data_7WC9 # _model_server_result.job_id CoiycNiLe6DrQijq1pk--g _model_server_result.datetime_utc '2024-11-22 20:03:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wc9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":1214}' # _entry.id 7WC9 # _exptl.entry_id 7WC9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 386.654 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7WC9 _cell.length_a 49.53 _cell.length_b 54.95 _cell.length_c 179.88 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WC9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 82 A CYS 148 1_555 A SG CYS 161 A CYS 227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? disulf ? disulf2 A SG CYS 322 A CYS 349 1_555 A SG CYS 326 A CYS 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? metalc ? metalc1 A OE2 GLU 207 A GLU 1008 1_555 B MG MG . A MG 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.947 ? metalc ? metalc2 A OE2 GLU 207 A GLU 1008 1_555 B MG MG . A MG 1201 2_356 ? ? ? ? ? ? ? ? ? ? ? ? 1.944 ? metalc ? metalc3 A OD1 ASP 211 A ASP 1012 1_555 B MG MG . A MG 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.888 ? metalc ? metalc4 A OD2 ASP 211 A ASP 1012 1_555 B MG MG . A MG 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc5 A OD1 ASP 211 A ASP 1012 1_555 B MG MG . A MG 1201 2_356 ? ? ? ? ? ? ? ? ? ? ? ? 2.887 ? metalc ? metalc6 A OD2 ASP 211 A ASP 1012 1_555 B MG MG . A MG 1201 2_356 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 170 n n C1 C10 CLR sing 171 n n C1 H11 CLR sing 172 n n C1 H12 CLR sing 173 n n C2 C3 CLR sing 174 n n C2 H21 CLR sing 175 n n C2 H22 CLR sing 176 n n C3 C4 CLR sing 177 n n C3 O1 CLR sing 178 n n C3 H3 CLR sing 179 n n C4 C5 CLR sing 180 n n C4 H41 CLR sing 181 n n C4 H42 CLR sing 182 n n C5 C6 CLR doub 183 n n C5 C10 CLR sing 184 n n C6 C7 CLR sing 185 n n C6 H6 CLR sing 186 n n C7 C8 CLR sing 187 n n C7 H71 CLR sing 188 n n C7 H72 CLR sing 189 n n C8 C9 CLR sing 190 n n C8 C14 CLR sing 191 n n C8 H8 CLR sing 192 n n C9 C10 CLR sing 193 n n C9 C11 CLR sing 194 n n C9 H9 CLR sing 195 n n C10 C19 CLR sing 196 n n C11 C12 CLR sing 197 n n C11 H111 CLR sing 198 n n C11 H112 CLR sing 199 n n C12 C13 CLR sing 200 n n C12 H121 CLR sing 201 n n C12 H122 CLR sing 202 n n C13 C14 CLR sing 203 n n C13 C17 CLR sing 204 n n C13 C18 CLR sing 205 n n C14 C15 CLR sing 206 n n C14 H14 CLR sing 207 n n C15 C16 CLR sing 208 n n C15 H151 CLR sing 209 n n C15 H152 CLR sing 210 n n C16 C17 CLR sing 211 n n C16 H161 CLR sing 212 n n C16 H162 CLR sing 213 n n C17 C20 CLR sing 214 n n C17 H17 CLR sing 215 n n C18 H181 CLR sing 216 n n C18 H182 CLR sing 217 n n C18 H183 CLR sing 218 n n C19 H191 CLR sing 219 n n C19 H192 CLR sing 220 n n C19 H193 CLR sing 221 n n C20 C21 CLR sing 222 n n C20 C22 CLR sing 223 n n C20 H20 CLR sing 224 n n C21 H211 CLR sing 225 n n C21 H212 CLR sing 226 n n C21 H213 CLR sing 227 n n C22 C23 CLR sing 228 n n C22 H221 CLR sing 229 n n C22 H222 CLR sing 230 n n C23 C24 CLR sing 231 n n C23 H231 CLR sing 232 n n C23 H232 CLR sing 233 n n C24 C25 CLR sing 234 n n C24 H241 CLR sing 235 n n C24 H242 CLR sing 236 n n C25 C26 CLR sing 237 n n C25 C27 CLR sing 238 n n C25 H25 CLR sing 239 n n C26 H261 CLR sing 240 n n C26 H262 CLR sing 241 n n C26 H263 CLR sing 242 n n C27 H271 CLR sing 243 n n C27 H272 CLR sing 244 n n C27 H273 CLR sing 245 n n O1 H1 CLR sing 246 n n # _atom_sites.entry_id 7WC9 _atom_sites.fract_transf_matrix[1][1] 0.02019 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018198 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005559 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 1201 901 MG MG . C 3 CLR A 1 1202 1401 CLR CLR . D 3 CLR A 1 1203 1701 CLR CLR . E 4 OLC A 1 1204 2101 OLC OLC . F 4 OLC A 1 1205 2201 OLC OLC . G 5 93F A 1 1206 2202 93F LIG . H 4 OLC A 1 1207 2203 OLC OLC . I 4 OLC A 1 1208 2204 OLC OLC . J 6 1PE A 1 1209 2205 1PE 1PE . K 7 PEG A 1 1210 2206 PEG PEG . L 7 PEG A 1 1211 2207 PEG PEG . M 4 OLC A 1 1212 2203 OLC OLC . N 4 OLC A 1 1213 2204 OLC OLC . O 3 CLR A 1 1214 2205 CLR CLR . P 8 HOH A 1 1301 4 HOH HOH . P 8 HOH A 2 1302 3 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . O 3 -34.675 4.516 144.883 1 134.48 ? C1 CLR 1214 A 1 HETATM 2 C C2 CLR . . . O 3 -34.936 4.496 146.392 1 131.23 ? C2 CLR 1214 A 1 HETATM 3 C C3 CLR . . . O 3 -34.629 5.823 147.043 1 125.64 ? C3 CLR 1214 A 1 HETATM 4 C C4 CLR . . . O 3 -35.39 6.943 146.362 1 124.17 ? C4 CLR 1214 A 1 HETATM 5 C C5 CLR . . . O 3 -35.178 6.944 144.863 1 126.6 ? C5 CLR 1214 A 1 HETATM 6 C C6 CLR . . . O 3 -34.742 8.032 144.247 1 114.33 ? C6 CLR 1214 A 1 HETATM 7 C C7 CLR . . . O 3 -34.731 8.226 142.766 1 113.58 ? C7 CLR 1214 A 1 HETATM 8 C C8 CLR . . . O 3 -35.368 7.059 142.014 1 119.26 ? C8 CLR 1214 A 1 HETATM 9 C C9 CLR . . . O 3 -34.98 5.717 142.668 1 119.66 ? C9 CLR 1214 A 1 HETATM 10 C C10 CLR . . . O 3 -35.458 5.625 144.143 1 132.35 ? C10 CLR 1214 A 1 HETATM 11 C C11 CLR . . . O 3 -35.418 4.51 141.821 1 117.45 ? C11 CLR 1214 A 1 HETATM 12 C C12 CLR . . . O 3 -35.03 4.61 140.34 1 127.4 ? C12 CLR 1214 A 1 HETATM 13 C C13 CLR . . . O 3 -35.501 5.922 139.697 1 132.13 ? C13 CLR 1214 A 1 HETATM 14 C C14 CLR . . . O 3 -34.923 7.061 140.56 1 124.69 ? C14 CLR 1214 A 1 HETATM 15 C C15 CLR . . . O 3 -35.136 8.321 139.729 1 119.37 ? C15 CLR 1214 A 1 HETATM 16 C C16 CLR . . . O 3 -34.953 7.839 138.281 1 126.96 ? C16 CLR 1214 A 1 HETATM 17 C C17 CLR . . . O 3 -34.889 6.286 138.309 1 136.28 ? C17 CLR 1214 A 1 HETATM 18 C C18 CLR . . . O 3 -37.034 5.965 139.616 1 136.75 ? C18 CLR 1214 A 1 HETATM 19 C C19 CLR . . . O 3 -36.97 5.331 144.224 1 143.85 ? C19 CLR 1214 A 1 HETATM 20 C C20 CLR . . . O 3 -35.456 5.656 137.019 1 142.93 ? C20 CLR 1214 A 1 HETATM 21 C C21 CLR . . . O 3 -34.791 4.33 136.651 1 153.46 ? C21 CLR 1214 A 1 HETATM 22 C C22 CLR . . . O 3 -35.348 6.642 135.844 1 130.8 ? C22 CLR 1214 A 1 HETATM 23 C C23 CLR . . . O 3 -35.753 6.1 134.502 1 123.35 ? C23 CLR 1214 A 1 HETATM 24 O O1 CLR . . . O 3 -34.979 5.768 148.432 1 125.16 ? O1 CLR 1214 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 24 #