data_7WC9 # _model_server_result.job_id SGFF7lhx-aCvDx-zV3RdSA _model_server_result.datetime_utc '2024-11-08 12:37:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wc9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1206}' # _entry.id 7WC9 # _exptl.entry_id 7WC9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 377.522 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (10~{R},15~{S})-12-[3-(2-methoxyphenyl)propyl]-4-methyl-1,4,12-triazatetracyclo[7.6.1.0^{5,16}.0^{10,15}]hexadeca-5(16),6,8-triene _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7WC9 _cell.length_a 49.53 _cell.length_b 54.95 _cell.length_c 179.88 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WC9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 82 A CYS 148 1_555 A SG CYS 161 A CYS 227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? disulf ? disulf2 A SG CYS 322 A CYS 349 1_555 A SG CYS 326 A CYS 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? metalc ? metalc1 A OE2 GLU 207 A GLU 1008 1_555 B MG MG . A MG 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.947 ? metalc ? metalc2 A OE2 GLU 207 A GLU 1008 1_555 B MG MG . A MG 1201 2_356 ? ? ? ? ? ? ? ? ? ? ? ? 1.944 ? metalc ? metalc3 A OD1 ASP 211 A ASP 1012 1_555 B MG MG . A MG 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.888 ? metalc ? metalc4 A OD2 ASP 211 A ASP 1012 1_555 B MG MG . A MG 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc5 A OD1 ASP 211 A ASP 1012 1_555 B MG MG . A MG 1201 2_356 ? ? ? ? ? ? ? ? ? ? ? ? 2.887 ? metalc ? metalc6 A OD2 ASP 211 A ASP 1012 1_555 B MG MG . A MG 1201 2_356 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? # _chem_comp.formula 'C24 H31 N3 O' _chem_comp.formula_weight 377.522 _chem_comp.id 93F _chem_comp.mon_nstd_flag . _chem_comp.name (10~{R},15~{S})-12-[3-(2-methoxyphenyl)propyl]-4-methyl-1,4,12-triazatetracyclo[7.6.1.0^{5,16}.0^{10,15}]hexadeca-5(16),6,8-triene _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C24 O1 93F sing 38 n n O1 C23 93F sing 39 n n C23 C22 93F doub 40 n y C23 C18 93F sing 41 n y C22 C21 93F sing 42 n y C17 C18 93F sing 43 n n C17 C5 93F sing 44 n n C18 C19 93F doub 45 n y C21 C20 93F doub 46 n y C5 C4 93F sing 47 n n C19 C20 93F sing 48 n y C4 N1 93F sing 49 n n N1 C3 93F sing 50 n n N1 C6 93F sing 51 n n C3 C2 93F sing 52 n n C6 C7 93F sing 53 n n C2 C1 93F sing 54 n n C7 C1 93F sing 55 n n C7 C8 93F sing 56 n n C1 N2 93F sing 57 n n N2 C13 93F sing 58 n n N2 C14 93F sing 59 n n C8 C9 93F doub 60 n y C8 C13 93F sing 61 n y C9 C10 93F sing 62 n y C13 C12 93F doub 63 n y C14 C15 93F sing 64 n n C15 N3 93F sing 65 n n C10 C11 93F doub 66 n y C12 C11 93F sing 67 n y C12 N3 93F sing 68 n n N3 C16 93F sing 69 n n C4 H2 93F sing 70 n n C4 H3 93F sing 71 n n C5 H4 93F sing 72 n n C5 H5 93F sing 73 n n C6 H6 93F sing 74 n n C6 H7 93F sing 75 n n C7 H8 93F sing 76 n n C10 H9 93F sing 77 n n C15 H10 93F sing 78 n n C15 H11 93F sing 79 n n C17 H12 93F sing 80 n n C17 H13 93F sing 81 n n C20 H14 93F sing 82 n n C21 H15 93F sing 83 n n C22 H16 93F sing 84 n n C24 H17 93F sing 85 n n C24 H18 93F sing 86 n n C24 H19 93F sing 87 n n C1 H20 93F sing 88 n n C2 H21 93F sing 89 n n C2 H22 93F sing 90 n n C3 H23 93F sing 91 n n C3 H24 93F sing 92 n n C9 H25 93F sing 93 n n C11 H26 93F sing 94 n n C14 H27 93F sing 95 n n C14 H28 93F sing 96 n n C16 H29 93F sing 97 n n C16 H30 93F sing 98 n n C16 H31 93F sing 99 n n C19 H32 93F sing 100 n n # _atom_sites.entry_id 7WC9 _atom_sites.fract_transf_matrix[1][1] 0.02019 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018198 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005559 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 1201 901 MG MG . C 3 CLR A 1 1202 1401 CLR CLR . D 3 CLR A 1 1203 1701 CLR CLR . E 4 OLC A 1 1204 2101 OLC OLC . F 4 OLC A 1 1205 2201 OLC OLC . G 5 93F A 1 1206 2202 93F LIG . H 4 OLC A 1 1207 2203 OLC OLC . I 4 OLC A 1 1208 2204 OLC OLC . J 6 1PE A 1 1209 2205 1PE 1PE . K 7 PEG A 1 1210 2206 PEG PEG . L 7 PEG A 1 1211 2207 PEG PEG . M 4 OLC A 1 1212 2203 OLC OLC . N 4 OLC A 1 1213 2204 OLC OLC . O 3 CLR A 1 1214 2205 CLR CLR . P 8 HOH A 1 1301 4 HOH HOH . P 8 HOH A 2 1302 3 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 93F . . . G 5 -26.592 -12.818 142.608 1 100.14 ? N1 93F 1206 A 1 HETATM 2 N N3 93F . . . G 5 -28.536 -15.48 147.952 1 117.06 ? N3 93F 1206 A 1 HETATM 3 C C4 93F . . . G 5 -27.246 -13.042 141.311 1 87.82 ? C4 93F 1206 A 1 HETATM 4 C C5 93F . . . G 5 -27.467 -11.786 140.479 1 95.25 ? C5 93F 1206 A 1 HETATM 5 C C6 93F . . . G 5 -27.542 -12.283 143.583 1 108.74 ? C6 93F 1206 A 1 HETATM 6 C C7 93F . . . G 5 -26.985 -12.153 145.007 1 113.68 ? C7 93F 1206 A 1 HETATM 7 C C8 93F . . . G 5 -28.087 -12.363 146.023 1 114.71 ? C8 93F 1206 A 1 HETATM 8 C C10 93F . . . G 5 -30.035 -12.109 147.421 1 114.69 ? C10 93F 1206 A 1 HETATM 9 C C13 93F . . . G 5 -27.937 -13.655 146.543 1 122.92 ? C13 93F 1206 A 1 HETATM 10 C C15 93F . . . G 5 -27.44 -16.261 147.355 1 107.3 ? C15 93F 1206 A 1 HETATM 11 C C17 93F . . . G 5 -28.397 -12.017 139.269 1 103.46 ? C17 93F 1206 A 1 HETATM 12 C C20 93F . . . G 5 -31.716 -11.079 140.892 1 128.42 ? C20 93F 1206 A 1 HETATM 13 C C21 93F . . . G 5 -32.576 -11.136 139.828 1 107.92 ? C21 93F 1206 A 1 HETATM 14 C C22 93F . . . G 5 -32.121 -11.505 138.577 1 105.34 ? C22 93F 1206 A 1 HETATM 15 C C24 93F . . . G 5 -30.938 -11.814 135.951 1 118.45 ? C24 93F 1206 A 1 HETATM 16 C C1 93F . . . G 5 -25.967 -13.279 145.446 1 123.17 ? C1 93F 1206 A 1 HETATM 17 C C2 93F . . . G 5 -25.129 -13.852 144.322 1 116.13 ? C2 93F 1206 A 1 HETATM 18 C C3 93F . . . G 5 -25.974 -14.066 143.076 1 99.33 ? C3 93F 1206 A 1 HETATM 19 O O1 93F . . . G 5 -30.227 -12.119 137.159 1 124.11 ? O1 93F 1206 A 1 HETATM 20 C C9 93F . . . G 5 -29.152 -11.583 146.446 1 117.43 ? C9 93F 1206 A 1 HETATM 21 C C11 93F . . . G 5 -29.878 -13.394 147.944 1 113.82 ? C11 93F 1206 A 1 HETATM 22 C C12 93F . . . G 5 -28.808 -14.195 147.51 1 118.52 ? C12 93F 1206 A 1 HETATM 23 N N2 93F . . . G 5 -26.847 -14.322 146.003 1 120.3 ? N2 93F 1206 A 1 HETATM 24 C C14 93F . . . G 5 -26.32 -15.346 146.904 1 115.7 ? C14 93F 1206 A 1 HETATM 25 C C16 93F . . . G 5 -29.305 -16.124 149.017 1 130.07 ? C16 93F 1206 A 1 HETATM 26 C C18 93F . . . G 5 -29.865 -11.714 139.46 1 120.29 ? C18 93F 1206 A 1 HETATM 27 C C19 93F . . . G 5 -30.373 -11.362 140.705 1 138.12 ? C19 93F 1206 A 1 HETATM 28 C C23 93F . . . G 5 -30.773 -11.783 138.382 1 118.96 ? C23 93F 1206 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 227 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #