CLR sing 186 n n C7 H72 CLR sing 187 n n C8 C9 CLR sing 188 n n C8 C14 CLR sing 189 n n C8 H8 CLR sing 190 n n C9 C10 CLR sing 191 n n C9 C11 CLR sing 192 n n C9 H9 CLR sing 193 n n C10 C19 CLR sing 194 n n C11 C12 CLR sing 195 n n C11 H111 CLR sing 196 n n C11 H112 CLR sing 197 n n C12 C13 CLR sing 198 n n C12 H121 CLR sing 199 n n C12 H122 CLR sing 200 n n C13 C14 CLR sing 201 n n C13 C17 CLR sing 202 n n C13 C18 CLR sing 203 n n C14 C15 CLR sing 204 n n C14 H14 CLR sing 205 n n C15 C16 CLR sing 206 n n C15 H151 CLR sing 207 n n C15 H152 CLR sing 208 n n C16 C17 CLR sing 209 n n C16 H161 CLR sing 210 n n C16 H162 CLR sing 211 n n C17 C20 CLR sing 212 n n C17 H17 CLR sing 213 n n C18 H181 CLR sing 214 n n C18 H182 CLR sing 215 n n C18 H183 CLR sing 216 n n C19 H191 CLR sing 217 n n C19 H192 CLR sing 218 n n C19 H193 CLR sing 219 n n C20 C21 CLR sing 220 n n C20 C22 CLR sing 221 n n C20 H20 CLR sing 222 n n C21 H211 CLR sing 223 n n C21 H212 CLR sing 224 n n C21 H213 CLR sing 225 n n C22 C23 CLR sing 226 n n C22 H221 CLR sing 227 n n C22 H222 CLR sing 228 n n C23 C24 CLR sing 229 n n C23 H231 CLR sing 230 n n C23 H232 CLR sing 231 n n C24 C25 CLR sing 232 n n C24 H241 CLR sing 233 n n C24 H242 CLR sing 234 n n C25 C26 CLR sing 235 n n C25 C27 CLR sing 236 n n C25 H25 CLR sing 237 n n C26 H261 CLR sing 238 n n C26 H262 CLR sing 239 n n C26 H263 CLR sing 240 n n C27 H271 CLR sing 241 n n C27 H272 CLR sing 242 n n C27 H273 CLR sing 243 n n O1 H1 CLR sing 244 n n # _atom_sites.entry_id 7WC8 _atom_sites.fract_transf_matrix[1][1] 0.020214 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018073 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005556 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 1201 901 MG MG . C 3 CLR A 1 1202 1401 CLR CLR . D 4 1PE A 1 1203 1801 1PE 1PE . E 5 OLC A 1 1204 2001 OLC OLC . F 5 OLC A 1 1205 2101 OLC OLC . G 5 OLC A 1 1206 2401 OLC OLC . H 6 92S A 1 1207 2501 92S LIG . I 5 OLC A 1 1208 2502 OLC OLC . J 5 OLC A 1 1209 2503 OLC OLC . K 5 OLC A 1 1210 2504 OLC OLC . L 3 CLR A 1 1211 2506 CLR CLR . M 5 OLC A 1 1212 2507 OLC OLC . N 3 CLR A 1 1213 2509 CLR CLR . O 5 OLC A 1 1214 2511 OLC OLC . P 5 OLC A 1 1215 2512 OLC OLC . Q 5 OLC A 1 1216 2513 OLC OLC . R 3 CLR A 1 1217 2514 CLR CLR . S 5 OLC A 1 1218 2515 OLC OLC . T 7 PEG A 1 1219 2516 PEG PEG . U 8 HOH A 1 1301 2 HOH HOH . U 8 HOH A 2 1302 1 HOH HOH . U 8 HOH A 3 1303 9 HOH HOH . U 8 HOH A 4 1304 6 HOH HOH . U 8 HOH A 5 1305 4 HOH HOH . U 8 HOH A 6 1306 5 HOH HOH . U 8 HOH A 7 1307 10 HOH HOH . U 8 HOH A 8 1308 3 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . R 3 -11.543 -6.343 120.597 1 162.72 ? C1 CLR 1217 A 1 HETATM 2 C C2 CLR . . . R 3 -11.202 -6.677 119.134 1 156.56 ? C2 CLR 1217 A 1 HETATM 3 C C3 CLR . . . R 3 -12.437 -6.974 118.305 1 144.72 ? C3 CLR 1217 A 1 HETATM 4 C C4 CLR . . . R 3 -13.421 -5.826 118.417 1 129.81 ? C4 CLR 1217 A 1 HETATM 5 C C5 CLR . . . R 3 -13.773 -5.554 119.868 1 142.3 ? C5 CLR 1217 A 1 HETATM 6 C C6 CLR . . . R 3 -15.029 -5.674 120.292 1 145.5 ? C6 CLR 1217 A 1 HETATM 7 C C7 CLR . . . R 3 -15.47 -5.593 121.72 1 136.45 ? C7 CLR 1217 A 1 HETATM 8 C C8 CLR . . . R 3 -14.51 -4.751 122.553 1 133.98 ? C8 CLR 1217 A 1 HETATM 9 C C9 CLR . . . R 3 -13.033 -5.136 122.292 1 146.04 ? C9 CLR 1217 A 1 HETATM 10 C C10 CLR . . . R 3 -12.593 -5.213 120.785 1 149.59 ? C10 CLR 1217 A 1 HETATM 11 C C11 CLR . . . R 3 -12.121 -4.254 123.167 1 138.97 ? C11 CLR 1217 A 1 HETATM 12 C C12 CLR . . . R 3 -12.515 -4.165 124.655 1 135.87 ? C12 CLR 1217 A 1 HETATM 13 C C13 CLR . . . R 3 -14.012 -3.911 124.931 1 123.74 ? C13 CLR 1217 A 1 HETATM 14 C C14 CLR . . . R 3 -14.791 -4.903 124.045 1 121.01 ? C14 CLR 1217 A 1 HETATM 15 C C15 CLR . . . R 3 -16.218 -4.833 124.574 1 127.74 ? C15 CLR 1217 A 1 HETATM 16 C C16 CLR . . . R 3 -16.033 -4.611 126.091 1 120.78 ? C16 CLR 1217 A 1 HETATM 17 C C17 CLR . . . R 3 -14.534 -4.327 126.345 1 110.46 ? C17 CLR 1217 A 1 HETATM 18 C C18 CLR . . . R 3 -14.4 -2.449 124.635 1 125.78 ? C18 CLR 1217 A 1 HETATM 19 C C19 CLR . . . R 3 -11.963 -3.89 120.294 1 161.7 ? C19 CLR 1217 A 1 HETATM 20 C C20 CLR . . . R 3 -14.295 -3.434 127.583 1 112.44 ? C20 CLR 1217 A 1 HETATM 21 C C21 CLR . . . R 3 -12.971 -3.746 128.278 1 127.71 ? C21 CLR 1217 A 1 HETATM 22 C C22 CLR . . . R 3 -15.438 -3.563 128.601 1 98.88 ? C22 CLR 1217 A 1 HETATM 23 C C23 CLR . . . R 3 -15.108 -3.163 130.026 1 98.44 ? C23 CLR 1217 A 1 HETATM 24 C C24 CLR . . . R 3 -15.378 -4.25 131.059 1 87.66 ? C24 CLR 1217 A 1 HETATM 25 C C25 CLR . . . R 3 -14.702 -4.046 132.436 1 97.01 ? C25 CLR 1217 A 1 HETATM 26 C C26 CLR . . . R 3 -15.37 -4.851 133.531 1 113.24 ? C26 CLR 1217 A 1 HETATM 27 C C27 CLR . . . R 3 -14.702 -2.599 132.863 1 109.39 ? C27 CLR 1217 A 1 HETATM 28 O O1 CLR . . . R 3 -12.13 -7.219 116.927 1 142.76 ? O1 CLR 1217 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 40 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #